RNA–Protein interactions for RNA: ENST00000560789.5

PDE8A-213, Transcript of phosphodiesterase 8A, human

TSL 2

Gene PDE8A, Length 4,664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE8A-213	ENST00000560789	HBD	P02042	147 aa		4.88	□□□□□ -1.63
PDE8A-213	ENST00000560789	LINC00614	P0C842	121 aa		4.88	□□□□□ -1.63
PDE8A-213	ENST00000560789	UQCRFS1	P47985	274 aa		4.88	□□□□□ -1.63
PDE8A-213	ENST00000560789	RNASE6	Q93091	150 aa	Known RBP	4.88	□□□□□ -1.63
PDE8A-213	ENST00000560789	MBNL3	Q9NUK0	354 aa	Known RBP	4.88	□□□□□ -1.63
PDE8A-213	ENST00000560789	FOXA3	P55318	350 aa	Predicted RBP	4.88	□□□□□ -1.63
PDE8A-213	ENST00000560789	PLAUR	Q03405	335 aa		4.88	□□□□□ -1.63
PDE8A-213	ENST00000560789	BSPH1	Q075Z2	132 aa		4.88	□□□□□ -1.63
PDE8A-213	ENST00000560789	FAM27E3	Q08E93	113 aa		4.88	□□□□□ -1.63
PDE8A-213	ENST00000560789	OR5A1	Q8NGJ0	315 aa		4.88	□□□□□ -1.63
PDE8A-213	ENST00000560789	OR9G4	Q8NGQ1	327 aa		4.88	□□□□□ -1.63
PDE8A-213	ENST00000560789	RNF125	Q96EQ8	232 aa		4.88	□□□□□ -1.63
PDE8A-213	ENST00000560789	C2orf88	Q9BSF0	95 aa		4.88	□□□□□ -1.63
PDE8A-213	ENST00000560789	DCTN5	Q9BTE1	182 aa		4.88	□□□□□ -1.63
PDE8A-213	ENST00000560789	WNT10A	Q9GZT5	417 aa		4.88	□□□□□ -1.63
PDE8A-213	ENST00000560789	NLRC5	Q86WI3	1866 aa		4.88	□□□□□ -1.63
PDE8A-213	ENST00000560789	IGHG3	P01860	377 aa		4.88	□□□□□ -1.63
PDE8A-213	ENST00000560789	LMO1	P25800	156 aa		4.88	□□□□□ -1.63
PDE8A-213	ENST00000560789	GPR183	P32249	361 aa		4.88	□□□□□ -1.63
PDE8A-213	ENST00000560789	C19orf54	Q5BKX5	351 aa		4.88	□□□□□ -1.63
PDE8A-213	ENST00000560789	ATP1A1-AS1	Q5TC04	95 aa		4.88	□□□□□ -1.63
PDE8A-213	ENST00000560789	PEAR1	Q5VY43	1037 aa	Predicted RBP	4.88	□□□□□ -1.63
PDE8A-213	ENST00000560789	BMPER	Q8N8U9	685 aa		4.88	□□□□□ -1.63
PDE8A-213	ENST00000560789	MDS2	Q8NDY4	140 aa		4.88	□□□□□ -1.63
PDE8A-213	ENST00000560789	NUP37	Q8NFH4	326 aa		4.88	□□□□□ -1.63
PDE8A-213	ENST00000560789	C1orf147	Q96MC9	270 aa	Predicted RBP	4.88	□□□□□ -1.63
PDE8A-213	ENST00000560789	BRWD1	Q9NSI6	2320 aa		4.88	□□□□□ -1.63
PDE8A-213	ENST00000560789	CACNA1I	Q9P0X4	2223 aa		4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	FOXI3	A8MTJ6	420 aa	Predicted RBP	4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	ZNHIT1	O43257	154 aa		4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	CD55	P08174	381 aa		4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	RSPO4	Q2I0M5	234 aa	Predicted RBP	4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	SPOCK3	Q9BQ16	436 aa		4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	VSIR	Q9H7M9	311 aa		4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	SPRR3	Q9UBC9	169 aa		4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	PSG8	Q9UQ74	426 aa		4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	TDRD6	O60522	2096 aa	Known RBP	4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	LOC107984156	A0A0G2JMH3	177 aa		4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	C7orf71	A4D174	169 aa		4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	PINLYP	A6NC86	204 aa		4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	ORMDL2	Q53FV1	153 aa		4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	FAM90A2P	Q658T7	463 aa		4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	SPSB3	Q6PJ21	355 aa		4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	ARL17A	Q8IVW1	177 aa		4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	SCN8A	Q9UQD0	1980 aa		4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	KIF26B	Q2KJY2	2108 aa		4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	FAM231B	A6NCW3	169 aa		4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789		H3BVH4	76 aa		4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	IGKV1D-33	P01593	117 aa		4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	IGKV1-33	P01594	117 aa		4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	ADCYAP1	P18509	176 aa		4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	GFRA4	Q9GZZ7	299 aa		4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	RNASE7	Q9H1E1	156 aa	Known RBP	4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	HEATR5B	Q9P2D3	2071 aa		4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	RAX	Q9Y2V3	346 aa		4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	RP1L1	Q8IWN7	2480 aa	Predicted RBP	4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789		E9PLN8	166 aa		4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789		J3KRW8	73 aa		4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	IGHV1-46	P01743	117 aa		4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	TYMS	P04818	313 aa		4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789		Q0VG73	95 aa		4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	VKORC1	Q9BQB6	163 aa		4.87	□□□□□ -1.63
PDE8A-213	ENST00000560789	HSD52	Q0P140	79 aa		4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	PRSS8	Q16651	343 aa		4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	ATOH7	Q8N100	152 aa		4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	MGST2	Q99735	147 aa		4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	SLC25A15	Q9Y619	301 aa		4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	PLXNA2	O75051	1894 aa		4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	ALPK2	Q86TB3	2170 aa		4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	MBD3L4	A6NDZ8	208 aa	Predicted RBP	4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	MBD3L3	A6NE82	208 aa	Predicted RBP	4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	OVOL1	O14753	267 aa		4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	GFRA3	O60609	400 aa		4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	IGLV3-1	P01715	115 aa		4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	TRGV3	P03979	118 aa		4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	SNRPC	P09234	159 aa	Known RBP	4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	PCP4	P48539	62 aa		4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	SRSF1	Q07955	248 aa	Known RBP eCLIP	4.86	□□□□□ -1.63	5e-7	■■■■□ 25.1
PDE8A-213	ENST00000560789	MINOS1	Q5TGZ0	78 aa		4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	WFDC3	Q8IUB2	231 aa		4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	C14orf144	Q96I85	54 aa		4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	SCGB3A1	Q96QR1	104 aa		4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	MINOS1-NBL1	R4GNA1	71 aa		4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	C15orf62	A8K5M9	175 aa		4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	PSPN	O60542	156 aa		4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	WNT2	P09544	360 aa		4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	ADIPOQ	Q15848	244 aa		4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	TMEM249	Q2WGJ8	235 aa		4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	CT83	Q5H943	113 aa		4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	NUDT10	Q8NFP7	164 aa		4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	NUDT11	Q96G61	164 aa		4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	SCN5A	Q14524	2016 aa		4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	RALGAPA1	Q6GYQ0	2036 aa		4.86	□□□□□ -1.63
PDE8A-213	ENST00000560789	PTPRZ1	P23471	2315 aa	Predicted RBP	4.85	□□□□□ -1.63
PDE8A-213	ENST00000560789		A0A1B0GWJ7	208 aa		4.85	□□□□□ -1.63
PDE8A-213	ENST00000560789		H3BTX0	84 aa		4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms