RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 ZNF727A8MUV8 499 aa14.22□□□□□ -0.13
SNX1-208ENST00000559844 ODF3BA8MYP8 253 aa14.22□□□□□ -0.13
SNX1-208ENST00000559844 MT-ND4LP03901 98 aa14.22□□□□□ -0.13
SNX1-208ENST00000559844 LINC00869P0C866 280 aa14.22□□□□□ -0.13
SNX1-208ENST00000559844 PAX2Q02962 417 aa14.22□□□□□ -0.13
SNX1-208ENST00000559844 TNXAQ16473 311 aa14.22□□□□□ -0.13
SNX1-208ENST00000559844 ZNF114Q8NC26 417 aa14.22□□□□□ -0.13
SNX1-208ENST00000559844 OR4F5Q8NH21 305 aa14.22□□□□□ -0.13
SNX1-208ENST00000559844 OR4F4Q96R69 305 aa14.22□□□□□ -0.13
SNX1-208ENST00000559844 SDF2L1Q9HCN8 221 aa14.22□□□□□ -0.13
SNX1-208ENST00000559844 MLXQ9UH92 298 aa14.22□□□□□ -0.13
SNX1-208ENST00000559844 FOLR2P14207 255 aa14.22□□□□□ -0.13
SNX1-208ENST00000559844 OR10J1P30954 320 aa14.22□□□□□ -0.13
SNX1-208ENST00000559844 CYB5R2Q6BCY4 276 aa14.22□□□□□ -0.13
SNX1-208ENST00000559844 ETFRF1Q6IPR1 90 aa14.22□□□□□ -0.13
SNX1-208ENST00000559844 PPP1R27Q86WC6 154 aa14.22□□□□□ -0.13
SNX1-208ENST00000559844 HIF1ANQ9NWT6 349 aa14.22□□□□□ -0.13
SNX1-208ENST00000559844 NAT8Q9UHE5 227 aa14.22□□□□□ -0.13
SNX1-208ENST00000559844 TRAV20A0A0B4J274 112 aa14.21□□□□□ -0.13
SNX1-208ENST00000559844 OR2C1O95371 312 aa14.21□□□□□ -0.13
SNX1-208ENST00000559844 ARL14EPLP0DKL9 152 aa14.21□□□□□ -0.13
SNX1-208ENST00000559844 CNTFRP26992 372 aa14.21□□□□□ -0.13
SNX1-208ENST00000559844 COMPP49747 757 aaPredicted RBP14.21□□□□□ -0.13
SNX1-208ENST00000559844 RNF212Q495C1 297 aa14.21□□□□□ -0.13
SNX1-208ENST00000559844 ABHD5Q8WTS1 349 aa14.21□□□□□ -0.13
SNX1-208ENST00000559844 GATAD1Q8WUU5 269 aa14.21□□□□□ -0.13
SNX1-208ENST00000559844 HIST1H2BAQ96A08 127 aa14.21□□□□□ -0.13
SNX1-208ENST00000559844 IGLC7A0M8Q6 106 aa14.2□□□□□ -0.14
SNX1-208ENST00000559844 TIMM23O14925 209 aa14.2□□□□□ -0.14
SNX1-208ENST00000559844 PDE6DO43924 150 aa14.2□□□□□ -0.14
SNX1-208ENST00000559844 PVRIGQ6DKI7 326 aa14.2□□□□□ -0.14
SNX1-208ENST00000559844 HCP5Q6MZN7 132 aa14.2□□□□□ -0.14
SNX1-208ENST00000559844 SMIM7Q9BQ49 75 aa14.2□□□□□ -0.14
SNX1-208ENST00000559844 MAST4O15021 2626 aa14.2□□□□□ -0.14
SNX1-208ENST00000559844 IGKV1OR2-108A0A075B7D4 117 aa14.2□□□□□ -0.14
SNX1-208ENST00000559844 CXorf65A6NEN9 183 aa14.2□□□□□ -0.14
SNX1-208ENST00000559844 OOSP1A8MZH6 123 aa14.2□□□□□ -0.14
SNX1-208ENST00000559844 C11orf94C9JXX5 98 aa14.2□□□□□ -0.14
SNX1-208ENST00000559844 F6UZH7 168 aa14.2□□□□□ -0.14
SNX1-208ENST00000559844 TSPAN9O75954 239 aa14.2□□□□□ -0.14
SNX1-208ENST00000559844 VENTXO95231 258 aa14.2□□□□□ -0.14
SNX1-208ENST00000559844 HABP2Q14520 560 aaPredicted RBP14.2□□□□□ -0.14
SNX1-208ENST00000559844 CYP2G1PQ6ZSU1 146 aa14.2□□□□□ -0.14
SNX1-208ENST00000559844 ISOC2Q96AB3 205 aa14.2□□□□□ -0.14
SNX1-208ENST00000559844 PRELID1Q9Y255 219 aa14.2□□□□□ -0.14
SNX1-208ENST00000559844 CORTO00230 105 aa14.19□□□□□ -0.14
SNX1-208ENST00000559844 CRYBA1P05813 215 aa14.19□□□□□ -0.14
SNX1-208ENST00000559844 CD99P14209 185 aa14.19□□□□□ -0.14
SNX1-208ENST00000559844 KLRD1Q13241 179 aa14.19□□□□□ -0.14
SNX1-208ENST00000559844 MLANAQ16655 118 aa14.19□□□□□ -0.14
SNX1-208ENST00000559844 TMEM241Q24JQ0 296 aa14.19□□□□□ -0.14
SNX1-208ENST00000559844 VMO1Q7Z5L0 202 aa14.19□□□□□ -0.14
SNX1-208ENST00000559844 ACY3Q96HD9 319 aa14.19□□□□□ -0.14
SNX1-208ENST00000559844 RNF2Q99496 336 aa14.19□□□□□ -0.14
SNX1-208ENST00000559844 SRSF8Q9BRL6 282 aaKnown RBP14.19□□□□□ -0.14
SNX1-208ENST00000559844 TMUB1Q9BVT8 246 aa14.19□□□□□ -0.14
SNX1-208ENST00000559844 SEPSECSQ9HD40 501 aaKnown RBP14.19□□□□□ -0.14
SNX1-208ENST00000559844 FUT9Q9Y231 359 aa14.19□□□□□ -0.14
SNX1-208ENST00000559844 HIVEP1P15822 2718 aa14.18□□□□□ -0.14
SNX1-208ENST00000559844 GCHFRP30047 84 aa14.18□□□□□ -0.14
SNX1-208ENST00000559844 PLGLAQ15195 96 aa14.18□□□□□ -0.14
SNX1-208ENST00000559844 LDLRAD2Q5SZI1 272 aa14.18□□□□□ -0.14
SNX1-208ENST00000559844 MINOS1Q5TGZ0 78 aa14.18□□□□□ -0.14
SNX1-208ENST00000559844 CCDC144NLQ6NUI1 221 aa14.18□□□□□ -0.14
SNX1-208ENST00000559844 OR2T6Q8NHC8 308 aa14.18□□□□□ -0.14
SNX1-208ENST00000559844 CFHR4Q92496 578 aa14.18□□□□□ -0.14
SNX1-208ENST00000559844 FBXL15Q9H469 300 aa14.18□□□□□ -0.14
SNX1-208ENST00000559844 MINOS1-NBL1R4GNA1 71 aa14.18□□□□□ -0.14
SNX1-208ENST00000559844 CLN5O75503 358 aa14.18□□□□□ -0.14
SNX1-208ENST00000559844 GNB1P62873 340 aa14.18□□□□□ -0.14
SNX1-208ENST00000559844 KRTAP1-1Q07627 177 aa14.18□□□□□ -0.14
SNX1-208ENST00000559844 FAM78BQ5VT40 261 aa14.18□□□□□ -0.14
SNX1-208ENST00000559844 CST9LP1Q5W188 147 aa14.18□□□□□ -0.14
SNX1-208ENST00000559844 RPUSD4Q96CM3 377 aaKnown RBP14.18□□□□□ -0.14
SNX1-208ENST00000559844 PARLQ9H300 379 aa14.18□□□□□ -0.14
SNX1-208ENST00000559844 FNDC4Q9H6D8 234 aaPredicted RBP14.18□□□□□ -0.14
SNX1-208ENST00000559844 TMEM242Q9NWH2 141 aa14.18□□□□□ -0.14
SNX1-208ENST00000559844 HILPDAQ9Y5L2 63 aa14.18□□□□□ -0.14
SNX1-208ENST00000559844 MOSP00540 346 aa14.17□□□□□ -0.14
SNX1-208ENST00000559844 GATA3P23771 443 aa14.17□□□□□ -0.14
SNX1-208ENST00000559844 TAS2R45P59539 299 aa14.17□□□□□ -0.14
SNX1-208ENST00000559844 ZNF674Q2M3X9 581 aa14.17□□□□□ -0.14
SNX1-208ENST00000559844 FAM24BQ8N5W8 94 aa14.17□□□□□ -0.14
SNX1-208ENST00000559844 THAP8Q8NA92 274 aa14.17□□□□□ -0.14
SNX1-208ENST00000559844 OR1P1Q8NH06 330 aa14.17□□□□□ -0.14
SNX1-208ENST00000559844 SMR3AQ99954 134 aa14.17□□□□□ -0.14
SNX1-208ENST00000559844 MRPL32Q9BYC8 188 aaKnown RBP14.17□□□□□ -0.14
SNX1-208ENST00000559844 TECRQ9NZ01 308 aaKnown RBP14.17□□□□□ -0.14
SNX1-208ENST00000559844 REG1AP05451 166 aa14.16□□□□□ -0.14
SNX1-208ENST00000559844 OR5G3P0C626 314 aa14.16□□□□□ -0.14
SNX1-208ENST00000559844 UBE2G2P60604 165 aa14.16□□□□□ -0.14
SNX1-208ENST00000559844 PAX8Q06710 450 aa14.16□□□□□ -0.14
SNX1-208ENST00000559844 SPATA31B1PQ5VZV4 182 aa14.16□□□□□ -0.14
SNX1-208ENST00000559844 NPBQ8NG41 125 aa14.16□□□□□ -0.14
SNX1-208ENST00000559844 C22orf15Q8WYQ4 148 aa14.16□□□□□ -0.14
SNX1-208ENST00000559844 CTDSP1Q9GZU7 261 aa14.16□□□□□ -0.14
SNX1-208ENST00000559844 SIRPDQ9H106 197 aa14.16□□□□□ -0.14
SNX1-208ENST00000559844 C7orf69Q9H7B7 122 aa14.16□□□□□ -0.14
SNX1-208ENST00000559844 F8P00451 2351 aa14.16□□□□□ -0.14
SNX1-208ENST00000559844 NBR2O15453 112 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms