RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 PDCD10Q9BUL8 212 aa5.99□□□□□ -1.45
TRAF3-205ENST00000558700 UBQLN2Q9UHD9 624 aa5.99□□□□□ -1.45
TRAF3-205ENST00000558700 IGHV3OR16-8A0A075B7F1 116 aa5.98□□□□□ -1.45
TRAF3-205ENST00000558700 IGHV7-4-1A0A0J9YVY3 117 aa5.98□□□□□ -1.45
TRAF3-205ENST00000558700 CXorf65A6NEN9 183 aa5.98□□□□□ -1.45
TRAF3-205ENST00000558700 I3L2K1 104 aa5.98□□□□□ -1.45
TRAF3-205ENST00000558700 CORTO00230 105 aa5.98□□□□□ -1.45
TRAF3-205ENST00000558700 SPRY2O43597 315 aa5.98□□□□□ -1.45
TRAF3-205ENST00000558700 ZNF207O43670 478 aaKnown RBP5.98□□□□□ -1.45
TRAF3-205ENST00000558700 SCGB2A1O75556 95 aa5.98□□□□□ -1.45
TRAF3-205ENST00000558700 YIF1AO95070 293 aa5.98□□□□□ -1.45
TRAF3-205ENST00000558700 MT-CO2P00403 227 aa5.98□□□□□ -1.45
TRAF3-205ENST00000558700 IGKV1-39P01597 117 aa5.98□□□□□ -1.45
TRAF3-205ENST00000558700 IGKV1D-39P04432 117 aa5.98□□□□□ -1.45
TRAF3-205ENST00000558700 CTSGP08311 255 aa5.98□□□□□ -1.45
TRAF3-205ENST00000558700 SNCAP37840 140 aa5.98□□□□□ -1.45
TRAF3-205ENST00000558700 HOXA1P49639 335 aaPredicted RBP5.98□□□□□ -1.45
TRAF3-205ENST00000558700 PPP5CP53041 499 aa5.98□□□□□ -1.45
TRAF3-205ENST00000558700 PIGPP57054 158 aa5.98□□□□□ -1.45
TRAF3-205ENST00000558700 HSPE1P61604 102 aaKnown RBP5.98□□□□□ -1.45
TRAF3-205ENST00000558700 TMEM217Q8N7C4 229 aa5.98□□□□□ -1.45
TRAF3-205ENST00000558700 CCDC71LQ8N9Z2 235 aa5.98□□□□□ -1.45
TRAF3-205ENST00000558700 TMEM116Q8NCL8 245 aa5.98□□□□□ -1.45
TRAF3-205ENST00000558700 PINX1Q96BK5 328 aaKnown RBP5.98□□□□□ -1.45
TRAF3-205ENST00000558700 GALNT14Q96FL9 552 aa5.98□□□□□ -1.45
TRAF3-205ENST00000558700 OR10C1Q96KK4 312 aa5.98□□□□□ -1.45
TRAF3-205ENST00000558700 RHPN1-AS1Q9BWJ2 59 aa5.98□□□□□ -1.45
TRAF3-205ENST00000558700 NXF2Q9GZY0 626 aaKnown RBP5.98□□□□□ -1.45
TRAF3-205ENST00000558700 EXTL2Q9UBQ6 330 aa5.98□□□□□ -1.45
TRAF3-205ENST00000558700 SMPXQ9UHP9 88 aa5.98□□□□□ -1.45
TRAF3-205ENST00000558700 CSMD3Q7Z407 3707 aa5.98□□□□□ -1.45
TRAF3-205ENST00000558700 A0A0J9YWU9 116 aa5.97□□□□□ -1.45
TRAF3-205ENST00000558700 INS-IGF2F8WCM5 200 aa5.97□□□□□ -1.45
TRAF3-205ENST00000558700 CHEK1O14757 476 aa5.97□□□□□ -1.45
TRAF3-205ENST00000558700 B3GALNT1O75752 331 aa5.97□□□□□ -1.45
TRAF3-205ENST00000558700 CD3DP04234 171 aa5.97□□□□□ -1.45
TRAF3-205ENST00000558700 CD5P06127 495 aa5.97□□□□□ -1.45
TRAF3-205ENST00000558700 ZNF182P17025 639 aaPredicted RBP5.97□□□□□ -1.45
TRAF3-205ENST00000558700 NPBWR1P48145 328 aa5.97□□□□□ -1.45
TRAF3-205ENST00000558700 CMC4P56277 68 aaPredicted RBP5.97□□□□□ -1.45
TRAF3-205ENST00000558700 MRPS10P82664 201 aaKnown RBP5.97□□□□□ -1.45
TRAF3-205ENST00000558700 TNFRSF9Q07011 255 aa5.97□□□□□ -1.45
TRAF3-205ENST00000558700 TRIM16LQ309B1 348 aa5.97□□□□□ -1.45
TRAF3-205ENST00000558700 LYG2Q86SG7 212 aa5.97□□□□□ -1.45
TRAF3-205ENST00000558700 LHFPL1Q86WI0 220 aa5.97□□□□□ -1.45
TRAF3-205ENST00000558700 DUSP18Q8NEJ0 188 aa5.97□□□□□ -1.45
TRAF3-205ENST00000558700 OR52I2Q8NH67 350 aa5.97□□□□□ -1.45
TRAF3-205ENST00000558700 RNASE11Q8TAA1 199 aaKnown RBP5.97□□□□□ -1.45
TRAF3-205ENST00000558700 ZFAND1Q8TCF1 268 aa5.97□□□□□ -1.45
TRAF3-205ENST00000558700 NEU1Q99519 415 aa5.97□□□□□ -1.45
TRAF3-205ENST00000558700 TMEM231Q9H6L2 316 aa5.97□□□□□ -1.45
TRAF3-205ENST00000558700 ENY2Q9NPA8 101 aa5.97□□□□□ -1.45
TRAF3-205ENST00000558700 PPP1R14DQ9NXH3 145 aa5.97□□□□□ -1.45
TRAF3-205ENST00000558700 COPZ2Q9P299 210 aa5.97□□□□□ -1.45
TRAF3-205ENST00000558700 SACSQ9NZJ4 4579 aa5.97□□□□□ -1.45
TRAF3-205ENST00000558700 C3orf85A0A1B0GTC6 90 aa5.96□□□□□ -1.46
TRAF3-205ENST00000558700 RAB3DO95716 219 aa5.96□□□□□ -1.46
TRAF3-205ENST00000558700 IFNA17P01571 189 aa5.96□□□□□ -1.46
TRAF3-205ENST00000558700 IGKV1-5P01602 117 aa5.96□□□□□ -1.46
TRAF3-205ENST00000558700 P0C879 139 aa5.96□□□□□ -1.46
TRAF3-205ENST00000558700 RPL35AP18077 110 aaKnown RBP5.96□□□□□ -1.46
TRAF3-205ENST00000558700 SUB1P53999 127 aaKnown RBP eCLIP5.96□□□□□ -1.46
TRAF3-205ENST00000558700 LINC00310P59036 64 aa5.96□□□□□ -1.46
TRAF3-205ENST00000558700 TAS2R19P59542 299 aa5.96□□□□□ -1.46
TRAF3-205ENST00000558700 SSBP1Q04837 148 aaKnown RBP5.96□□□□□ -1.46
TRAF3-205ENST00000558700 CTF1Q16619 201 aa5.96□□□□□ -1.46
TRAF3-205ENST00000558700 SCGB2B2Q4G0G5 96 aa5.96□□□□□ -1.46
TRAF3-205ENST00000558700 SPINK9Q5DT21 86 aa5.96□□□□□ -1.46
TRAF3-205ENST00000558700 ZNF600Q6ZNG1 722 aa5.96□□□□□ -1.46
TRAF3-205ENST00000558700 OR13C8Q8NGS7 320 aa5.96□□□□□ -1.46
TRAF3-205ENST00000558700 LINC00476Q8WZB0 136 aa5.96□□□□□ -1.46
TRAF3-205ENST00000558700 RNF183Q96D59 192 aa5.96□□□□□ -1.46
TRAF3-205ENST00000558700 RRNAD1Q96FB5 475 aaKnown RBP5.96□□□□□ -1.46
TRAF3-205ENST00000558700 TP53RKQ96S44 253 aa5.96□□□□□ -1.46
TRAF3-205ENST00000558700 RNF2Q99496 336 aa5.96□□□□□ -1.46
TRAF3-205ENST00000558700 MAP6D1Q9H9H5 199 aa5.96□□□□□ -1.46
TRAF3-205ENST00000558700 KLK11Q9UBX7 282 aa5.96□□□□□ -1.46
TRAF3-205ENST00000558700 MTFP1Q9UDX5 166 aa5.96□□□□□ -1.46
TRAF3-205ENST00000558700 LYSTQ99698 3801 aa5.96□□□□□ -1.46
TRAF3-205ENST00000558700 IGKV3-7A0A075B6H7 116 aa5.95□□□□□ -1.46
TRAF3-205ENST00000558700 IGHV3-49A0A0A0MS15 119 aa5.95□□□□□ -1.46
TRAF3-205ENST00000558700 TRAV14DV4A0A0A6YYC5 116 aa5.95□□□□□ -1.46
TRAF3-205ENST00000558700 GABARAPH6UMI1 98 aa5.95□□□□□ -1.46
TRAF3-205ENST00000558700 ST8SIA3O43173 380 aa5.95□□□□□ -1.46
TRAF3-205ENST00000558700 IGHV3-48P01763 117 aa5.95□□□□□ -1.46
TRAF3-205ENST00000558700 CD74P04233 296 aa5.95□□□□□ -1.46
TRAF3-205ENST00000558700 SMIM18P0DKX4 95 aa5.95□□□□□ -1.46
TRAF3-205ENST00000558700 UCP1P25874 307 aa5.95□□□□□ -1.46
TRAF3-205ENST00000558700 OPRK1P41145 380 aa5.95□□□□□ -1.46
TRAF3-205ENST00000558700 TFPI2P48307 235 aa5.95□□□□□ -1.46
TRAF3-205ENST00000558700 PAFAH1B2P68402 229 aa5.95□□□□□ -1.46
TRAF3-205ENST00000558700 MEF2DQ14814 521 aa5.95□□□□□ -1.46
TRAF3-205ENST00000558700 IZUMO4Q1ZYL8 232 aa5.95□□□□□ -1.46
TRAF3-205ENST00000558700 GPR107Q5VW38 600 aa5.95□□□□□ -1.46
TRAF3-205ENST00000558700 STEAP1BQ6NZ63 245 aa5.95□□□□□ -1.46
TRAF3-205ENST00000558700 TCF24Q7RTU0 167 aa5.95□□□□□ -1.46
TRAF3-205ENST00000558700 FAM219AQ8IW50 185 aa5.95□□□□□ -1.46
TRAF3-205ENST00000558700 TMEM229BQ8NBD8 167 aa5.95□□□□□ -1.46
TRAF3-205ENST00000558700 GATAD1Q8WUU5 269 aa5.95□□□□□ -1.46
TRAF3-205ENST00000558700 NARS2Q96I59 477 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms