RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 SHISA9B4DS77 424 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 NDUFC2-KCTD14E9PQ53 114 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 KRTAP4-16G5E9R7 235 aaPredicted RBP2.96□□□□□ -1.94
LRRC28-205ENST00000558248 H3BSA7 217 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 K7EP13 123 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 LGALS9O00182 355 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 ISLRO14498 428 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 SS18L1O75177 396 aaPredicted RBP2.96□□□□□ -1.94
LRRC28-205ENST00000558248 POP7O75817 140 aaKnown RBP2.96□□□□□ -1.94
LRRC28-205ENST00000558248 LGALS1P09382 135 aaKnown RBP2.96□□□□□ -1.94
LRRC28-205ENST00000558248 TFPTP0C1Z6 253 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 OR12D1P0DN82 309 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 FAM236CP0DP71 79 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 COX4I1P13073 169 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 GPX2P18283 190 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 CDK2P24941 298 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 HSPA9P38646 679 aaKnown RBP2.96□□□□□ -1.94
LRRC28-205ENST00000558248 SPINT3P49223 89 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 PSMB3P49720 205 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 TBPL1P62380 186 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 RPS28P62857 69 aaKnown RBP2.96□□□□□ -1.94
LRRC28-205ENST00000558248 RUNX1Q01196 453 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 FABP9Q0Z7S8 132 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 SMIM21Q3B7S5 101 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 ATP5L2Q7Z4Y8 100 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 ANKRD29Q8N6D5 301 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 GDPD1Q8N9F7 314 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 NPBQ8NG41 125 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 OR8J3Q8NGG0 315 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 OR10G4Q8NGN3 311 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 OR2T4Q8NH00 348 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 FRZBQ92765 325 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 GHSRQ92847 366 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 FAM104AQ969W3 186 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 PTX4Q96A99 478 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 MALSU1Q96EH3 234 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 IMMP1LQ96LU5 166 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 SEC22CQ9BRL7 303 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 PAXXQ9BUH6 204 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 REG4Q9BYZ8 158 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 MMP26Q9NRE1 261 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 KLF13Q9Y2Y9 288 aaPredicted RBP2.96□□□□□ -1.94
LRRC28-205ENST00000558248 FAM215AQ9Y5M1 114 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 RFNGQ9Y644 331 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 DSCAMO60469 2012 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 CR1P17927 2039 aa2.96□□□□□ -1.94
LRRC28-205ENST00000558248 HEATR5AQ86XA9 2040 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 ZNF407Q9C0G0 2248 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 A0A087X002 238 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 BORCS7-ASMTA0A0B4J1R7 106 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 TRAV26-2A0A0B4J265 109 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 A0A1B0GX78 115 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 ZNF850A8MQ14 1090 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 KRBOX1C9JBD0 128 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 F8W036 122 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 INMT-MINDY4F8WBC2 141 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.95□□□□□ -1.94
LRRC28-205ENST00000558248 H7C423 109 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 HMGB3O15347 200 aaKnown RBP2.95□□□□□ -1.94
LRRC28-205ENST00000558248 TNFSF13O75888 250 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 CRYZL1O95825 349 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 IGHMP01871 453 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 HLA-DRB1P01911 266 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 SOD3P08294 240 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 IL3RAP26951 378 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 OR10J1P30954 320 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 GLRXP35754 106 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 POLR2IP36954 125 aaKnown RBP2.95□□□□□ -1.94
LRRC28-205ENST00000558248 CKS1BP61024 79 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 MAXP61244 160 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 CDK5Q00535 292 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 CAV1Q03135 178 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 DAZ2Q13117 558 aaKnown RBP2.95□□□□□ -1.94
LRRC28-205ENST00000558248 IL15RAQ13261 267 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 SSX1Q16384 188 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 RSPO1Q2MKA7 263 aaPredicted RBP2.95□□□□□ -1.94
LRRC28-205ENST00000558248 ZNF773Q6PK81 442 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 ACP7Q6ZNF0 438 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 FAM19A3Q7Z5A8 133 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 DAZ4Q86SG3 579 aaKnown RBP2.95□□□□□ -1.94
LRRC28-205ENST00000558248 PRNTQ86SH4 94 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 LINC00596Q86U02 117 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 ZNF440Q8IYI8 595 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 OSR2Q8N2R0 312 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 OR4D11Q8NGI4 311 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 OR5H2Q8NGV7 314 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 LHFPL5Q8TAF8 219 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 C1orf54Q8WWF1 131 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 MBD3L1Q8WWY6 194 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 LCN9Q8WX39 176 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 RNASE6Q93091 150 aaKnown RBP2.95□□□□□ -1.94
LRRC28-205ENST00000558248 APOBEC3DQ96AK3 386 aaPredicted RBP2.95□□□□□ -1.94
LRRC28-205ENST00000558248 L3HYPDHQ96EM0 354 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 TMEM101Q96IK0 257 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 VSIG2Q96IQ7 327 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 CAPZA3Q96KX2 299 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 ZNF285Q96NJ3 590 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 CAMK2N2Q96S95 79 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 CCL19Q99731 98 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 PBOV1Q9GZY1 135 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms