RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 HTR2BP41595 481 aa9.3□□□□□ -0.92
HMGB1P8-201ENST00000558211 CDX1P47902 265 aaPredicted RBP9.3□□□□□ -0.92
HMGB1P8-201ENST00000558211 FCN2Q15485 313 aa9.3□□□□□ -0.92
HMGB1P8-201ENST00000558211 DEFB136Q30KP8 78 aa9.3□□□□□ -0.92
HMGB1P8-201ENST00000558211 C15orf32Q32M92 178 aa9.3□□□□□ -0.92
HMGB1P8-201ENST00000558211 LCE4AQ5TA78 99 aa9.3□□□□□ -0.92
HMGB1P8-201ENST00000558211 NECAP1Q8NC96 275 aa9.3□□□□□ -0.92
HMGB1P8-201ENST00000558211 SLC24A4Q8NFF2 622 aa9.3□□□□□ -0.92
HMGB1P8-201ENST00000558211 OR1P1Q8NH06 330 aa9.3□□□□□ -0.92
HMGB1P8-201ENST00000558211 SPATA3Q8NHX4 192 aa9.3□□□□□ -0.92
HMGB1P8-201ENST00000558211 THYN1Q9P016 225 aa9.3□□□□□ -0.92
HMGB1P8-201ENST00000558211 RCL1Q9Y2P8 373 aaKnown RBP9.3□□□□□ -0.92
HMGB1P8-201ENST00000558211 MFSD2BA6NFX1 497 aa9.29□□□□□ -0.92
HMGB1P8-201ENST00000558211 FAM223BA6NKX1 122 aa9.29□□□□□ -0.92
HMGB1P8-201ENST00000558211 H3BP45 60 aa9.29□□□□□ -0.92
HMGB1P8-201ENST00000558211 BRI3O95415 125 aa9.29□□□□□ -0.92
HMGB1P8-201ENST00000558211 IGHV3-48P01763 117 aa9.29□□□□□ -0.92
HMGB1P8-201ENST00000558211 CXCL3P19876 107 aa9.29□□□□□ -0.92
HMGB1P8-201ENST00000558211 NPY1RP25929 384 aa9.29□□□□□ -0.92
HMGB1P8-201ENST00000558211 H2BFSP57053 126 aa9.29□□□□□ -0.92
HMGB1P8-201ENST00000558211 RAB32Q13637 225 aa9.29□□□□□ -0.92
HMGB1P8-201ENST00000558211 EXOSC2Q13868 293 aaKnown RBP9.29□□□□□ -0.92
HMGB1P8-201ENST00000558211 LRRC37A5PQ49AS3 106 aa9.29□□□□□ -0.92
HMGB1P8-201ENST00000558211 SPANXN5Q5MJ07 72 aa9.29□□□□□ -0.92
HMGB1P8-201ENST00000558211 FAM223AQ8IWN6 122 aa9.29□□□□□ -0.92
HMGB1P8-201ENST00000558211 ZNF114Q8NC26 417 aa9.29□□□□□ -0.92
HMGB1P8-201ENST00000558211 OR1L6Q8NGR2 347 aa9.29□□□□□ -0.92
HMGB1P8-201ENST00000558211 MYOZ3Q8TDC0 251 aa9.29□□□□□ -0.92
HMGB1P8-201ENST00000558211 USMG5Q96IX5 58 aa9.29□□□□□ -0.92
HMGB1P8-201ENST00000558211 CIB3Q96Q77 187 aaPredicted RBP9.29□□□□□ -0.92
HMGB1P8-201ENST00000558211 PSENENQ9NZ42 101 aa9.29□□□□□ -0.92
HMGB1P8-201ENST00000558211 U3KQ87 197 aa9.29□□□□□ -0.92
HMGB1P8-201ENST00000558211 WNK1Q9H4A3 2382 aa9.28□□□□□ -0.92
HMGB1P8-201ENST00000558211 K7EPK0 472 aa9.28□□□□□ -0.92
HMGB1P8-201ENST00000558211 L7N2F9 121 aa9.28□□□□□ -0.92
HMGB1P8-201ENST00000558211 LY86O95711 162 aa9.28□□□□□ -0.92
HMGB1P8-201ENST00000558211 MT-CO2P00403 227 aa9.28□□□□□ -0.92
HMGB1P8-201ENST00000558211 IFNA4P05014 189 aa9.28□□□□□ -0.92
HMGB1P8-201ENST00000558211 LGALS1P09382 135 aaKnown RBP9.28□□□□□ -0.92
HMGB1P8-201ENST00000558211 RRAS2P62070 204 aaPredicted RBP9.28□□□□□ -0.92
HMGB1P8-201ENST00000558211 VAMP2P63027 116 aa9.28□□□□□ -0.92
HMGB1P8-201ENST00000558211 C2orf83Q53S99 150 aa9.28□□□□□ -0.92
HMGB1P8-201ENST00000558211 UBAC2Q8NBM4 344 aa9.28□□□□□ -0.92
HMGB1P8-201ENST00000558211 OR11H7Q8NGC8 314 aa9.28□□□□□ -0.92
HMGB1P8-201ENST00000558211 C4orf3Q8WVX3 66 aa9.28□□□□□ -0.92
HMGB1P8-201ENST00000558211 DPF1Q92782 380 aa9.28□□□□□ -0.92
HMGB1P8-201ENST00000558211 EEF1AKMT3Q96AZ1 226 aa9.28□□□□□ -0.92
HMGB1P8-201ENST00000558211 I3L521 148 aa9.27□□□□□ -0.93
HMGB1P8-201ENST00000558211 M0QZ24 198 aa9.27□□□□□ -0.93
HMGB1P8-201ENST00000558211 TRBV12-3P01733 135 aa9.27□□□□□ -0.93
HMGB1P8-201ENST00000558211 OR8U8P0C7N1 319 aa9.27□□□□□ -0.93
HMGB1P8-201ENST00000558211 OPRK1P41145 380 aa9.27□□□□□ -0.93
HMGB1P8-201ENST00000558211 BCAP31P51572 246 aa9.27□□□□□ -0.93
HMGB1P8-201ENST00000558211 RAB11AP62491 216 aa9.27□□□□□ -0.93
HMGB1P8-201ENST00000558211 RPP30P78346 268 aaKnown RBP9.27□□□□□ -0.93
HMGB1P8-201ENST00000558211 CYCSP99999 105 aaKnown RBP9.27□□□□□ -0.93
HMGB1P8-201ENST00000558211 CD69Q07108 199 aa9.27□□□□□ -0.93
HMGB1P8-201ENST00000558211 IL15RAQ13261 267 aa9.27□□□□□ -0.93
HMGB1P8-201ENST00000558211 BSXQ3C1V8 233 aa9.27□□□□□ -0.93
HMGB1P8-201ENST00000558211 CLEC19AQ6UXS0 136 aa9.27□□□□□ -0.93
HMGB1P8-201ENST00000558211 NOXA1Q86UR1 476 aa9.27□□□□□ -0.93
HMGB1P8-201ENST00000558211 OR11H1Q8NG94 326 aa9.27□□□□□ -0.93
HMGB1P8-201ENST00000558211 OR1N2Q8NGR9 330 aa9.27□□□□□ -0.93
HMGB1P8-201ENST00000558211 SCARB1Q8WTV0 552 aa9.27□□□□□ -0.93
HMGB1P8-201ENST00000558211 TMEM170AQ8WVE7 144 aa9.27□□□□□ -0.93
HMGB1P8-201ENST00000558211 CXorf58Q96LI9 332 aa9.27□□□□□ -0.93
HMGB1P8-201ENST00000558211 NMES1Q9C002 83 aa9.27□□□□□ -0.93
HMGB1P8-201ENST00000558211 ZC4H2Q9NQZ6 224 aa9.27□□□□□ -0.93
HMGB1P8-201ENST00000558211 STRAPQ9Y3F4 350 aaKnown RBP9.27□□□□□ -0.93
HMGB1P8-201ENST00000558211 IGHV4OR15-8A0A075B7B6 117 aa9.26□□□□□ -0.93
HMGB1P8-201ENST00000558211 A0A087WW49 117 aa9.26□□□□□ -0.93
HMGB1P8-201ENST00000558211 C15orf62A8K5M9 175 aa9.26□□□□□ -0.93
HMGB1P8-201ENST00000558211 PPP5D1E7EU14 171 aa9.26□□□□□ -0.93
HMGB1P8-201ENST00000558211 I3L2K1 104 aa9.26□□□□□ -0.93
HMGB1P8-201ENST00000558211 K7EIM0 57 aa9.26□□□□□ -0.93
HMGB1P8-201ENST00000558211 CCL24O00175 119 aa9.26□□□□□ -0.93
HMGB1P8-201ENST00000558211 CORTO00230 105 aa9.26□□□□□ -0.93
HMGB1P8-201ENST00000558211 TMEM50AO95807 157 aa9.26□□□□□ -0.93
HMGB1P8-201ENST00000558211 RLN2P04090 185 aa9.26□□□□□ -0.93
HMGB1P8-201ENST00000558211 PVALBP20472 110 aaPredicted RBP9.26□□□□□ -0.93
HMGB1P8-201ENST00000558211 PAX9P55771 341 aa9.26□□□□□ -0.93
HMGB1P8-201ENST00000558211 KLK9Q2XQG4 91 aa9.26□□□□□ -0.93
HMGB1P8-201ENST00000558211 Q56UQ5 140 aa9.26□□□□□ -0.93
HMGB1P8-201ENST00000558211 ZNF343Q6P1L6 599 aa9.26□□□□□ -0.93
HMGB1P8-201ENST00000558211 ACSM6Q6P461 480 aa9.26□□□□□ -0.93
HMGB1P8-201ENST00000558211 OR4F17Q8NGA8 305 aa9.26□□□□□ -0.93
HMGB1P8-201ENST00000558211 SMIM8Q96KF7 97 aa9.26□□□□□ -0.93
HMGB1P8-201ENST00000558211 OR4C12Q96R67 309 aa9.26□□□□□ -0.93
HMGB1P8-201ENST00000558211 OR4F4Q96R69 305 aa9.26□□□□□ -0.93
HMGB1P8-201ENST00000558211 RAB40CQ96S21 281 aa9.26□□□□□ -0.93
HMGB1P8-201ENST00000558211 C21orf62Q9NYP8 219 aa9.26□□□□□ -0.93
HMGB1P8-201ENST00000558211 PEF1Q9UBV8 284 aaKnown RBP9.26□□□□□ -0.93
HMGB1P8-201ENST00000558211 KLK9Q9UKQ9 250 aa9.26□□□□□ -0.93
HMGB1P8-201ENST00000558211 TRBV7-1A0A0A6YYK4 115 aa9.25□□□□□ -0.93
HMGB1P8-201ENST00000558211 OR2T8A6NH00 312 aa9.25□□□□□ -0.93
HMGB1P8-201ENST00000558211 HSPB1P04792 205 aaKnown RBP9.25□□□□□ -0.93
HMGB1P8-201ENST00000558211 CLEC3BP05452 202 aa9.25□□□□□ -0.93
HMGB1P8-201ENST00000558211 GPR183P32249 361 aa9.25□□□□□ -0.93
HMGB1P8-201ENST00000558211 CAV2P51636 162 aa9.25□□□□□ -0.93
HMGB1P8-201ENST00000558211 MFAP4P55083 255 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms