RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 GNG7O60262 68 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 SNAPC5O75971 98 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 RAB6AP20340 208 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 NPPCP23582 126 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 HTR2BP41595 481 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 ERVK-16P61578 105 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 MSMO1Q15800 293 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 ACTL10Q5JWF8 245 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 HES5Q5TA89 166 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 TOMM20LQ6UXN7 152 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 TMEM91Q6ZNR0 172 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 TPRA1Q86W33 373 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 C6orf223Q8N319 242 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 DHRSXQ8N5I4 330 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 BPIFB6Q8NFQ5 453 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 OR1P1Q8NH06 330 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 SECTM1Q8WVN6 248 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 UFD1Q92890 307 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 TMEM203Q969S6 136 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 MOB3AQ96BX8 217 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 GPHA2Q96T91 129 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 NEU1Q99519 415 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 ATG101Q9BSB4 218 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 SCRT1Q9BWW7 348 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 ATG5Q9H1Y0 275 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 PLEKHA2Q9HB19 425 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 CCL28Q9NRJ3 127 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 NDUFA4L2Q9NRX3 87 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 TMEM140Q9NV12 185 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 OR51B2Q9Y5P1 312 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 NACAE9PAV3 2078 aa3.69□□□□□ -1.82
SPG11-208ENST00000558155 IGHV3-66A0A0C4DH42 116 aa3.69□□□□□ -1.82
SPG11-208ENST00000558155 SSX5O60225 188 aa3.69□□□□□ -1.82
SPG11-208ENST00000558155 MT-CO2P00403 227 aa3.69□□□□□ -1.82
SPG11-208ENST00000558155 APOHP02749 345 aaPredicted RBP3.69□□□□□ -1.82
SPG11-208ENST00000558155 C4BPBP20851 252 aa3.69□□□□□ -1.82
SPG11-208ENST00000558155 PSMA1P25786 263 aaKnown RBP3.69□□□□□ -1.82
SPG11-208ENST00000558155 FGF9P31371 208 aaPredicted RBP3.69□□□□□ -1.82
SPG11-208ENST00000558155 FCGR2CP31995 323 aa3.69□□□□□ -1.82
SPG11-208ENST00000558155 NPBWR1P48145 328 aa3.69□□□□□ -1.82
SPG11-208ENST00000558155 EIF2B2P49770 351 aaKnown RBP3.69□□□□□ -1.82
SPG11-208ENST00000558155 EMP1P54849 157 aa3.69□□□□□ -1.82
SPG11-208ENST00000558155 OXA1LQ15070 435 aa3.69□□□□□ -1.82
SPG11-208ENST00000558155 ZNF674Q2M3X9 581 aa3.69□□□□□ -1.82
SPG11-208ENST00000558155 HACD4Q5VWC8 232 aa3.69□□□□□ -1.82
SPG11-208ENST00000558155 SPATA12Q7Z6I5 190 aa3.69□□□□□ -1.82
SPG11-208ENST00000558155 C8orf59Q8N0T1 100 aaPredicted RBP3.69□□□□□ -1.82
SPG11-208ENST00000558155 PQLC1Q8N2U9 271 aa3.69□□□□□ -1.82
SPG11-208ENST00000558155 FAM24BQ8N5W8 94 aa3.69□□□□□ -1.82
SPG11-208ENST00000558155 STXBP6Q8NFX7 210 aa3.69□□□□□ -1.82
SPG11-208ENST00000558155 MISP3Q96FF7 219 aa3.69□□□□□ -1.82
SPG11-208ENST00000558155 NARS2Q96I59 477 aaKnown RBP3.69□□□□□ -1.82
SPG11-208ENST00000558155 RAB40CQ96S21 281 aa3.69□□□□□ -1.82
SPG11-208ENST00000558155 NIPSNAP3BQ9BS92 247 aa3.69□□□□□ -1.82
SPG11-208ENST00000558155 SLC5A7Q9GZV3 580 aa3.69□□□□□ -1.82
SPG11-208ENST00000558155 S100A14Q9HCY8 104 aa3.69□□□□□ -1.82
SPG11-208ENST00000558155 RHBDL2Q9NX52 303 aa3.69□□□□□ -1.82
SPG11-208ENST00000558155 COMMD9Q9P000 198 aa3.69□□□□□ -1.82
SPG11-208ENST00000558155 XCL2Q9UBD3 114 aa3.69□□□□□ -1.82
SPG11-208ENST00000558155 ANXA10Q9UJ72 324 aa3.69□□□□□ -1.82
SPG11-208ENST00000558155 PRNDQ9UKY0 176 aa3.69□□□□□ -1.82
SPG11-208ENST00000558155 DNAH6Q9C0G6 4158 aa3.69□□□□□ -1.82
SPG11-208ENST00000558155 ABCA13Q86UQ4 5058 aa3.68□□□□□ -1.82
SPG11-208ENST00000558155 NBDYA0A0U1RRE5 68 aa3.68□□□□□ -1.82
SPG11-208ENST00000558155 A6NHS1 94 aa3.68□□□□□ -1.82
SPG11-208ENST00000558155 PTGES3LE9PB15 166 aa3.68□□□□□ -1.82
SPG11-208ENST00000558155 I3L2K1 104 aa3.68□□□□□ -1.82
SPG11-208ENST00000558155 KRASP01116 189 aa3.68□□□□□ -1.82
SPG11-208ENST00000558155 ZNF688P0C7X2 276 aa3.68□□□□□ -1.82
SPG11-208ENST00000558155 HSMCR30P0CW71 290 aa3.68□□□□□ -1.82
SPG11-208ENST00000558155 HTN3P15516 51 aa3.68□□□□□ -1.82
SPG11-208ENST00000558155 HOXA1P49639 335 aaPredicted RBP3.68□□□□□ -1.82
SPG11-208ENST00000558155 AP2S1P53680 142 aaPredicted RBP3.68□□□□□ -1.82
SPG11-208ENST00000558155 GNG2P59768 71 aa3.68□□□□□ -1.82
SPG11-208ENST00000558155 ERHP84090 104 aaKnown RBP3.68□□□□□ -1.82
SPG11-208ENST00000558155 KCTD21Q4G0X4 260 aa3.68□□□□□ -1.82
SPG11-208ENST00000558155 AADACL3Q5VUY0 350 aa3.68□□□□□ -1.82
SPG11-208ENST00000558155 GSG1LQ6UXU4 331 aa3.68□□□□□ -1.82
SPG11-208ENST00000558155 CLVS1Q8IUQ0 354 aaPredicted RBP3.68□□□□□ -1.82
SPG11-208ENST00000558155 C15orf53Q8NAA6 179 aa3.68□□□□□ -1.82
SPG11-208ENST00000558155 SLC24A4Q8NFF2 622 aa3.68□□□□□ -1.82
SPG11-208ENST00000558155 TSPAN14Q8NG11 270 aa3.68□□□□□ -1.82
SPG11-208ENST00000558155 BORCS5Q969J3 196 aa3.68□□□□□ -1.82
SPG11-208ENST00000558155 PINX1Q96BK5 328 aaKnown RBP3.68□□□□□ -1.82
SPG11-208ENST00000558155 ANAPC16Q96DE5 110 aa3.68□□□□□ -1.82
SPG11-208ENST00000558155 METTL26Q96S19 204 aa3.68□□□□□ -1.82
SPG11-208ENST00000558155 YTHDF1Q9BYJ9 559 aaKnown RBP3.68□□□□□ -1.82
SPG11-208ENST00000558155 WDR12Q9GZL7 423 aaKnown RBP3.68□□□□□ -1.82
SPG11-208ENST00000558155 ACOT13Q9NPJ3 140 aa3.68□□□□□ -1.82
SPG11-208ENST00000558155 DIABLOQ9NR28 239 aa3.68□□□□□ -1.82
SPG11-208ENST00000558155 NUDT15Q9NV35 164 aa3.68□□□□□ -1.82
SPG11-208ENST00000558155 DKK2Q9UBU2 259 aa3.68□□□□□ -1.82
SPG11-208ENST00000558155 ELF5Q9UKW6 265 aaPredicted RBP3.68□□□□□ -1.82
SPG11-208ENST00000558155 PUS1Q9Y606 427 aaKnown RBP eCLIP3.68□□□□□ -1.82
SPG11-208ENST00000558155 RFNGQ9Y644 331 aa3.68□□□□□ -1.82
SPG11-208ENST00000558155 TRAV1-2A0A0B4J238 106 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 HELTA6NFD8 242 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 IFITM5A6NNB3 132 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 MARCH11A6NNE9 402 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 SCGB2A1O75556 95 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms