RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 LSM10Q969L4 123 aaKnown RBP5.78□□□□□ -1.48
SPG11-205ENST00000558080 WWC2-AS2Q96NR7 200 aa5.78□□□□□ -1.48
SPG11-205ENST00000558080 AQP10Q96PS8 301 aa5.78□□□□□ -1.48
SPG11-205ENST00000558080 GPHA2Q96T91 129 aa5.78□□□□□ -1.48
SPG11-205ENST00000558080 HSD17B10Q99714 261 aaKnown RBP5.78□□□□□ -1.48
SPG11-205ENST00000558080 ARPC5LQ9BPX5 153 aa5.78□□□□□ -1.48
SPG11-205ENST00000558080 RNF126Q9BV68 326 aa5.78□□□□□ -1.48
SPG11-205ENST00000558080 ELOVL1Q9BW60 279 aa5.78□□□□□ -1.48
SPG11-205ENST00000558080 ZNF430Q9H8G1 570 aaPredicted RBP5.78□□□□□ -1.48
SPG11-205ENST00000558080 PLEKHA2Q9HB19 425 aa5.78□□□□□ -1.48
SPG11-205ENST00000558080 UBQLN2Q9UHD9 624 aa5.78□□□□□ -1.48
SPG11-205ENST00000558080 PRELID3BQ9Y3B1 194 aa5.78□□□□□ -1.48
SPG11-205ENST00000558080 SMAD5-AS1Q9Y6J3 95 aa5.78□□□□□ -1.48
SPG11-205ENST00000558080 U3KQK5 164 aa5.78□□□□□ -1.48
SPG11-205ENST00000558080 A0A1B0GU03 582 aa5.77□□□□□ -1.49
SPG11-205ENST00000558080 E5RGE8 158 aa5.77□□□□□ -1.49
SPG11-205ENST00000558080 H0YIZ8 118 aa5.77□□□□□ -1.49
SPG11-205ENST00000558080 K7EPK0 472 aa5.77□□□□□ -1.49
SPG11-205ENST00000558080 ST8SIA3O43173 380 aa5.77□□□□□ -1.49
SPG11-205ENST00000558080 RBMXL2O75526 392 aaKnown RBP5.77□□□□□ -1.49
SPG11-205ENST00000558080 ACTL6BO94805 426 aa5.77□□□□□ -1.49
SPG11-205ENST00000558080 TRBV12-3P01733 135 aa5.77□□□□□ -1.49
SPG11-205ENST00000558080 MBPP02686 304 aaPredicted RBP5.77□□□□□ -1.49
SPG11-205ENST00000558080 PRH1P02810 166 aa5.77□□□□□ -1.49
SPG11-205ENST00000558080 OR9G9P0C7N8 305 aa5.77□□□□□ -1.49
SPG11-205ENST00000558080 SAA1P0DJI8 122 aaPredicted RBP5.77□□□□□ -1.49
SPG11-205ENST00000558080 GP9P14770 177 aa5.77□□□□□ -1.49
SPG11-205ENST00000558080 PVALBP20472 110 aaPredicted RBP5.77□□□□□ -1.49
SPG11-205ENST00000558080 ZP3P21754 424 aa5.77□□□□□ -1.49
SPG11-205ENST00000558080 NKX2-1P43699 371 aaPredicted RBP5.77□□□□□ -1.49
SPG11-205ENST00000558080 RAB14P61106 215 aa5.77□□□□□ -1.49
SPG11-205ENST00000558080 EIF4EBP1Q13541 118 aaPredicted RBP5.77□□□□□ -1.49
SPG11-205ENST00000558080 NMSQ5H8A3 153 aa5.77□□□□□ -1.49
SPG11-205ENST00000558080 C10orf55Q5SWW7 151 aa5.77□□□□□ -1.49
SPG11-205ENST00000558080 VKORC1L1Q8N0U8 176 aa5.77□□□□□ -1.49
SPG11-205ENST00000558080 CD300LFQ8TDQ1 290 aa5.77□□□□□ -1.49
SPG11-205ENST00000558080 TCTEX1D2Q8WW35 142 aa5.77□□□□□ -1.49
SPG11-205ENST00000558080 SRSF12Q8WXF0 261 aaKnown RBP5.77□□□□□ -1.49
SPG11-205ENST00000558080 RRNAD1Q96FB5 475 aaKnown RBP5.77□□□□□ -1.49
SPG11-205ENST00000558080 TMEM68Q96MH6 324 aa5.77□□□□□ -1.49
SPG11-205ENST00000558080 ZC4H2Q9NQZ6 224 aa5.77□□□□□ -1.49
SPG11-205ENST00000558080 OR5AC2Q9NZP5 309 aa5.77□□□□□ -1.49
SPG11-205ENST00000558080 NSG2Q9Y328 171 aa5.77□□□□□ -1.49
SPG11-205ENST00000558080 LSM5Q9Y4Y9 91 aaKnown RBP5.77□□□□□ -1.49
SPG11-205ENST00000558080 TAAR5O14804 337 aa5.76□□□□□ -1.49
SPG11-205ENST00000558080 ATP6V1G1O75348 118 aa5.76□□□□□ -1.49
SPG11-205ENST00000558080 RPL12P30050 165 aaKnown RBP5.76□□□□□ -1.49
SPG11-205ENST00000558080 HTR2BP41595 481 aa5.76□□□□□ -1.49
SPG11-205ENST00000558080 KIR2DS2P43631 304 aa5.76□□□□□ -1.49
SPG11-205ENST00000558080 P2RY1P47900 373 aa5.76□□□□□ -1.49
SPG11-205ENST00000558080 AKR1C2P52895 323 aa5.76□□□□□ -1.49
SPG11-205ENST00000558080 SYNJ2BPP57105 145 aa5.76□□□□□ -1.49
SPG11-205ENST00000558080 VAMP2P63027 116 aa5.76□□□□□ -1.49
SPG11-205ENST00000558080 EIF5AP63241 154 aaKnown RBP5.76□□□□□ -1.49
SPG11-205ENST00000558080 RHOGP84095 191 aa5.76□□□□□ -1.49
SPG11-205ENST00000558080 EXOSC2Q13868 293 aaKnown RBP5.76□□□□□ -1.49
SPG11-205ENST00000558080 KLF5Q13887 457 aaPredicted RBP5.76□□□□□ -1.49
SPG11-205ENST00000558080 ZNF343Q6P1L6 599 aa5.76□□□□□ -1.49
SPG11-205ENST00000558080 SBSPONQ8IVN8 264 aa5.76□□□□□ -1.49
SPG11-205ENST00000558080 FAM219AQ8IW50 185 aa5.76□□□□□ -1.49
SPG11-205ENST00000558080 MMD2Q8IY49 270 aa5.76□□□□□ -1.49
SPG11-205ENST00000558080 SCARB1Q8WTV0 552 aa5.76□□□□□ -1.49
SPG11-205ENST00000558080 GPR146Q96CH1 333 aa5.76□□□□□ -1.49
SPG11-205ENST00000558080 PHYHIPLQ96FC7 376 aa5.76□□□□□ -1.49
SPG11-205ENST00000558080 ZNF471Q9BX82 626 aaPredicted RBP5.76□□□□□ -1.49
SPG11-205ENST00000558080 PEF1Q9UBV8 284 aaKnown RBP5.76□□□□□ -1.49
SPG11-205ENST00000558080 RCL1Q9Y2P8 373 aaKnown RBP5.76□□□□□ -1.49
SPG11-205ENST00000558080 TENM2Q9NT68 2774 aa5.75□□□□□ -1.49
SPG11-205ENST00000558080 WRBO00258 174 aa5.75□□□□□ -1.49
SPG11-205ENST00000558080 RBFOX2O43251 390 aaKnown RBP eCLIP5.75□□□□□ -1.49
SPG11-205ENST00000558080 PITX3O75364 302 aa5.75□□□□□ -1.49
SPG11-205ENST00000558080 BRI3O95415 125 aa5.75□□□□□ -1.49
SPG11-205ENST00000558080 CFDP00746 253 aaPredicted RBP5.75□□□□□ -1.49
SPG11-205ENST00000558080 IGKV1-39P01597 117 aa5.75□□□□□ -1.49
SPG11-205ENST00000558080 IGKV1D-39P04432 117 aa5.75□□□□□ -1.49
SPG11-205ENST00000558080 IL6RP08887 468 aaPredicted RBP5.75□□□□□ -1.49
SPG11-205ENST00000558080 FRMD6-AS1P0C7T7 363 aa5.75□□□□□ -1.49
SPG11-205ENST00000558080 TPT1P13693 172 aaKnown RBP5.75□□□□□ -1.49
SPG11-205ENST00000558080 LPAR6P43657 344 aa5.75□□□□□ -1.49
SPG11-205ENST00000558080 BRWD1-AS2P59051 145 aa5.75□□□□□ -1.49
SPG11-205ENST00000558080 ATP5G2Q06055 141 aa5.75□□□□□ -1.49
SPG11-205ENST00000558080 RPEL1Q2QD12 228 aa5.75□□□□□ -1.49
SPG11-205ENST00000558080 ZNF585BQ52M93 769 aa5.75□□□□□ -1.49
SPG11-205ENST00000558080 CLLU1Q5K131 121 aa5.75□□□□□ -1.49
SPG11-205ENST00000558080 C19orf35Q6ZS72 473 aa5.75□□□□□ -1.49
SPG11-205ENST00000558080 SSX9Q7RTT3 188 aa5.75□□□□□ -1.49
SPG11-205ENST00000558080 SPAG16Q8N0X2 631 aa5.75□□□□□ -1.49
SPG11-205ENST00000558080 OR9G4Q8NGQ1 327 aa5.75□□□□□ -1.49
SPG11-205ENST00000558080 OR4S2Q8NH73 311 aa5.75□□□□□ -1.49
SPG11-205ENST00000558080 STOML3Q8TAV4 291 aa5.75□□□□□ -1.49
SPG11-205ENST00000558080 ST8SIA2Q92186 375 aa5.75□□□□□ -1.49
SPG11-205ENST00000558080 USMG5Q96IX5 58 aa5.75□□□□□ -1.49
SPG11-205ENST00000558080 A0A0G2JRQ6 117 aa5.74□□□□□ -1.49
SPG11-205ENST00000558080 FAM90A26D6RGX4 464 aa5.74□□□□□ -1.49
SPG11-205ENST00000558080 E7EUB6 86 aa5.74□□□□□ -1.49
SPG11-205ENST00000558080 BMPR1BO00238 502 aa5.74□□□□□ -1.49
SPG11-205ENST00000558080 OR2J3O76001 311 aa5.74□□□□□ -1.49
SPG11-205ENST00000558080 KBTBD11O94819 623 aa5.74□□□□□ -1.49
SPG11-205ENST00000558080 S1PR2O95136 353 aa5.74□□□□□ -1.49
SPG11-205ENST00000558080 IGKV1-5P01602 117 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms