RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 VN1R17PQ8TDU5 208 aa13.18□□□□□ -0.3
SNX1-203ENST00000558040 ACY3Q96HD9 319 aa13.18□□□□□ -0.3
SNX1-203ENST00000558040 CXorf58Q96LI9 332 aa13.18□□□□□ -0.3
SNX1-203ENST00000558040 MS4A10Q96PG2 267 aa13.18□□□□□ -0.3
SNX1-203ENST00000558040 WDR61Q9GZS3 305 aaKnown RBP13.18□□□□□ -0.3
SNX1-203ENST00000558040 FN1P02751 2386 aaKnown RBP13.17□□□□□ -0.3
SNX1-203ENST00000558040 MPDU1O75352 247 aa13.17□□□□□ -0.3
SNX1-203ENST00000558040 NDUFB8O95169 186 aa13.17□□□□□ -0.3
SNX1-203ENST00000558040 FGF7P21781 194 aa13.17□□□□□ -0.3
SNX1-203ENST00000558040 RND2P52198 227 aa13.17□□□□□ -0.3
SNX1-203ENST00000558040 TPPP2P59282 170 aa13.17□□□□□ -0.3
SNX1-203ENST00000558040 RAB31Q13636 194 aa13.17□□□□□ -0.3
SNX1-203ENST00000558040 MLANAQ16655 118 aa13.17□□□□□ -0.3
SNX1-203ENST00000558040 C15orf32Q32M92 178 aa13.17□□□□□ -0.3
SNX1-203ENST00000558040 TEX38Q6PEX7 206 aa13.17□□□□□ -0.3
SNX1-203ENST00000558040 TEPPQ6URK8 271 aa13.17□□□□□ -0.3
SNX1-203ENST00000558040 TREML4Q6UXN2 200 aa13.17□□□□□ -0.3
SNX1-203ENST00000558040 TMEM144Q7Z5S9 345 aa13.17□□□□□ -0.3
SNX1-203ENST00000558040 BAP18Q8IXM2 172 aa13.17□□□□□ -0.3
SNX1-203ENST00000558040 COMMD1Q8N668 190 aa13.17□□□□□ -0.3
SNX1-203ENST00000558040 TMEM116Q8NCL8 245 aa13.17□□□□□ -0.3
SNX1-203ENST00000558040 SCARB1Q8WTV0 552 aa13.17□□□□□ -0.3
SNX1-203ENST00000558040 ST8SIA2Q92186 375 aa13.17□□□□□ -0.3
SNX1-203ENST00000558040 USMG5Q96IX5 58 aa13.17□□□□□ -0.3
SNX1-203ENST00000558040 WDR83OSQ9Y284 106 aa13.17□□□□□ -0.3
SNX1-203ENST00000558040 MXRA5Q9NR99 2828 aa13.16□□□□□ -0.3
SNX1-203ENST00000558040 IGHV3-21A0A0B4J1V1 117 aa13.16□□□□□ -0.3
SNX1-203ENST00000558040 A0A0G2JLM5 398 aa13.16□□□□□ -0.3
SNX1-203ENST00000558040 SCGB2A1O75556 95 aa13.16□□□□□ -0.3
SNX1-203ENST00000558040 ELANEP08246 267 aa13.16□□□□□ -0.3
SNX1-203ENST00000558040 NPBWR1P48145 328 aa13.16□□□□□ -0.3
SNX1-203ENST00000558040 MFAP4P55083 255 aa13.16□□□□□ -0.3
SNX1-203ENST00000558040 ATP5G2Q06055 141 aa13.16□□□□□ -0.3
SNX1-203ENST00000558040 FOXE3Q13461 319 aa13.16□□□□□ -0.3
SNX1-203ENST00000558040 EIF5AL1Q6IS14 154 aaKnown RBP13.16□□□□□ -0.3
SNX1-203ENST00000558040 BTNL8Q6UX41 500 aa13.16□□□□□ -0.3
SNX1-203ENST00000558040 ZNF329Q86UD4 541 aa13.16□□□□□ -0.3
SNX1-203ENST00000558040 HSD17B11Q8NBQ5 300 aa13.16□□□□□ -0.3
SNX1-203ENST00000558040 OR4F5Q8NH21 305 aa13.16□□□□□ -0.3
SNX1-203ENST00000558040 OR4X1Q8NH49 305 aa13.16□□□□□ -0.3
SNX1-203ENST00000558040 NPIPB3Q92617 1050 aa13.16□□□□□ -0.3
SNX1-203ENST00000558040 TAF15Q92804 592 aaKnown RBP eCLIP13.16□□□□□ -0.3
SNX1-203ENST00000558040 EEF1AKMT3Q96AZ1 226 aa13.16□□□□□ -0.3
SNX1-203ENST00000558040 GNPNAT1Q96EK6 184 aaPredicted RBP13.16□□□□□ -0.3
SNX1-203ENST00000558040 C21orf62Q9NYP8 219 aa13.16□□□□□ -0.3
SNX1-203ENST00000558040 MTORP42345 2549 aa13.16□□□□□ -0.3
SNX1-203ENST00000558040 C17orf112F2Z3M2 114 aa13.15□□□□□ -0.3
SNX1-203ENST00000558040 IGHV3-48P01763 117 aa13.15□□□□□ -0.3
SNX1-203ENST00000558040 PSMB8P28062 276 aa13.15□□□□□ -0.3
SNX1-203ENST00000558040 ZNF709Q8N972 641 aa13.15□□□□□ -0.3
SNX1-203ENST00000558040 TXN2Q99757 166 aa13.15□□□□□ -0.3
SNX1-203ENST00000558040 GINS3Q9BRX5 216 aa13.15□□□□□ -0.3
SNX1-203ENST00000558040 ARV1Q9H2C2 271 aa13.15□□□□□ -0.3
SNX1-203ENST00000558040 KCNIP2Q9NS61 270 aa13.15□□□□□ -0.3
SNX1-203ENST00000558040 GAR1Q9NY12 217 aaKnown RBP13.15□□□□□ -0.3
SNX1-203ENST00000558040 TRBV7-1A0A0A6YYK4 115 aa13.14□□□□□ -0.31
SNX1-203ENST00000558040 MFSD2BA6NFX1 497 aa13.14□□□□□ -0.31
SNX1-203ENST00000558040 MDKP21741 143 aaPredicted RBP13.14□□□□□ -0.31
SNX1-203ENST00000558040 RAB9AP51151 201 aa13.14□□□□□ -0.31
SNX1-203ENST00000558040 Q56UQ5 140 aa13.14□□□□□ -0.31
SNX1-203ENST00000558040 THAP8Q8NA92 274 aa13.14□□□□□ -0.31
SNX1-203ENST00000558040 LINC01006Q8NI28 216 aa13.14□□□□□ -0.31
SNX1-203ENST00000558040 PHYHIPLQ96FC7 376 aa13.14□□□□□ -0.31
SNX1-203ENST00000558040 LSM4Q9Y4Z0 139 aaKnown RBP13.14□□□□□ -0.31
SNX1-203ENST00000558040 NSD1Q96L73 2696 aaPredicted RBP13.14□□□□□ -0.31
SNX1-203ENST00000558040 TRAV30A0A087WSZ9 112 aa13.13□□□□□ -0.31
SNX1-203ENST00000558040 ZFP92A6NM28 416 aa13.13□□□□□ -0.31
SNX1-203ENST00000558040 GNG7O60262 68 aa13.13□□□□□ -0.31
SNX1-203ENST00000558040 CLN5O75503 358 aa13.13□□□□□ -0.31
SNX1-203ENST00000558040 ATP6V0CP27449 155 aa13.13□□□□□ -0.31
SNX1-203ENST00000558040 FCGR2BP31994 310 aaPredicted RBP13.13□□□□□ -0.31
SNX1-203ENST00000558040 DEFA5Q01523 94 aa13.13□□□□□ -0.31
SNX1-203ENST00000558040 FAM209BQ5JX69 171 aa13.13□□□□□ -0.31
SNX1-203ENST00000558040 KLHDC1Q8N7A1 406 aa13.13□□□□□ -0.31
SNX1-203ENST00000558040 OR4X2Q8NGF9 303 aa13.13□□□□□ -0.31
SNX1-203ENST00000558040 ZNF502Q8TBZ5 544 aa13.13□□□□□ -0.31
SNX1-203ENST00000558040 ATP6V0BQ99437 205 aa13.13□□□□□ -0.31
SNX1-203ENST00000558040 PSMG3Q9BT73 122 aaPredicted RBP13.13□□□□□ -0.31
SNX1-203ENST00000558040 NPCDR1Q9BY65 106 aa13.13□□□□□ -0.31
SNX1-203ENST00000558040 KLK15Q9H2R5 256 aa13.13□□□□□ -0.31
SNX1-203ENST00000558040 MRPL36Q9P0J6 103 aaKnown RBP13.13□□□□□ -0.31
SNX1-203ENST00000558040 TIMM9Q9Y5J7 89 aa13.13□□□□□ -0.31
SNX1-203ENST00000558040 FABP1P07148 127 aa13.12□□□□□ -0.31
SNX1-203ENST00000558040 SEC11BP0C7V7 166 aa13.12□□□□□ -0.31
SNX1-203ENST00000558040 OR10J1P30954 320 aa13.12□□□□□ -0.31
SNX1-203ENST00000558040 CAMLGP49069 296 aa13.12□□□□□ -0.31
SNX1-203ENST00000558040 RUNX1Q01196 453 aa13.12□□□□□ -0.31
SNX1-203ENST00000558040 RNF152Q8N8N0 203 aa13.12□□□□□ -0.31
SNX1-203ENST00000558040 OR5AU1Q8NGC0 362 aa13.12□□□□□ -0.31
SNX1-203ENST00000558040 TRGV9Q99603 122 aa13.12□□□□□ -0.31
SNX1-203ENST00000558040 MGST2Q99735 147 aa13.12□□□□□ -0.31
SNX1-203ENST00000558040 RSG1Q9BU20 258 aa13.12□□□□□ -0.31
SNX1-203ENST00000558040 S4R3C0 116 aa13.12□□□□□ -0.31
SNX1-203ENST00000558040 A0A1B0GUS0 222 aa13.11□□□□□ -0.31
SNX1-203ENST00000558040 CLPSL1A2RUU4 121 aa13.11□□□□□ -0.31
SNX1-203ENST00000558040 AGPAT2O15120 278 aa13.11□□□□□ -0.31
SNX1-203ENST00000558040 IFNA7P01567 189 aa13.11□□□□□ -0.31
SNX1-203ENST00000558040 SPP1P10451 314 aa13.11□□□□□ -0.31
SNX1-203ENST00000558040 TEX261Q6UWH6 196 aa13.11□□□□□ -0.31
SNX1-203ENST00000558040 C10orf99Q6UWK7 81 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 427.9 ms