RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 GABARAPL2P60520 117 aa2.99□□□□□ -1.93
MTHFD1-216ENST00000557539 CXCR4P61073 352 aa2.99□□□□□ -1.93
MTHFD1-216ENST00000557539 DAD1P61803 113 aa2.99□□□□□ -1.93
MTHFD1-216ENST00000557539 HPCAP84074 193 aa2.99□□□□□ -1.93
MTHFD1-216ENST00000557539 ZNF816Q0VGE8 651 aaPredicted RBP2.99□□□□□ -1.93
MTHFD1-216ENST00000557539 CLVS2Q5SYC1 327 aa2.99□□□□□ -1.93
MTHFD1-216ENST00000557539 C1orf195Q5TG92 126 aa2.99□□□□□ -1.93
MTHFD1-216ENST00000557539 FAM104BQ5XKR9 115 aa2.99□□□□□ -1.93
MTHFD1-216ENST00000557539 FAM71E1Q6IPT2 247 aa2.99□□□□□ -1.93
MTHFD1-216ENST00000557539 KRTAP5-4Q6L8H1 288 aa2.99□□□□□ -1.93
MTHFD1-216ENST00000557539 SLC51BQ86UW2 128 aa2.99□□□□□ -1.93
MTHFD1-216ENST00000557539 TRAPPC5Q8IUR0 188 aa2.99□□□□□ -1.93
MTHFD1-216ENST00000557539 ZFP82Q8N141 532 aa2.99□□□□□ -1.93
MTHFD1-216ENST00000557539 NATD1Q8N6N6 113 aa2.99□□□□□ -1.93
MTHFD1-216ENST00000557539 SPANXA2-OT1Q8N9U9 137 aa2.99□□□□□ -1.93
MTHFD1-216ENST00000557539 OR1P1Q8NH06 330 aa2.99□□□□□ -1.93
MTHFD1-216ENST00000557539 CLDND2Q8NHS1 167 aa2.99□□□□□ -1.93
MTHFD1-216ENST00000557539 EEF1AKMT1Q8WVE0 214 aa2.99□□□□□ -1.93
MTHFD1-216ENST00000557539 MAL2Q969L2 176 aa2.99□□□□□ -1.93
MTHFD1-216ENST00000557539 TMBIM1Q969X1 311 aa2.99□□□□□ -1.93
MTHFD1-216ENST00000557539 APOBEC3DQ96AK3 386 aaPredicted RBP2.99□□□□□ -1.93
MTHFD1-216ENST00000557539 TLCD1Q96CP7 247 aa2.99□□□□□ -1.93
MTHFD1-216ENST00000557539 BCL2L14Q9BZR8 327 aa2.99□□□□□ -1.93
MTHFD1-216ENST00000557539 C16orf95Q9H693 158 aa2.99□□□□□ -1.93
MTHFD1-216ENST00000557539 UBQLN4Q9NRR5 601 aa2.99□□□□□ -1.93
MTHFD1-216ENST00000557539 HDGFL3Q9Y3E1 203 aa2.99□□□□□ -1.93
MTHFD1-216ENST00000557539 SLC22A7Q9Y694 548 aa2.99□□□□□ -1.93
MTHFD1-216ENST00000557539 TEX50A0A1B0GTY4 177 aa2.98□□□□□ -1.93
MTHFD1-216ENST00000557539 C7orf66A4D0T2 115 aa2.98□□□□□ -1.93
MTHFD1-216ENST00000557539 E7EQL1 145 aa2.98□□□□□ -1.93
MTHFD1-216ENST00000557539 COPEO14579 308 aa2.98□□□□□ -1.93
MTHFD1-216ENST00000557539 RBBP9O75884 186 aa2.98□□□□□ -1.93
MTHFD1-216ENST00000557539 IFNA6P05013 189 aa2.98□□□□□ -1.93
MTHFD1-216ENST00000557539 IFNA16P05015 189 aa2.98□□□□□ -1.93
MTHFD1-216ENST00000557539 CTXN2P0C2S0 81 aa2.98□□□□□ -1.93
MTHFD1-216ENST00000557539 HIST1H1EP10412 219 aaKnown RBP2.98□□□□□ -1.93
MTHFD1-216ENST00000557539 ORM2P19652 201 aa2.98□□□□□ -1.93
MTHFD1-216ENST00000557539 PMELP40967 661 aa2.98□□□□□ -1.93
MTHFD1-216ENST00000557539 AESQ08117 197 aa2.98□□□□□ -1.93
MTHFD1-216ENST00000557539 RSU1Q15404 277 aa2.98□□□□□ -1.93
MTHFD1-216ENST00000557539 TAF1AQ15573 450 aaPredicted RBP2.98□□□□□ -1.93
MTHFD1-216ENST00000557539 TMEM176BQ3YBM2 270 aaPredicted RBP2.98□□□□□ -1.93
MTHFD1-216ENST00000557539 ABCA11PQ4W5N1 156 aa2.98□□□□□ -1.93
MTHFD1-216ENST00000557539 FAM131AQ6UXB0 335 aa2.98□□□□□ -1.93
MTHFD1-216ENST00000557539 C4orf22Q6V702 233 aa2.98□□□□□ -1.93
MTHFD1-216ENST00000557539 TMEM144Q7Z5S9 345 aa2.98□□□□□ -1.93
MTHFD1-216ENST00000557539 GID4Q8IVV7 300 aa2.98□□□□□ -1.93
MTHFD1-216ENST00000557539 UBL4BQ8N7F7 174 aa2.98□□□□□ -1.93
MTHFD1-216ENST00000557539 MFSD8Q8NHS3 518 aa2.98□□□□□ -1.93
MTHFD1-216ENST00000557539 TM2D3Q9BRN9 247 aa2.98□□□□□ -1.93
MTHFD1-216ENST00000557539 LINC00527Q9UJ94 153 aa2.98□□□□□ -1.93
MTHFD1-216ENST00000557539 DKKL1Q9UK85 242 aa2.98□□□□□ -1.93
MTHFD1-216ENST00000557539 KLK12Q9UKR0 248 aa2.98□□□□□ -1.93
MTHFD1-216ENST00000557539 RAB26Q9ULW5 256 aa2.98□□□□□ -1.93
MTHFD1-216ENST00000557539 POLR1DQ9Y2S0 133 aa2.98□□□□□ -1.93
MTHFD1-216ENST00000557539 HEY1Q9Y5J3 304 aa2.98□□□□□ -1.93
MTHFD1-216ENST00000557539 USH2AO75445 5202 aa2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 DPRXA6NFQ7 191 aa2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 EVPLLA8MZ36 301 aa2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 F5H5P2 479 aa2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 K7ERS5 55 aa2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 BET1O15155 118 aa2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 CDRT1O95170 752 aa2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 WISP3O95389 354 aaPredicted RBP2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 REG1AP05451 166 aa2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 FBP1P09467 338 aa2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 OR4A8P0C604 315 aa2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 GABRA4P48169 554 aa2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 PSMB3P49720 205 aa2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 LSM6P62312 80 aaKnown RBP2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 FUT5Q11128 374 aa2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 OR10K2Q6IF99 312 aa2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 EBLN2Q6P2I7 272 aa2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 UNQ9165/PRO28630Q6UXU0 137 aa2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 Q6ZRU5 148 aa2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 ATP5L2Q7Z4Y8 100 aa2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 DAZ4Q86SG3 579 aaKnown RBP2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 AMN1Q8IY45 258 aa2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 YIPF7Q8N8F6 280 aa2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 TMEM75Q8N9X5 138 aa2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 OR1M1Q8NGA1 313 aa2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 GPR32P1Q8NGA4 272 aa2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 OR4A5Q8NH83 315 aa2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 C16orf78Q8WTQ4 265 aa2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 RTN4IP1Q8WWV3 396 aaPredicted RBP2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 GALMQ96C23 342 aa2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 SHANK2-AS3Q9BTD1 123 aa2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 TSSK6Q9BXA6 273 aa2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 ZNF717Q9BY31 904 aaPredicted RBP2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 DAZ1Q9NQZ3 744 aaKnown RBP2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 SLC23A2Q9UGH3 650 aa2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 SLC22A13Q9Y226 551 aa2.97□□□□□ -1.93
MTHFD1-216ENST00000557539 SORL1Q92673 2214 aa2.96□□□□□ -1.94
MTHFD1-216ENST00000557539 TNXBP22105 4242 aa2.96□□□□□ -1.94
MTHFD1-216ENST00000557539 IGHV3-43A0A0B4J1X8 118 aa2.96□□□□□ -1.94
MTHFD1-216ENST00000557539 C2orf74A8MZ97 194 aa2.96□□□□□ -1.94
MTHFD1-216ENST00000557539 TCRBP04435 133 aa2.96□□□□□ -1.94
MTHFD1-216ENST00000557539 IL3P08700 152 aa2.96□□□□□ -1.94
MTHFD1-216ENST00000557539 OR13C7P0DN81 318 aa2.96□□□□□ -1.94
MTHFD1-216ENST00000557539 OR12D1P0DN82 309 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms