RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 TECRQ9NZ01 308 aaKnown RBP4.35□□□□□ -1.71
VPS33B-207ENST00000557470 RNF24Q9Y225 148 aa4.35□□□□□ -1.71
VPS33B-207ENST00000557470 RPL36Q9Y3U8 105 aaKnown RBP4.35□□□□□ -1.71
VPS33B-207ENST00000557470 ALG5Q9Y673 324 aa4.35□□□□□ -1.71
VPS33B-207ENST00000557470 TRBV9A0A0B4J1U6 114 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 FAM223BA6NKX1 122 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 SRRM4A7MD48 611 aaKnown RBP4.34□□□□□ -1.71
VPS33B-207ENST00000557470 E5RGE8 158 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 PPP5D1E7EU14 171 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 M0R1X1 148 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 RHODO00212 210 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 C1QBP02746 253 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 OR9G9P0C7N8 305 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 ZBTB25P24278 435 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 GPX4P36969 197 aaPredicted RBP4.34□□□□□ -1.71
VPS33B-207ENST00000557470 NKX2-1P43699 371 aaPredicted RBP4.34□□□□□ -1.71
VPS33B-207ENST00000557470 RPS27AP62979 156 aaKnown RBP4.34□□□□□ -1.71
VPS33B-207ENST00000557470 ATP5G2Q06055 141 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 GAGE1Q13065 139 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 DEFB135Q30KP9 77 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 LINC01620Q4KN68 170 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 GPR107Q5VW38 600 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 HACD4Q5VWC8 232 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 OR10K2Q6IF99 312 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 LAIR2Q6ISS4 152 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 TMPRSS11AQ6ZMR5 421 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 MOB1BQ7L9L4 216 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 PRSS48Q7RTY5 328 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 FAM223AQ8IWN6 122 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 ZFP41Q8N8Y5 198 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 OR1L4Q8NGR5 311 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 PHLDA1Q8WV24 401 aaPredicted RBP4.34□□□□□ -1.71
VPS33B-207ENST00000557470 APH1BQ8WW43 257 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 TMEM37Q8WXS4 190 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 PTX4Q96A99 478 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 ST6GAL2Q96JF0 529 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 HYLS1Q96M11 299 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 Q96MT0 163 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 DERL3Q96Q80 235 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 NICN1Q9BSH3 213 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 HDHD3Q9BSH5 251 aaPredicted RBP4.34□□□□□ -1.71
VPS33B-207ENST00000557470 TM2D2Q9BX73 214 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 FGF20Q9NP95 211 aaPredicted RBP4.34□□□□□ -1.71
VPS33B-207ENST00000557470 NIT2Q9NQR4 276 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 TP53TG1Q9Y2A0 90 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 KCNIP3Q9Y2W7 256 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 NSG2Q9Y328 171 aa4.34□□□□□ -1.71
VPS33B-207ENST00000557470 A0A0A6YYD4 124 aa4.33□□□□□ -1.72
VPS33B-207ENST00000557470 TRBV6-6A0A0A6YYG2 114 aa4.33□□□□□ -1.72
VPS33B-207ENST00000557470 IGKV1-6A0A0C4DH72 117 aa4.33□□□□□ -1.72
VPS33B-207ENST00000557470 TMEM213A2RRL7 107 aa4.33□□□□□ -1.72
VPS33B-207ENST00000557470 H3BTX0 84 aa4.33□□□□□ -1.72
VPS33B-207ENST00000557470 LGALS9O00182 355 aa4.33□□□□□ -1.72
VPS33B-207ENST00000557470 MPPED1O15442 326 aa4.33□□□□□ -1.72
VPS33B-207ENST00000557470 OR2J3O76001 311 aa4.33□□□□□ -1.72
VPS33B-207ENST00000557470 SCTP09683 121 aa4.33□□□□□ -1.72
VPS33B-207ENST00000557470 CD36P16671 472 aa4.33□□□□□ -1.72
VPS33B-207ENST00000557470 CBLN1P23435 193 aa4.33□□□□□ -1.72
VPS33B-207ENST00000557470 HLA-DMAP28067 261 aa4.33□□□□□ -1.72
VPS33B-207ENST00000557470 HTR2CP28335 458 aa4.33□□□□□ -1.72
VPS33B-207ENST00000557470 TNFSF8P32971 234 aa4.33□□□□□ -1.72
VPS33B-207ENST00000557470 HLA-DRB3P79483 266 aa4.33□□□□□ -1.72
VPS33B-207ENST00000557470 UNC119Q13432 240 aa4.33□□□□□ -1.72
VPS33B-207ENST00000557470 TNXAQ16473 311 aa4.33□□□□□ -1.72
VPS33B-207ENST00000557470 PRSS8Q16651 343 aa4.33□□□□□ -1.72
VPS33B-207ENST00000557470 C15orf32Q32M92 178 aa4.33□□□□□ -1.72
VPS33B-207ENST00000557470 ZNF57Q68EA5 555 aaPredicted RBP4.33□□□□□ -1.72
VPS33B-207ENST00000557470 ZNF367Q7RTV3 350 aa4.33□□□□□ -1.72
VPS33B-207ENST00000557470 TMEM17Q86X19 198 aa4.33□□□□□ -1.72
VPS33B-207ENST00000557470 C12orf45Q8N5I9 185 aaPredicted RBP4.33□□□□□ -1.72
VPS33B-207ENST00000557470 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.33□□□□□ -1.72
VPS33B-207ENST00000557470 NECAP1Q8NC96 275 aa4.33□□□□□ -1.72
VPS33B-207ENST00000557470 SFT2D1Q8WV19 159 aa4.33□□□□□ -1.72
VPS33B-207ENST00000557470 SRSF12Q8WXF0 261 aaKnown RBP4.33□□□□□ -1.72
VPS33B-207ENST00000557470 CCDC32Q9BV29 185 aa4.33□□□□□ -1.72
VPS33B-207ENST00000557470 TMEM59Q9BXS4 323 aa4.33□□□□□ -1.72
VPS33B-207ENST00000557470 KRTAP3-1Q9BYR8 98 aa4.33□□□□□ -1.72
VPS33B-207ENST00000557470 C5orf66Q9H5L9 145 aa4.33□□□□□ -1.72
VPS33B-207ENST00000557470 GHRLQ9UBU3 117 aa4.33□□□□□ -1.72
VPS33B-207ENST00000557470 CLEC2DQ9UHP7 191 aa4.33□□□□□ -1.72
VPS33B-207ENST00000557470 AK3Q9UIJ7 227 aa4.33□□□□□ -1.72
VPS33B-207ENST00000557470 ELF5Q9UKW6 265 aaPredicted RBP4.33□□□□□ -1.72
VPS33B-207ENST00000557470 LOC100130705A0A1B0GUX0 176 aa4.32□□□□□ -1.72
VPS33B-207ENST00000557470 A0A1B0GV90 55 aa4.32□□□□□ -1.72
VPS33B-207ENST00000557470 A8MWP6 167 aa4.32□□□□□ -1.72
VPS33B-207ENST00000557470 TEX46H3BTG2 121 aa4.32□□□□□ -1.72
VPS33B-207ENST00000557470 GGCTO75223 188 aaKnown RBP4.32□□□□□ -1.72
VPS33B-207ENST00000557470 SCO1O75880 301 aa4.32□□□□□ -1.72
VPS33B-207ENST00000557470 IGHV3-23P01764 117 aa4.32□□□□□ -1.72
VPS33B-207ENST00000557470 UBBP0CG47 229 aa4.32□□□□□ -1.72
VPS33B-207ENST00000557470 MYL12AP19105 171 aa4.32□□□□□ -1.72
VPS33B-207ENST00000557470 G0S2P27469 103 aa4.32□□□□□ -1.72
VPS33B-207ENST00000557470 APOC4P55056 127 aa4.32□□□□□ -1.72
VPS33B-207ENST00000557470 UBE2KP61086 200 aa4.32□□□□□ -1.72
VPS33B-207ENST00000557470 C10orf55Q5SWW7 151 aa4.32□□□□□ -1.72
VPS33B-207ENST00000557470 OR4A47Q6IF82 309 aa4.32□□□□□ -1.72
VPS33B-207ENST00000557470 Q6ZRM9 215 aa4.32□□□□□ -1.72
VPS33B-207ENST00000557470 C19orf35Q6ZS72 473 aa4.32□□□□□ -1.72
VPS33B-207ENST00000557470 GPHB5Q86YW7 130 aa4.32□□□□□ -1.72
VPS33B-207ENST00000557470 MMD2Q8IY49 270 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms