RNA–Protein interactions for RNA: ENST00000557424.1

HMGB1P14-201, Transcript of high mobility group box 1 pseudogene 14, humanhuman

BASIC

Gene HMGB1P14, Length 591 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P14-201ENST00000557424 NID2Q14112 1375 aa1.82□□□□□ -2.12
HMGB1P14-201ENST00000557424 ZNF646O15015 1829 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P14-201ENST00000557424 BRWD3Q6RI45 1802 aa1.82□□□□□ -2.12
HMGB1P14-201ENST00000557424 SOGA1O94964 1423 aa1.82□□□□□ -2.12
HMGB1P14-201ENST00000557424 FMN1Q68DA7 1419 aa1.82□□□□□ -2.12
HMGB1P14-201ENST00000557424 OTOFQ9HC10 1997 aa1.81□□□□□ -2.12
HMGB1P14-201ENST00000557424 PRRC2AP48634 2157 aaKnown RBP1.81□□□□□ -2.12
HMGB1P14-201ENST00000557424 CEP152O94986 1710 aa1.81□□□□□ -2.12
HMGB1P14-201ENST00000557424 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.81□□□□□ -2.12
HMGB1P14-201ENST00000557424 ZNF407Q9C0G0 2248 aa1.81□□□□□ -2.12
HMGB1P14-201ENST00000557424 A0A1B0GW54 56 aa1.81□□□□□ -2.12
HMGB1P14-201ENST00000557424 C11orf86A6NJI1 115 aa1.81□□□□□ -2.12
HMGB1P14-201ENST00000557424 LINC00587B1AMM8 73 aa1.81□□□□□ -2.12
HMGB1P14-201ENST00000557424 PFDN1O60925 122 aa1.81□□□□□ -2.12
HMGB1P14-201ENST00000557424 SHBGP04278 402 aa1.81□□□□□ -2.12
HMGB1P14-201ENST00000557424 ZNF728P0DKX0 622 aa1.81□□□□□ -2.12
HMGB1P14-201ENST00000557424 CSRP1P21291 193 aaKnown RBP1.81□□□□□ -2.12
HMGB1P14-201ENST00000557424 EIF2B2P49770 351 aaKnown RBP1.81□□□□□ -2.12
HMGB1P14-201ENST00000557424 EBI3Q14213 229 aa1.81□□□□□ -2.12
HMGB1P14-201ENST00000557424 MIAQ16674 131 aa1.81□□□□□ -2.12
HMGB1P14-201ENST00000557424 RTL8BQ17RB0 113 aa1.81□□□□□ -2.12
HMGB1P14-201ENST00000557424 TMEM229BQ8NBD8 167 aa1.81□□□□□ -2.12
HMGB1P14-201ENST00000557424 Q8NDZ9 215 aa1.81□□□□□ -2.12
HMGB1P14-201ENST00000557424 OR4C16Q8NGL9 310 aa1.81□□□□□ -2.12
HMGB1P14-201ENST00000557424 TEX37Q96LM6 180 aa1.81□□□□□ -2.12
HMGB1P14-201ENST00000557424 SLC25A21Q9BQT8 299 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P14-201ENST00000557424 MIEN1Q9BRT3 115 aa1.81□□□□□ -2.12
HMGB1P14-201ENST00000557424 RTL8AQ9BWD3 113 aa1.81□□□□□ -2.12
HMGB1P14-201ENST00000557424 MND1Q9BWT6 205 aa1.81□□□□□ -2.12
HMGB1P14-201ENST00000557424 MRPL32Q9BYC8 188 aaKnown RBP1.81□□□□□ -2.12
HMGB1P14-201ENST00000557424 OR2H1Q9GZK4 316 aa1.81□□□□□ -2.12
HMGB1P14-201ENST00000557424 CKLFQ9UBR5 152 aa1.81□□□□□ -2.12
HMGB1P14-201ENST00000557424 NUBP2Q9Y5Y2 271 aa1.81□□□□□ -2.12
HMGB1P14-201ENST00000557424 BCL9O00512 1426 aa1.81□□□□□ -2.12
HMGB1P14-201ENST00000557424 DOCK6Q96HP0 2047 aa1.81□□□□□ -2.12
HMGB1P14-201ENST00000557424 TRPM3Q9HCF6 1732 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 TRIP11Q15643 1979 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 A0A1B0GVG6 124 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 A0A1B0GX51 115 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 TMEM189A5PLL7 270 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 TLCD2A6NGC4 264 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 C9JAW5 83 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 UBFD1O14562 309 aaKnown RBP1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 OVOL1O14753 267 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 TNFSF15O95150 251 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 NPYP01303 97 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 C1QAP02745 245 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 C1QCP02747 245 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 MT-ND4LP03901 98 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 GZMBP10144 247 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 BCL2P10415 239 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 S100A4P26447 101 aaKnown RBP1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 CMPK1P30085 196 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 SRP9P49458 86 aaKnown RBP1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 GTF2A1P52655 376 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 TMBIM6P55061 237 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 ARPP19P56211 112 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 RPS28P62857 69 aaKnown RBP1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 HIST1H1AQ02539 215 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 ZNF141Q15928 474 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 SPANXN3Q5MJ09 141 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 C1orf140Q5VVS0 124 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 AGTRAPQ6RW13 159 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 LYZL1Q6UWQ5 148 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 MIR17HGQ75NE6 70 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 PRR15Q8IV56 129 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 TEX29Q8N6K0 151 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 C3orf56Q8N813 242 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 SCRT1Q9BWW7 348 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 TAF9BQ9HBM6 251 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 OSTCQ9NRP0 149 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 NAT8BQ9UHF3 227 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 HIGD1AQ9Y241 93 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 KIF24Q5T7B8 1368 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 PEG3Q9GZU2 1588 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 BICRAQ9NZM4 1560 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 KIF1BO60333 1816 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 TUBGCP6Q96RT7 1819 aa1.8□□□□□ -2.12
HMGB1P14-201ENST00000557424 CROCCQ5TZA2 2017 aa1.79□□□□□ -2.12
HMGB1P14-201ENST00000557424 A0A087X0T9 212 aa1.79□□□□□ -2.12
HMGB1P14-201ENST00000557424 LOC107984640A0A0U1RRK4 108 aa1.79□□□□□ -2.12
HMGB1P14-201ENST00000557424 GRIFINA4D1Z8 144 aa1.79□□□□□ -2.12
HMGB1P14-201ENST00000557424 RFPL4AA6NLU0 287 aa1.79□□□□□ -2.12
HMGB1P14-201ENST00000557424 TMEM212A6NML5 194 aa1.79□□□□□ -2.12
HMGB1P14-201ENST00000557424 RFPL4AL1F8VTS6 287 aa1.79□□□□□ -2.12
HMGB1P14-201ENST00000557424 J3QQQ9 107 aa1.79□□□□□ -2.12
HMGB1P14-201ENST00000557424 CPSF4O95639 269 aaKnown RBP1.79□□□□□ -2.12
HMGB1P14-201ENST00000557424 NAPSAO96009 420 aa1.79□□□□□ -2.12
HMGB1P14-201ENST00000557424 HTR1AP08908 422 aa1.79□□□□□ -2.12
HMGB1P14-201ENST00000557424 CRYGAP11844 174 aa1.79□□□□□ -2.12
HMGB1P14-201ENST00000557424 COX4I1P13073 169 aa1.79□□□□□ -2.12
HMGB1P14-201ENST00000557424 COL8A2P25067 703 aa1.79□□□□□ -2.12
HMGB1P14-201ENST00000557424 EIF5AP63241 154 aaKnown RBP1.79□□□□□ -2.12
HMGB1P14-201ENST00000557424 SOSTDC1Q6X4U4 206 aa1.79□□□□□ -2.12
HMGB1P14-201ENST00000557424 HIST3H2BBQ8N257 126 aa1.79□□□□□ -2.12
HMGB1P14-201ENST00000557424 SIGLECL1Q8N7X8 197 aa1.79□□□□□ -2.12
HMGB1P14-201ENST00000557424 OR2T10Q8NGZ9 312 aa1.79□□□□□ -2.12
HMGB1P14-201ENST00000557424 PFN4Q8NHR9 129 aa1.79□□□□□ -2.12
HMGB1P14-201ENST00000557424 VPS25Q9BRG1 176 aa1.79□□□□□ -2.12
HMGB1P14-201ENST00000557424 YIPF3Q9GZM5 350 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms