RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 TPRA1Q86W33 373 aa8.82□□□□□ -1
PSEN1-221ENST00000557293 OR5AP2Q8NGF4 316 aa8.82□□□□□ -1
PSEN1-221ENST00000557293 GLMPQ8WWB7 406 aa8.82□□□□□ -1
PSEN1-221ENST00000557293 CCDC90BQ9GZT6 254 aa8.82□□□□□ -1
PSEN1-221ENST00000557293 FNDC4Q9H6D8 234 aaPredicted RBP8.82□□□□□ -1
PSEN1-221ENST00000557293 TPRKBQ9Y3C4 175 aa8.82□□□□□ -1
PSEN1-221ENST00000557293 HELTA6NFD8 242 aa8.81□□□□□ -1
PSEN1-221ENST00000557293 NOTOA8MTQ0 251 aa8.81□□□□□ -1
PSEN1-221ENST00000557293 EPM2AB3EWF7 344 aa8.81□□□□□ -1
PSEN1-221ENST00000557293 SCGNO76038 276 aa8.81□□□□□ -1
PSEN1-221ENST00000557293 IGKV1-17P01599 117 aa8.81□□□□□ -1
PSEN1-221ENST00000557293 MYL9P24844 172 aa8.81□□□□□ -1
PSEN1-221ENST00000557293 DEFB1P60022 68 aa8.81□□□□□ -1
PSEN1-221ENST00000557293 NUTF2P61970 127 aaKnown RBP8.81□□□□□ -1
PSEN1-221ENST00000557293 C22orf42Q6IC83 251 aa8.81□□□□□ -1
PSEN1-221ENST00000557293 PRSS48Q7RTY5 328 aa8.81□□□□□ -1
PSEN1-221ENST00000557293 OR5H6Q8NGV6 325 aa8.81□□□□□ -1
PSEN1-221ENST00000557293 LGALS14Q8TCE9 139 aa8.81□□□□□ -1
PSEN1-221ENST00000557293 SLC25A38Q96DW6 304 aa8.81□□□□□ -1
PSEN1-221ENST00000557293 METTL26Q96S19 204 aa8.81□□□□□ -1
PSEN1-221ENST00000557293 TSC22D3Q99576 134 aa8.81□□□□□ -1
PSEN1-221ENST00000557293 RHBDL2Q9NX52 303 aa8.81□□□□□ -1
PSEN1-221ENST00000557293 RFNGQ9Y644 331 aa8.81□□□□□ -1
PSEN1-221ENST00000557293 FAM90A26D6RGX4 464 aa8.8□□□□□ -1
PSEN1-221ENST00000557293 CLN5O75503 358 aa8.8□□□□□ -1
PSEN1-221ENST00000557293 FXYD7P58549 80 aa8.8□□□□□ -1
PSEN1-221ENST00000557293 KCTD21Q4G0X4 260 aa8.8□□□□□ -1
PSEN1-221ENST00000557293 GDF5OSQ5U4N7 250 aa8.8□□□□□ -1
PSEN1-221ENST00000557293 C1orf158Q8N1D5 194 aa8.8□□□□□ -1
PSEN1-221ENST00000557293 AUNIPQ9H7T9 357 aa8.8□□□□□ -1
PSEN1-221ENST00000557293 NDUFB11Q9NX14 153 aa8.8□□□□□ -1
PSEN1-221ENST00000557293 FAT1Q14517 4588 aa8.8□□□□□ -1
PSEN1-221ENST00000557293 IGHV3OR16-12A0A075B7B8 117 aa8.79□□□□□ -1
PSEN1-221ENST00000557293 RNASE2P10153 161 aaKnown RBP8.79□□□□□ -1
PSEN1-221ENST00000557293 HLA-DRB4P13762 266 aa8.79□□□□□ -1
PSEN1-221ENST00000557293 RFX2P48378 723 aa8.79□□□□□ -1
PSEN1-221ENST00000557293 ERHP84090 104 aaKnown RBP8.79□□□□□ -1
PSEN1-221ENST00000557293 IZUMO4Q1ZYL8 232 aa8.79□□□□□ -1
PSEN1-221ENST00000557293 SPINK9Q5DT21 86 aa8.79□□□□□ -1
PSEN1-221ENST00000557293 C15orf53Q8NAA6 179 aa8.79□□□□□ -1
PSEN1-221ENST00000557293 SEPSECSQ9HD40 501 aaKnown RBP8.79□□□□□ -1
PSEN1-221ENST00000557293 DAPK2Q9UIK4 370 aa8.79□□□□□ -1
PSEN1-221ENST00000557293 TMED3Q9Y3Q3 217 aa8.79□□□□□ -1
PSEN1-221ENST00000557293 HLA-DRB4X5D2U9 266 aa8.79□□□□□ -1
PSEN1-221ENST00000557293 TEX48A0A1B0GUV7 120 aa8.78□□□□□ -1
PSEN1-221ENST00000557293 INS-IGF2F8WCM5 200 aa8.78□□□□□ -1
PSEN1-221ENST00000557293 XGP55808 180 aa8.78□□□□□ -1
PSEN1-221ENST00000557293 HERV-K104P61576 105 aa8.78□□□□□ -1
PSEN1-221ENST00000557293 TIGITQ495A1 244 aa8.78□□□□□ -1
PSEN1-221ENST00000557293 ZNF709Q8N972 641 aa8.78□□□□□ -1
PSEN1-221ENST00000557293 OR4X1Q8NH49 305 aa8.78□□□□□ -1
PSEN1-221ENST00000557293 OR4A16Q8NH70 328 aa8.78□□□□□ -1
PSEN1-221ENST00000557293 BORCS5Q969J3 196 aa8.78□□□□□ -1
PSEN1-221ENST00000557293 TMEM230Q96A57 120 aa8.78□□□□□ -1
PSEN1-221ENST00000557293 ZNF2Q9BSG1 426 aaPredicted RBP8.78□□□□□ -1
PSEN1-221ENST00000557293 KRTAP1-5Q9BYS1 174 aa8.78□□□□□ -1
PSEN1-221ENST00000557293 FXYD6Q9H0Q3 95 aa8.78□□□□□ -1
PSEN1-221ENST00000557293 FAM212BQ9NTI7 297 aaPredicted RBP8.78□□□□□ -1
PSEN1-221ENST00000557293 YTHDF2Q9Y5A9 579 aaKnown RBP8.78□□□□□ -1
PSEN1-221ENST00000557293 MEIS3P1A6NDR6 274 aa8.77□□□□□ -1.01
PSEN1-221ENST00000557293 GPR31O00270 319 aa8.77□□□□□ -1.01
PSEN1-221ENST00000557293 IGKV3-20P01619 116 aa8.77□□□□□ -1.01
PSEN1-221ENST00000557293 H2BFWTQ7Z2G1 175 aa8.77□□□□□ -1.01
PSEN1-221ENST00000557293 LYPD1Q8N2G4 141 aa8.77□□□□□ -1.01
PSEN1-221ENST00000557293 TSPAN14Q8NG11 270 aa8.77□□□□□ -1.01
PSEN1-221ENST00000557293 CLUHP3Q96NS8 147 aa8.77□□□□□ -1.01
PSEN1-221ENST00000557293 TXNL4BQ9NX01 149 aaKnown RBP8.77□□□□□ -1.01
PSEN1-221ENST00000557293 EHFQ9NZC4 300 aa8.77□□□□□ -1.01
PSEN1-221ENST00000557293 ANAPC10Q9UM13 185 aa8.77□□□□□ -1.01
PSEN1-221ENST00000557293 RRP15Q9Y3B9 282 aaKnown RBP8.77□□□□□ -1.01
PSEN1-221ENST00000557293 LINC00588Q9Y4M8 146 aa8.77□□□□□ -1.01
PSEN1-221ENST00000557293 A0A0B4J293 547 aa8.76□□□□□ -1.01
PSEN1-221ENST00000557293 HNRNPCP07910 306 aaKnown RBP eCLIP8.76□□□□□ -1.01
PSEN1-221ENST00000557293 CLEC2LP0C7M8 214 aa8.76□□□□□ -1.01
PSEN1-221ENST00000557293 NKX2-1P43699 371 aaPredicted RBP8.76□□□□□ -1.01
PSEN1-221ENST00000557293 RPL5P46777 297 aaKnown RBP8.76□□□□□ -1.01
PSEN1-221ENST00000557293 AP2S1P53680 142 aaPredicted RBP8.76□□□□□ -1.01
PSEN1-221ENST00000557293 DAD1P61803 113 aa8.76□□□□□ -1.01
PSEN1-221ENST00000557293 TBCEQ15813 527 aaPredicted RBP8.76□□□□□ -1.01
PSEN1-221ENST00000557293 SFXN4Q6P4A7 337 aa8.76□□□□□ -1.01
PSEN1-221ENST00000557293 ATG101Q9BSB4 218 aa8.76□□□□□ -1.01
PSEN1-221ENST00000557293 SLC35B3Q9H1N7 401 aa8.76□□□□□ -1.01
PSEN1-221ENST00000557293 FLG2Q5D862 2391 aaPredicted RBP8.76□□□□□ -1.01
PSEN1-221ENST00000557293 LOC102723971A0A1B0GUV8 181 aa8.75□□□□□ -1.01
PSEN1-221ENST00000557293 BUB3O43684 328 aa8.75□□□□□ -1.01
PSEN1-221ENST00000557293 PMP2P02689 132 aa8.75□□□□□ -1.01
PSEN1-221ENST00000557293 PRM2P04554 102 aa8.75□□□□□ -1.01
PSEN1-221ENST00000557293 P0C879 139 aa8.75□□□□□ -1.01
PSEN1-221ENST00000557293 NAT1P18440 290 aa8.75□□□□□ -1.01
PSEN1-221ENST00000557293 BTF3P20290 206 aaKnown RBP8.75□□□□□ -1.01
PSEN1-221ENST00000557293 SNCAP37840 140 aa8.75□□□□□ -1.01
PSEN1-221ENST00000557293 CBX5P45973 191 aa8.75□□□□□ -1.01
PSEN1-221ENST00000557293 EIF2B2P49770 351 aaKnown RBP8.75□□□□□ -1.01
PSEN1-221ENST00000557293 SNRPD3P62318 126 aaKnown RBP8.75□□□□□ -1.01
PSEN1-221ENST00000557293 USF2Q15853 346 aaPredicted RBP8.75□□□□□ -1.01
PSEN1-221ENST00000557293 PHLDA2Q53GA4 152 aa8.75□□□□□ -1.01
PSEN1-221ENST00000557293 LYSMD2Q8IV50 215 aa8.75□□□□□ -1.01
PSEN1-221ENST00000557293 CMTM1Q8IZ96 169 aa8.75□□□□□ -1.01
PSEN1-221ENST00000557293 MRGPRFQ96AM1 343 aa8.75□□□□□ -1.01
PSEN1-221ENST00000557293 NARS2Q96I59 477 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms