RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 HIPK2Q9H2X6 1198 aa17.27■□□□□ 0.36
TDP1-216ENST00000556867 FNDC4Q9H6D8 234 aaPredicted RBP17.27■□□□□ 0.36
TDP1-216ENST00000556867 DAZ1Q9NQZ3 744 aaKnown RBP17.27■□□□□ 0.36
TDP1-216ENST00000556867 MRPL27Q9P0M9 148 aaKnown RBP17.27■□□□□ 0.36
TDP1-216ENST00000556867 PITX3O75364 302 aa17.26■□□□□ 0.35
TDP1-216ENST00000556867 OPRK1P41145 380 aa17.26■□□□□ 0.35
TDP1-216ENST00000556867 OR1S1Q8NH92 325 aa17.26■□□□□ 0.35
TDP1-216ENST00000556867 BATF3Q9NR55 127 aa17.26■□□□□ 0.35
TDP1-216ENST00000556867 MLXQ9UH92 298 aa17.26■□□□□ 0.35
TDP1-216ENST00000556867 C11orf87Q6NUJ2 197 aa17.25■□□□□ 0.35
TDP1-216ENST00000556867 RNASEH2CQ8TDP1 164 aaKnown RBP17.25■□□□□ 0.35
TDP1-216ENST00000556867 RBKSQ9H477 322 aa17.25■□□□□ 0.35
TDP1-216ENST00000556867 RPS10-NUDT3A0A1W2PQS6 291 aa17.24■□□□□ 0.35
TDP1-216ENST00000556867 ZNF785A8K8V0 405 aa17.24■□□□□ 0.35
TDP1-216ENST00000556867 K7EMT4 169 aa17.24■□□□□ 0.35
TDP1-216ENST00000556867 OR4E1P0C645 316 aa17.24■□□□□ 0.35
TDP1-216ENST00000556867 ANXA7P20073 488 aaKnown RBP17.24■□□□□ 0.35
TDP1-216ENST00000556867 NPY1RP25929 384 aa17.24■□□□□ 0.35
TDP1-216ENST00000556867 DHRS2Q13268 280 aa17.24■□□□□ 0.35
TDP1-216ENST00000556867 BTNL8Q6UX41 500 aa17.24■□□□□ 0.35
TDP1-216ENST00000556867 LYG2Q86SG7 212 aa17.24■□□□□ 0.35
TDP1-216ENST00000556867 GTSCR1Q86UQ5 136 aa17.24■□□□□ 0.35
TDP1-216ENST00000556867 NOXA1Q86UR1 476 aa17.24■□□□□ 0.35
TDP1-216ENST00000556867 DTD1Q8TEA8 209 aa17.24■□□□□ 0.35
TDP1-216ENST00000556867 TMEM170AQ8WVE7 144 aa17.24■□□□□ 0.35
TDP1-216ENST00000556867 C20orf24Q9BUV8 137 aa17.24■□□□□ 0.35
TDP1-216ENST00000556867 C15orf62A8K5M9 175 aa17.23■□□□□ 0.35
TDP1-216ENST00000556867 FAM90A26D6RGX4 464 aa17.23■□□□□ 0.35
TDP1-216ENST00000556867 TMEM61Q8N0U2 210 aa17.23■□□□□ 0.35
TDP1-216ENST00000556867 OR4X1Q8NH49 305 aa17.23■□□□□ 0.35
TDP1-216ENST00000556867 C20orf85Q9H1P6 137 aa17.23■□□□□ 0.35
TDP1-216ENST00000556867 MRPL36Q9P0J6 103 aaKnown RBP17.23■□□□□ 0.35
TDP1-216ENST00000556867 U3KQ87 197 aa17.23■□□□□ 0.35
TDP1-216ENST00000556867 TMEM50AO95807 157 aa17.22■□□□□ 0.35
TDP1-216ENST00000556867 HOXB5P09067 269 aa17.22■□□□□ 0.35
TDP1-216ENST00000556867 MLANAQ16655 118 aa17.22■□□□□ 0.35
TDP1-216ENST00000556867 C4orf46Q504U0 113 aa17.22■□□□□ 0.35
TDP1-216ENST00000556867 GGNBP1Q5YKI7 109 aa17.22■□□□□ 0.35
TDP1-216ENST00000556867 COQ8AQ8NI60 647 aa17.22■□□□□ 0.35
TDP1-216ENST00000556867 WDR89Q96FK6 387 aaPredicted RBP17.22■□□□□ 0.35
TDP1-216ENST00000556867 OR10C1Q96KK4 312 aa17.22■□□□□ 0.35
TDP1-216ENST00000556867 WDR12Q9GZL7 423 aaKnown RBP17.22■□□□□ 0.35
TDP1-216ENST00000556867 IGHV3OR16-8A0A075B7F1 116 aa17.21■□□□□ 0.35
TDP1-216ENST00000556867 TRAV25A0A0B4J276 109 aa17.21■□□□□ 0.35
TDP1-216ENST00000556867 A8MZ25 164 aa17.21■□□□□ 0.35
TDP1-216ENST00000556867 CLN5O75503 358 aa17.21■□□□□ 0.35
TDP1-216ENST00000556867 IGHV4-30-4P0DP06 118 aa17.21■□□□□ 0.35
TDP1-216ENST00000556867 SELENOKQ9Y6D0 94 aa17.21■□□□□ 0.35
TDP1-216ENST00000556867 IFNA10P01566 189 aa17.2■□□□□ 0.34
TDP1-216ENST00000556867 TCRBP04435 133 aa17.2■□□□□ 0.34
TDP1-216ENST00000556867 FRMD6-AS1P0C7T7 363 aa17.2■□□□□ 0.34
TDP1-216ENST00000556867 NHLRC4P0CG21 123 aaPredicted RBP17.2■□□□□ 0.34
TDP1-216ENST00000556867 SLC25A4P12235 298 aa17.2■□□□□ 0.34
TDP1-216ENST00000556867 ATP5IP56385 69 aaPredicted RBP17.2■□□□□ 0.34
TDP1-216ENST00000556867 GUCA2BQ16661 112 aa17.2■□□□□ 0.34
TDP1-216ENST00000556867 ZNF600Q6ZNG1 722 aa17.2■□□□□ 0.34
TDP1-216ENST00000556867 ZNF207O43670 478 aaKnown RBP17.19■□□□□ 0.34
TDP1-216ENST00000556867 SCGB2A1O75556 95 aa17.19■□□□□ 0.34
TDP1-216ENST00000556867 ADAP1O75689 374 aa17.19■□□□□ 0.34
TDP1-216ENST00000556867 YIF1AO95070 293 aa17.19■□□□□ 0.34
TDP1-216ENST00000556867 ZNF846Q147U1 533 aa17.19■□□□□ 0.34
TDP1-216ENST00000556867 C19orf73Q9NVV2 129 aa17.19■□□□□ 0.34
TDP1-216ENST00000556867 TBC1D24Q9ULP9 559 aa17.19■□□□□ 0.34
TDP1-216ENST00000556867 MED6O75586 246 aa17.18■□□□□ 0.34
TDP1-216ENST00000556867 CD81P60033 236 aa17.18■□□□□ 0.34
TDP1-216ENST00000556867 ETFRF1Q6IPR1 90 aa17.18■□□□□ 0.34
TDP1-216ENST00000556867 PRSS54Q6PEW0 395 aa17.18■□□□□ 0.34
TDP1-216ENST00000556867 TOMM20LQ6UXN7 152 aa17.18■□□□□ 0.34
TDP1-216ENST00000556867 TMEM116Q8NCL8 245 aa17.18■□□□□ 0.34
TDP1-216ENST00000556867 NEURL2Q9BR09 285 aa17.18■□□□□ 0.34
TDP1-216ENST00000556867 TRAV30A0A087WSZ9 112 aa17.17■□□□□ 0.34
TDP1-216ENST00000556867 IGHV7-4-1A0A0J9YVY3 117 aa17.17■□□□□ 0.34
TDP1-216ENST00000556867 SCAF4O95104 1147 aaKnown RBP17.17■□□□□ 0.34
TDP1-216ENST00000556867 RND2P52198 227 aa17.17■□□□□ 0.34
TDP1-216ENST00000556867 ASAH1Q13510 395 aa17.17■□□□□ 0.34
TDP1-216ENST00000556867 RBPMS2Q6ZRY4 209 aaKnown RBP17.17■□□□□ 0.34
TDP1-216ENST00000556867 MITD1Q8WV92 249 aa17.17■□□□□ 0.34
TDP1-216ENST00000556867 ASCL2Q99929 193 aa17.17■□□□□ 0.34
TDP1-216ENST00000556867 GINS3Q9BRX5 216 aa17.17■□□□□ 0.34
TDP1-216ENST00000556867 ZFAND3Q9H8U3 227 aa17.17■□□□□ 0.34
TDP1-216ENST00000556867 NUDT15Q9NV35 164 aa17.17■□□□□ 0.34
TDP1-216ENST00000556867 SMPXQ9UHP9 88 aa17.17■□□□□ 0.34
TDP1-216ENST00000556867 PUS1Q9Y606 427 aaKnown RBP eCLIP17.17■□□□□ 0.34
TDP1-216ENST00000556867 UPK1BO75841 260 aa17.16■□□□□ 0.34
TDP1-216ENST00000556867 IFNA21P01568 189 aa17.16■□□□□ 0.34
TDP1-216ENST00000556867 IGKV1-17P01599 117 aa17.16■□□□□ 0.34
TDP1-216ENST00000556867 CD7P09564 240 aa17.16■□□□□ 0.34
TDP1-216ENST00000556867 IAPPP10997 89 aa17.16■□□□□ 0.34
TDP1-216ENST00000556867 MZT2BQ6NZ67 158 aa17.16■□□□□ 0.34
TDP1-216ENST00000556867 OR52B4Q8NGK2 314 aa17.16■□□□□ 0.34
TDP1-216ENST00000556867 CIB3Q96Q77 187 aaPredicted RBP17.16■□□□□ 0.34
TDP1-216ENST00000556867 TRAV6A0A075B6T7 132 aa17.15■□□□□ 0.34
TDP1-216ENST00000556867 TRAV14DV4A0A0A6YYC5 116 aa17.15■□□□□ 0.34
TDP1-216ENST00000556867 MPTX1A8MV57 137 aa17.15■□□□□ 0.34
TDP1-216ENST00000556867 TSPAN4O14817 238 aa17.15■□□□□ 0.34
TDP1-216ENST00000556867 SYNGR2O43760 224 aa17.15■□□□□ 0.34
TDP1-216ENST00000556867 IFNA4P05014 189 aa17.15■□□□□ 0.34
TDP1-216ENST00000556867 IGLC1P0CG04 106 aa17.15■□□□□ 0.34
TDP1-216ENST00000556867 SLC16A13Q7RTY0 426 aa17.15■□□□□ 0.34
TDP1-216ENST00000556867 SBSPONQ8IVN8 264 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 171.4 ms