RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 NDUFB8O95169 186 aa8.73□□□□□ -1.01
FOXN3-212ENST00000556541 PRH1P02810 166 aa8.73□□□□□ -1.01
FOXN3-212ENST00000556541 RPLP1P05386 114 aaKnown RBP8.73□□□□□ -1.01
FOXN3-212ENST00000556541 RPL12P30050 165 aaKnown RBP8.73□□□□□ -1.01
FOXN3-212ENST00000556541 NUP62P37198 522 aaPredicted RBP8.73□□□□□ -1.01
FOXN3-212ENST00000556541 OPRK1P41145 380 aa8.73□□□□□ -1.01
FOXN3-212ENST00000556541 NPBWR1P48145 328 aa8.73□□□□□ -1.01
FOXN3-212ENST00000556541 MFAP4P55083 255 aa8.73□□□□□ -1.01
FOXN3-212ENST00000556541 EWSR1Q01844 656 aaKnown RBP eCLIP8.73□□□□□ -1.01
FOXN3-212ENST00000556541 Q5BKY6 102 aa8.73□□□□□ -1.01
FOXN3-212ENST00000556541 SPSB3Q6PJ21 355 aa8.73□□□□□ -1.01
FOXN3-212ENST00000556541 SLC16A13Q7RTY0 426 aa8.73□□□□□ -1.01
FOXN3-212ENST00000556541 ZNF546Q86UE3 836 aa8.73□□□□□ -1.01
FOXN3-212ENST00000556541 SCARB1Q8WTV0 552 aa8.73□□□□□ -1.01
FOXN3-212ENST00000556541 DCUN1D4Q92564 292 aa8.73□□□□□ -1.01
FOXN3-212ENST00000556541 MISP3Q96FF7 219 aa8.73□□□□□ -1.01
FOXN3-212ENST00000556541 HYLS1Q96M11 299 aa8.73□□□□□ -1.01
FOXN3-212ENST00000556541 C21orf62Q9NYP8 219 aa8.73□□□□□ -1.01
FOXN3-212ENST00000556541 HSPB11Q9Y547 144 aa8.73□□□□□ -1.01
FOXN3-212ENST00000556541 COL6A5A8TX70 2615 aa8.73□□□□□ -1.01
FOXN3-212ENST00000556541 TCRBV4S1A1TA0A5B7 111 aa8.72□□□□□ -1.01
FOXN3-212ENST00000556541 ADARB2-AS1A8MUL3 147 aa8.72□□□□□ -1.01
FOXN3-212ENST00000556541 F8W735 103 aaPredicted RBP8.72□□□□□ -1.01
FOXN3-212ENST00000556541 CLN5O75503 358 aa8.72□□□□□ -1.01
FOXN3-212ENST00000556541 SCGB2A1O75556 95 aa8.72□□□□□ -1.01
FOXN3-212ENST00000556541 METTL15P1P0C7V9 234 aa8.72□□□□□ -1.01
FOXN3-212ENST00000556541 CD28P10747 220 aa8.72□□□□□ -1.01
FOXN3-212ENST00000556541 KRTAP10-3P60369 221 aa8.72□□□□□ -1.01
FOXN3-212ENST00000556541 OR2F1Q13607 317 aa8.72□□□□□ -1.01
FOXN3-212ENST00000556541 SHISA2Q6UWI4 295 aa8.72□□□□□ -1.01
FOXN3-212ENST00000556541 C19orf35Q6ZS72 473 aa8.72□□□□□ -1.01
FOXN3-212ENST00000556541 ACOT7LQ6ZUV0 252 aa8.72□□□□□ -1.01
FOXN3-212ENST00000556541 TMEM144Q7Z5S9 345 aa8.72□□□□□ -1.01
FOXN3-212ENST00000556541 HAPLN4Q86UW8 402 aa8.72□□□□□ -1.01
FOXN3-212ENST00000556541 THAP8Q8NA92 274 aa8.72□□□□□ -1.01
FOXN3-212ENST00000556541 INO80EQ8NBZ0 244 aaPredicted RBP8.72□□□□□ -1.01
FOXN3-212ENST00000556541 BSCL2Q96G97 398 aaPredicted RBP8.72□□□□□ -1.01
FOXN3-212ENST00000556541 SLC35E1Q96K37 410 aa8.72□□□□□ -1.01
FOXN3-212ENST00000556541 MS4A10Q96PG2 267 aa8.72□□□□□ -1.01
FOXN3-212ENST00000556541 PARD6GQ9BYG4 376 aaPredicted RBP8.72□□□□□ -1.01
FOXN3-212ENST00000556541 RNF222A6NCQ9 220 aa8.71□□□□□ -1.02
FOXN3-212ENST00000556541 MFSD2BA6NFX1 497 aa8.71□□□□□ -1.02
FOXN3-212ENST00000556541 MPDU1O75352 247 aa8.71□□□□□ -1.02
FOXN3-212ENST00000556541 DFFBO76075 338 aa8.71□□□□□ -1.02
FOXN3-212ENST00000556541 SLC38A11Q08AI6 406 aa8.71□□□□□ -1.02
FOXN3-212ENST00000556541 OR1S2Q8NGQ3 325 aa8.71□□□□□ -1.02
FOXN3-212ENST00000556541 PPP1R14BQ96C90 147 aa8.71□□□□□ -1.02
FOXN3-212ENST00000556541 CCDC140Q96MF4 163 aa8.71□□□□□ -1.02
FOXN3-212ENST00000556541 CITED2Q99967 270 aaPredicted RBP8.71□□□□□ -1.02
FOXN3-212ENST00000556541 TMEM147Q9BVK8 224 aa8.71□□□□□ -1.02
FOXN3-212ENST00000556541 NPVFQ9HCQ7 196 aa8.71□□□□□ -1.02
FOXN3-212ENST00000556541 FXYD6-FXYD2A0A087WZ82 144 aa8.7□□□□□ -1.02
FOXN3-212ENST00000556541 A0A0D9SG52 128 aa8.7□□□□□ -1.02
FOXN3-212ENST00000556541 TAAR5O14804 337 aa8.7□□□□□ -1.02
FOXN3-212ENST00000556541 HSPB1P04792 205 aaKnown RBP8.7□□□□□ -1.02
FOXN3-212ENST00000556541 ARL16Q0P5N6 197 aa8.7□□□□□ -1.02
FOXN3-212ENST00000556541 FHL3Q13643 280 aa8.7□□□□□ -1.02
FOXN3-212ENST00000556541 GAMTQ14353 236 aa8.7□□□□□ -1.02
FOXN3-212ENST00000556541 OR8G2PQ6IF36 304 aa8.7□□□□□ -1.02
FOXN3-212ENST00000556541 C12orf54Q6X4T0 127 aa8.7□□□□□ -1.02
FOXN3-212ENST00000556541 OR11H4Q8NGC9 324 aa8.7□□□□□ -1.02
FOXN3-212ENST00000556541 TRGV9Q99603 122 aa8.7□□□□□ -1.02
FOXN3-212ENST00000556541 GNB4Q9HAV0 340 aa8.7□□□□□ -1.02
FOXN3-212ENST00000556541 UQCC1Q9NVA1 299 aa8.7□□□□□ -1.02
FOXN3-212ENST00000556541 PEF1Q9UBV8 284 aaKnown RBP8.7□□□□□ -1.02
FOXN3-212ENST00000556541 LSM4Q9Y4Z0 139 aaKnown RBP8.7□□□□□ -1.02
FOXN3-212ENST00000556541 STAB1Q9NY15 2570 aa8.69□□□□□ -1.02
FOXN3-212ENST00000556541 TGOLN2O43493 480 aa8.69□□□□□ -1.02
FOXN3-212ENST00000556541 CST7O76096 145 aa8.69□□□□□ -1.02
FOXN3-212ENST00000556541 CFDP00746 253 aaPredicted RBP8.69□□□□□ -1.02
FOXN3-212ENST00000556541 FABP1P07148 127 aa8.69□□□□□ -1.02
FOXN3-212ENST00000556541 IGLC1P0CG04 106 aa8.69□□□□□ -1.02
FOXN3-212ENST00000556541 ZP3P21754 424 aa8.69□□□□□ -1.02
FOXN3-212ENST00000556541 RND2P52198 227 aa8.69□□□□□ -1.02
FOXN3-212ENST00000556541 YPEL3P61236 119 aaPredicted RBP8.69□□□□□ -1.02
FOXN3-212ENST00000556541 NHLH2Q02577 135 aa8.69□□□□□ -1.02
FOXN3-212ENST00000556541 ACSM6Q6P461 480 aa8.69□□□□□ -1.02
FOXN3-212ENST00000556541 LCNL1Q6ZST4 164 aa8.69□□□□□ -1.02
FOXN3-212ENST00000556541 KCNRGQ8N5I3 272 aa8.69□□□□□ -1.02
FOXN3-212ENST00000556541 OR5C1Q8NGR4 320 aa8.69□□□□□ -1.02
FOXN3-212ENST00000556541 SPATA3Q8NHX4 192 aa8.69□□□□□ -1.02
FOXN3-212ENST00000556541 ATP5SQ99766 215 aa8.69□□□□□ -1.02
FOXN3-212ENST00000556541 MFFQ9GZY8 342 aa8.69□□□□□ -1.02
FOXN3-212ENST00000556541 PAIP2BQ9ULR5 123 aaKnown RBP8.69□□□□□ -1.02
FOXN3-212ENST00000556541 WDR83OSQ9Y284 106 aa8.69□□□□□ -1.02
FOXN3-212ENST00000556541 NUPL2O15504 423 aaKnown RBP8.68□□□□□ -1.02
FOXN3-212ENST00000556541 GNG7O60262 68 aa8.68□□□□□ -1.02
FOXN3-212ENST00000556541 GGCTO75223 188 aaKnown RBP8.68□□□□□ -1.02
FOXN3-212ENST00000556541 CTSGP08311 255 aa8.68□□□□□ -1.02
FOXN3-212ENST00000556541 MYCNOSP40205 109 aa8.68□□□□□ -1.02
FOXN3-212ENST00000556541 AP2S1P53680 142 aaPredicted RBP8.68□□□□□ -1.02
FOXN3-212ENST00000556541 SELENOTP62341 195 aa8.68□□□□□ -1.02
FOXN3-212ENST00000556541 RELQ04864 619 aaPredicted RBP8.68□□□□□ -1.02
FOXN3-212ENST00000556541 ZNF266Q14584 549 aa8.68□□□□□ -1.02
FOXN3-212ENST00000556541 ZFP69Q49AA0 526 aa8.68□□□□□ -1.02
FOXN3-212ENST00000556541 TEPPQ6URK8 271 aa8.68□□□□□ -1.02
FOXN3-212ENST00000556541 TREML4Q6UXN2 200 aa8.68□□□□□ -1.02
FOXN3-212ENST00000556541 GPHB5Q86YW7 130 aa8.68□□□□□ -1.02
FOXN3-212ENST00000556541 LILRB2Q8N423 598 aa8.68□□□□□ -1.02
FOXN3-212ENST00000556541 C3orf56Q8N813 242 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms