RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 RAB24Q969Q5 203 aa8.92□□□□□ -0.98
SHMT2-216ENST00000554975 SLC35E1Q96K37 410 aa8.92□□□□□ -0.98
SHMT2-216ENST00000554975 SSX3Q99909 188 aa8.92□□□□□ -0.98
SHMT2-216ENST00000554975 GGTLC1Q9BX51 225 aa8.92□□□□□ -0.98
SHMT2-216ENST00000554975 SDF2L1Q9HCN8 221 aa8.92□□□□□ -0.98
SHMT2-216ENST00000554975 POLR3KQ9Y2Y1 108 aaPredicted RBP8.92□□□□□ -0.98
SHMT2-216ENST00000554975 OR51B2Q9Y5P1 312 aa8.92□□□□□ -0.98
SHMT2-216ENST00000554975 TRAV40A0A0B4J280 105 aa8.91□□□□□ -0.98
SHMT2-216ENST00000554975 PRSS46E5RG02 174 aa8.91□□□□□ -0.98
SHMT2-216ENST00000554975 INS-IGF2F8WCM5 200 aa8.91□□□□□ -0.98
SHMT2-216ENST00000554975 UPK2O00526 184 aa8.91□□□□□ -0.98
SHMT2-216ENST00000554975 UBE2CO00762 179 aa8.91□□□□□ -0.98
SHMT2-216ENST00000554975 CXorf1O96002 111 aa8.91□□□□□ -0.98
SHMT2-216ENST00000554975 RBP4P02753 201 aa8.91□□□□□ -0.98
SHMT2-216ENST00000554975 ZNF134P52741 427 aa8.91□□□□□ -0.98
SHMT2-216ENST00000554975 RHOBP62745 196 aa8.91□□□□□ -0.98
SHMT2-216ENST00000554975 PAX8Q06710 450 aa8.91□□□□□ -0.98
SHMT2-216ENST00000554975 TMEM177Q53S58 311 aa8.91□□□□□ -0.98
SHMT2-216ENST00000554975 FAM53AQ6NSI3 398 aaPredicted RBP8.91□□□□□ -0.98
SHMT2-216ENST00000554975 TEPPQ6URK8 271 aa8.91□□□□□ -0.98
SHMT2-216ENST00000554975 BRD3OSQ6XYD6 125 aa8.91□□□□□ -0.98
SHMT2-216ENST00000554975 IQCF2Q8IXL9 164 aa8.91□□□□□ -0.98
SHMT2-216ENST00000554975 LINC00518Q8N0U6 118 aa8.91□□□□□ -0.98
SHMT2-216ENST00000554975 ZNF383Q8NA42 475 aa8.91□□□□□ -0.98
SHMT2-216ENST00000554975 OR1L8Q8NGR8 309 aa8.91□□□□□ -0.98
SHMT2-216ENST00000554975 ZNF596Q8TC21 504 aa8.91□□□□□ -0.98
SHMT2-216ENST00000554975 ISOC2Q96AB3 205 aa8.91□□□□□ -0.98
SHMT2-216ENST00000554975 HARBI1Q96MB7 349 aa8.91□□□□□ -0.98
SHMT2-216ENST00000554975 OR5B12Q96R08 314 aa8.91□□□□□ -0.98
SHMT2-216ENST00000554975 RNF2Q99496 336 aa8.91□□□□□ -0.98
SHMT2-216ENST00000554975 RNF114Q9Y508 228 aa8.91□□□□□ -0.98
SHMT2-216ENST00000554975 PXMP4Q9Y6I8 212 aa8.91□□□□□ -0.98
SHMT2-216ENST00000554975 A0A087X0M5 115 aa8.9□□□□□ -0.98
SHMT2-216ENST00000554975 A0A1B0GX30 115 aa8.9□□□□□ -0.98
SHMT2-216ENST00000554975 PPP1R2P9O14990 202 aa8.9□□□□□ -0.98
SHMT2-216ENST00000554975 IGKV1D-33P01593 117 aa8.9□□□□□ -0.98
SHMT2-216ENST00000554975 IGKV1-33P01594 117 aa8.9□□□□□ -0.98
SHMT2-216ENST00000554975 RPL29P47914 159 aaKnown RBP8.9□□□□□ -0.98
SHMT2-216ENST00000554975 PROK1P58294 105 aa8.9□□□□□ -0.98
SHMT2-216ENST00000554975 TMEM241Q24JQ0 296 aa8.9□□□□□ -0.98
SHMT2-216ENST00000554975 VMA21Q3ZAQ7 101 aa8.9□□□□□ -0.98
SHMT2-216ENST00000554975 C2orf83Q53S99 150 aa8.9□□□□□ -0.98
SHMT2-216ENST00000554975 SPINK9Q5DT21 86 aa8.9□□□□□ -0.98
SHMT2-216ENST00000554975 SAMD5Q5TGI4 173 aa8.9□□□□□ -0.98
SHMT2-216ENST00000554975 WDR25Q64LD2 544 aaPredicted RBP8.9□□□□□ -0.98
SHMT2-216ENST00000554975 SSX7Q7RTT5 188 aa8.9□□□□□ -0.98
SHMT2-216ENST00000554975 OR10X1Q8NGY0 326 aa8.9□□□□□ -0.98
SHMT2-216ENST00000554975 OR9G1Q8NH87 305 aa8.9□□□□□ -0.98
SHMT2-216ENST00000554975 LINC01006Q8NI28 216 aa8.9□□□□□ -0.98
SHMT2-216ENST00000554975 ANAPC16Q96DE5 110 aa8.9□□□□□ -0.98
SHMT2-216ENST00000554975 YPEL4Q96NS1 127 aa8.9□□□□□ -0.98
SHMT2-216ENST00000554975 COMMD5Q9GZQ3 224 aa8.9□□□□□ -0.98
SHMT2-216ENST00000554975 PRDM13Q9H4Q3 707 aa8.9□□□□□ -0.98
SHMT2-216ENST00000554975 WASHC3Q9Y3C0 194 aa8.9□□□□□ -0.98
SHMT2-216ENST00000554975 AMMECR1Q9Y4X0 333 aaPredicted RBP8.9□□□□□ -0.98
SHMT2-216ENST00000554975 DNAH9Q9NYC9 4486 aa8.89□□□□□ -0.99
SHMT2-216ENST00000554975 TRBV24-1A0A075B6N3 115 aa8.89□□□□□ -0.99
SHMT2-216ENST00000554975 IGHV2-70DA0A0C4DH43 119 aa8.89□□□□□ -0.99
SHMT2-216ENST00000554975 hCG_1809904A0A1W2PP81 198 aa8.89□□□□□ -0.99
SHMT2-216ENST00000554975 A0A1W2PR64 198 aa8.89□□□□□ -0.99
SHMT2-216ENST00000554975 A0A1W2PRV1 198 aa8.89□□□□□ -0.99
SHMT2-216ENST00000554975 C11orf94C9JXX5 98 aa8.89□□□□□ -0.99
SHMT2-216ENST00000554975 H7BYZ3 331 aa8.89□□□□□ -0.99
SHMT2-216ENST00000554975 J3QR06 171 aa8.89□□□□□ -0.99
SHMT2-216ENST00000554975 IL6RP08887 468 aaPredicted RBP8.89□□□□□ -0.99
SHMT2-216ENST00000554975 MC5RP33032 325 aa8.89□□□□□ -0.99
SHMT2-216ENST00000554975 RPS10P46783 165 aaKnown RBP8.89□□□□□ -0.99
SHMT2-216ENST00000554975 SUB1P53999 127 aaKnown RBP eCLIP8.89□□□□□ -0.99
SHMT2-216ENST00000554975 CD81P60033 236 aa8.89□□□□□ -0.99
SHMT2-216ENST00000554975 B2MP61769 119 aa8.89□□□□□ -0.99
SHMT2-216ENST00000554975 S100A12P80511 92 aa8.89□□□□□ -0.99
SHMT2-216ENST00000554975 ERHP84090 104 aaKnown RBP8.89□□□□□ -0.99
SHMT2-216ENST00000554975 PAX2Q02962 417 aa8.89□□□□□ -0.99
SHMT2-216ENST00000554975 ELOBQ15370 118 aa8.89□□□□□ -0.99
SHMT2-216ENST00000554975 ADIRFQ15847 76 aa8.89□□□□□ -0.99
SHMT2-216ENST00000554975 BSXQ3C1V8 233 aa8.89□□□□□ -0.99
SHMT2-216ENST00000554975 KCNIP4Q6PIL6 250 aa8.89□□□□□ -0.99
SHMT2-216ENST00000554975 OR5AN1Q8NGI8 311 aa8.89□□□□□ -0.99
SHMT2-216ENST00000554975 OR4C13Q8NGP0 309 aa8.89□□□□□ -0.99
SHMT2-216ENST00000554975 MRAPQ8TCY5 172 aa8.89□□□□□ -0.99
SHMT2-216ENST00000554975 CACNG8Q8WXS5 425 aa8.89□□□□□ -0.99
SHMT2-216ENST00000554975 H1FXQ92522 213 aaKnown RBP8.89□□□□□ -0.99
SHMT2-216ENST00000554975 OR4F4Q96R69 305 aa8.89□□□□□ -0.99
SHMT2-216ENST00000554975 PARLQ9H300 379 aa8.89□□□□□ -0.99
SHMT2-216ENST00000554975 CTSZQ9UBR2 303 aa8.89□□□□□ -0.99
SHMT2-216ENST00000554975 LSM4Q9Y4Z0 139 aaKnown RBP8.89□□□□□ -0.99
SHMT2-216ENST00000554975 ELOA3CA0A087WX78 387 aaPredicted RBP8.88□□□□□ -0.99
SHMT2-216ENST00000554975 C5orf52A6NGY3 159 aa8.88□□□□□ -0.99
SHMT2-216ENST00000554975 H0YJW9 148 aa8.88□□□□□ -0.99
SHMT2-216ENST00000554975 AP4M1O00189 453 aa8.88□□□□□ -0.99
SHMT2-216ENST00000554975 RRHO14718 337 aa8.88□□□□□ -0.99
SHMT2-216ENST00000554975 ENSAO43768 121 aaKnown RBP8.88□□□□□ -0.99
SHMT2-216ENST00000554975 CLN5O75503 358 aa8.88□□□□□ -0.99
SHMT2-216ENST00000554975 STAG3L2P0CL84 134 aa8.88□□□□□ -0.99
SHMT2-216ENST00000554975 STAG3L3P0CL85 134 aa8.88□□□□□ -0.99
SHMT2-216ENST00000554975 SAA1P0DJI8 122 aaPredicted RBP8.88□□□□□ -0.99
SHMT2-216ENST00000554975 TAS2R45P59539 299 aa8.88□□□□□ -0.99
SHMT2-216ENST00000554975 RPL8P62917 257 aaKnown RBP8.88□□□□□ -0.99
SHMT2-216ENST00000554975 ZNF674Q2M3X9 581 aa8.88□□□□□ -0.99
SHMT2-216ENST00000554975 HLA-DRB5Q30154 266 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms