RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 SERPINE2P07093 398 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 GNB3P16520 340 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 C4BPBP20851 252 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 TALDO1P37837 337 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 MFAP4P55083 255 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 WNT4P56705 351 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 NUTF2P61970 127 aaKnown RBP3.4□□□□□ -1.87
ATXN3-229ENST00000554672 EIF4EBP1Q13541 118 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-229ENST00000554672 OXA1LQ15070 435 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 RCN1Q15293 331 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 HSD17B12Q53GQ0 312 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 UBE2UQ5VVX9 321 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 C8orf59Q8N0T1 100 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-229ENST00000554672 LYPD1Q8N2G4 141 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 FAM24BQ8N5W8 94 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 OR10W1Q8NGF6 305 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 MAFIPQ8WZ33 124 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 RAB3CQ96E17 227 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 GRAMD2BQ96HH9 432 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 ZNF414Q96IQ9 312 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 GINS3Q9BRX5 216 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 ATG101Q9BSB4 218 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 NXF2Q9GZY0 626 aaKnown RBP3.4□□□□□ -1.87
ATXN3-229ENST00000554672 TMEM231Q9H6L2 316 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 PLGRKTQ9HBL7 147 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 RABAC1Q9UI14 185 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 RAB22AQ9UL26 194 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 SPATA2Q9UM82 520 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 F11RQ9Y624 299 aaKnown RBP3.4□□□□□ -1.87
ATXN3-229ENST00000554672 DMBT1Q9UGM3 2413 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-229ENST00000554672 TRAV3A0A0B4J244 114 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 A0A1W2PS18 150 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 KNCNA6PVL3 124 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 K7EIM0 57 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 K7EQG2 157 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 RBFOX2O43251 390 aaKnown RBP eCLIP3.39□□□□□ -1.87
ATXN3-229ENST00000554672 HPRT1P00492 218 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 APOHP02749 345 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-229ENST00000554672 UCHL1P09936 223 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 NQO2P16083 231 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 NFYAP23511 347 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-229ENST00000554672 GADD45AP24522 165 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 FGF9P31371 208 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-229ENST00000554672 EMP1P54849 157 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 TAS2R31P59538 309 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 WT1-ASQ06250 92 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 INSL4Q14641 139 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 RAB11BQ15907 218 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 POU2AF1Q16633 256 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 TIMM50Q3ZCQ8 353 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 ACTL10Q5JWF8 245 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 LCE1EQ5T753 118 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 ZNF773Q6PK81 442 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 TOMM20LQ6UXN7 152 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 SPAG16Q8N0X2 631 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 C15orf53Q8NAA6 179 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 OR1L8Q8NGR8 309 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 OR10R2Q8NGX6 335 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 FRZBQ92765 325 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 FAM3DQ96BQ1 224 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 C18orf15Q96N68 181 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 RAB40CQ96S21 281 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 NIPSNAP3BQ9BS92 247 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 DCSTAMPQ9H295 470 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 NDUFA4L2Q9NRX3 87 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 TAS2R8Q9NYW2 309 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 MSRB1Q9NZV6 116 aa3.39□□□□□ -1.87
ATXN3-229ENST00000554672 AK6Q9Y3D8 172 aaKnown RBP3.39□□□□□ -1.87
ATXN3-229ENST00000554672 A0A075B6Q4 140 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 IGKV1D-8A0A087WSZ0 117 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 IGKV1D-13A0A0B4J2D9 117 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 IGHV3-66A0A0C4DH42 116 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 MFNGO00587 321 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 MYL12BO14950 172 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 IGKV1-13P0DP09 117 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 HTN3P15516 51 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 HIST1H1DP16402 221 aaKnown RBP3.38□□□□□ -1.87
ATXN3-229ENST00000554672 NPPCP23582 126 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 DTYMKP23919 212 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 PSMA1P25786 263 aaKnown RBP3.38□□□□□ -1.87
ATXN3-229ENST00000554672 CLDN12P56749 244 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 ARL6IP1Q15041 203 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 SPHARQ15513 63 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 TRAM1Q15629 374 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 MSMO1Q15800 293 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 Q5VSD8 79 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 TMEM88Q6PEY1 159 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 CNIH2Q6PI25 160 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 GSG1LQ6UXU4 331 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 ZNF705AQ6ZN79 300 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-229ENST00000554672 TMEM91Q6ZNR0 172 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 PRSS48Q7RTY5 328 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 CADM3Q8N126 398 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 DMBX1Q8NFW5 382 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 STXBP6Q8NFX7 210 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 OR1P1Q8NH06 330 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 ZNRF2Q8NHG8 242 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 LSM10Q969L4 123 aaKnown RBP3.38□□□□□ -1.87
ATXN3-229ENST00000554672 SLC25A46Q96AG3 418 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 MND1Q9BWT6 205 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms