RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 INMT-MINDY4F8WBC2 141 aa6.56□□□□□ -1.36
ACTN1-213ENST00000554508 INS-IGF2F8WCM5 200 aa6.56□□□□□ -1.36
ACTN1-213ENST00000554508 K7EMT4 169 aa6.56□□□□□ -1.36
ACTN1-213ENST00000554508 PTTG1O95997 202 aa6.56□□□□□ -1.36
ACTN1-213ENST00000554508 IFNA17P01571 189 aa6.56□□□□□ -1.36
ACTN1-213ENST00000554508 HOXB5P09067 269 aa6.56□□□□□ -1.36
ACTN1-213ENST00000554508 CD7P09564 240 aa6.56□□□□□ -1.36
ACTN1-213ENST00000554508 P0C879 139 aa6.56□□□□□ -1.36
ACTN1-213ENST00000554508 MFAP4P55083 255 aa6.56□□□□□ -1.36
ACTN1-213ENST00000554508 Q56UQ5 140 aa6.56□□□□□ -1.36
ACTN1-213ENST00000554508 UNQ9165/PRO28630Q6UXU0 137 aa6.56□□□□□ -1.36
ACTN1-213ENST00000554508 LINC00322Q6ZN03 302 aaPredicted RBP6.56□□□□□ -1.36
ACTN1-213ENST00000554508 Q6ZRM9 215 aa6.56□□□□□ -1.36
ACTN1-213ENST00000554508 RBPMS2Q6ZRY4 209 aaKnown RBP6.56□□□□□ -1.36
ACTN1-213ENST00000554508 TMEM61Q8N0U2 210 aa6.56□□□□□ -1.36
ACTN1-213ENST00000554508 MUC7Q8TAX7 377 aa6.56□□□□□ -1.36
ACTN1-213ENST00000554508 CACNG8Q8WXS5 425 aa6.56□□□□□ -1.36
ACTN1-213ENST00000554508 TMEM190Q8WZ59 177 aa6.56□□□□□ -1.36
ACTN1-213ENST00000554508 WDR89Q96FK6 387 aaPredicted RBP6.56□□□□□ -1.36
ACTN1-213ENST00000554508 CHRDL1Q9BU40 450 aa6.56□□□□□ -1.36
ACTN1-213ENST00000554508 PLEKHA3Q9HB20 300 aa6.56□□□□□ -1.36
ACTN1-213ENST00000554508 GPN1Q9HCN4 374 aaPredicted RBP6.56□□□□□ -1.36
ACTN1-213ENST00000554508 DAZ1Q9NQZ3 744 aaKnown RBP6.56□□□□□ -1.36
ACTN1-213ENST00000554508 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.56□□□□□ -1.36
ACTN1-213ENST00000554508 CACNG5Q9UF02 275 aa6.56□□□□□ -1.36
ACTN1-213ENST00000554508 KMT2CQ8NEZ4 4911 aaKnown RBP6.56□□□□□ -1.36
ACTN1-213ENST00000554508 DYNC2H1Q8NCM8 4307 aaKnown RBP6.56□□□□□ -1.36
ACTN1-213ENST00000554508 IGHV3-35A0A0C4DH35 117 aa6.55□□□□□ -1.36
ACTN1-213ENST00000554508 F8W735 103 aaPredicted RBP6.55□□□□□ -1.36
ACTN1-213ENST00000554508 I3L2K1 104 aa6.55□□□□□ -1.36
ACTN1-213ENST00000554508 NUPL2O15504 423 aaKnown RBP6.55□□□□□ -1.36
ACTN1-213ENST00000554508 ST8SIA3O43173 380 aa6.55□□□□□ -1.36
ACTN1-213ENST00000554508 ADAP1O75689 374 aa6.55□□□□□ -1.36
ACTN1-213ENST00000554508 NXPH3O95157 252 aa6.55□□□□□ -1.36
ACTN1-213ENST00000554508 IFNA21P01568 189 aa6.55□□□□□ -1.36
ACTN1-213ENST00000554508 CTSGP08311 255 aa6.55□□□□□ -1.36
ACTN1-213ENST00000554508 SULT1A3P0DMM9 295 aa6.55□□□□□ -1.36
ACTN1-213ENST00000554508 SULT1A4P0DMN0 295 aa6.55□□□□□ -1.36
ACTN1-213ENST00000554508 SNCAP37840 140 aa6.55□□□□□ -1.36
ACTN1-213ENST00000554508 SUB1P53999 127 aaKnown RBP eCLIP6.55□□□□□ -1.36
ACTN1-213ENST00000554508 RELQ04864 619 aaPredicted RBP6.55□□□□□ -1.36
ACTN1-213ENST00000554508 SMCO1Q147U7 214 aa6.55□□□□□ -1.36
ACTN1-213ENST00000554508 RGS21Q2M5E4 152 aa6.55□□□□□ -1.36
ACTN1-213ENST00000554508 SPINK9Q5DT21 86 aa6.55□□□□□ -1.36
ACTN1-213ENST00000554508 LAMTOR1Q6IAA8 161 aa6.55□□□□□ -1.36
ACTN1-213ENST00000554508 BTNL8Q6UX41 500 aa6.55□□□□□ -1.36
ACTN1-213ENST00000554508 DEFB125Q8N687 156 aa6.55□□□□□ -1.36
ACTN1-213ENST00000554508 LRTM2Q8N967 370 aa6.55□□□□□ -1.36
ACTN1-213ENST00000554508 UBAC2Q8NBM4 344 aa6.55□□□□□ -1.36
ACTN1-213ENST00000554508 OR1S1Q8NH92 325 aa6.55□□□□□ -1.36
ACTN1-213ENST00000554508 ZNF431Q8TF32 576 aaPredicted RBP6.55□□□□□ -1.36
ACTN1-213ENST00000554508 MITD1Q8WV92 249 aa6.55□□□□□ -1.36
ACTN1-213ENST00000554508 MISP3Q96FF7 219 aa6.55□□□□□ -1.36
ACTN1-213ENST00000554508 MARVELD1Q9BSK0 173 aa6.55□□□□□ -1.36
ACTN1-213ENST00000554508 SRD5A3Q9H8P0 318 aa6.55□□□□□ -1.36
ACTN1-213ENST00000554508 TMED3Q9Y3Q3 217 aa6.55□□□□□ -1.36
ACTN1-213ENST00000554508 A0A1B0GU03 582 aa6.54□□□□□ -1.36
ACTN1-213ENST00000554508 C15orf62A8K5M9 175 aa6.54□□□□□ -1.36
ACTN1-213ENST00000554508 TSPAN4O14817 238 aa6.54□□□□□ -1.36
ACTN1-213ENST00000554508 PRAF2O60831 178 aa6.54□□□□□ -1.36
ACTN1-213ENST00000554508 SCAF4O95104 1147 aaKnown RBP6.54□□□□□ -1.36
ACTN1-213ENST00000554508 MT-CO2P00403 227 aa6.54□□□□□ -1.36
ACTN1-213ENST00000554508 IL5P05113 134 aa6.54□□□□□ -1.36
ACTN1-213ENST00000554508 LYL1P12980 280 aa6.54□□□□□ -1.36
ACTN1-213ENST00000554508 ADMP35318 185 aa6.54□□□□□ -1.36
ACTN1-213ENST00000554508 HOXA1P49639 335 aaPredicted RBP6.54□□□□□ -1.36
ACTN1-213ENST00000554508 NMSQ5H8A3 153 aa6.54□□□□□ -1.36
ACTN1-213ENST00000554508 GGNBP1Q5YKI7 109 aa6.54□□□□□ -1.36
ACTN1-213ENST00000554508 C12orf45Q8N5I9 185 aaPredicted RBP6.54□□□□□ -1.36
ACTN1-213ENST00000554508 SPAG8Q99932 426 aaPredicted RBP6.54□□□□□ -1.36
ACTN1-213ENST00000554508 C20orf24Q9BUV8 137 aa6.54□□□□□ -1.36
ACTN1-213ENST00000554508 ENY2Q9NPA8 101 aa6.54□□□□□ -1.36
ACTN1-213ENST00000554508 RBMY1BA6NDE4 496 aaKnown RBP6.53□□□□□ -1.36
ACTN1-213ENST00000554508 RBMY1EA6NEQ0 496 aaKnown RBP6.53□□□□□ -1.36
ACTN1-213ENST00000554508 CEBPZOSA8MTT3 80 aa6.53□□□□□ -1.36
ACTN1-213ENST00000554508 FAM25EA8MYX2 175 aa6.53□□□□□ -1.36
ACTN1-213ENST00000554508 CORTO00230 105 aa6.53□□□□□ -1.36
ACTN1-213ENST00000554508 CCSO14618 274 aa6.53□□□□□ -1.36
ACTN1-213ENST00000554508 GNG7O60262 68 aa6.53□□□□□ -1.36
ACTN1-213ENST00000554508 RBMY1DP0C7P1 496 aaKnown RBP6.53□□□□□ -1.36
ACTN1-213ENST00000554508 NPBWR1P48145 328 aa6.53□□□□□ -1.36
ACTN1-213ENST00000554508 SPCS3P61009 180 aa6.53□□□□□ -1.36
ACTN1-213ENST00000554508 AARDQ4LEZ3 155 aa6.53□□□□□ -1.36
ACTN1-213ENST00000554508 CASC10Q5T4H9 136 aa6.53□□□□□ -1.36
ACTN1-213ENST00000554508 PVRIGQ6DKI7 326 aa6.53□□□□□ -1.36
ACTN1-213ENST00000554508 OR52E5Q8NH55 327 aa6.53□□□□□ -1.36
ACTN1-213ENST00000554508 PINX1Q96BK5 328 aaKnown RBP6.53□□□□□ -1.36
ACTN1-213ENST00000554508 HIPK2Q9H2X6 1198 aa6.53□□□□□ -1.36
ACTN1-213ENST00000554508 EDA2RQ9HAV5 297 aa6.53□□□□□ -1.36
ACTN1-213ENST00000554508 HEYLQ9NQ87 328 aaPredicted RBP6.53□□□□□ -1.36
ACTN1-213ENST00000554508 CACFD1Q9UGQ2 172 aa6.53□□□□□ -1.36
ACTN1-213ENST00000554508 SELENOKQ9Y6D0 94 aa6.53□□□□□ -1.36
ACTN1-213ENST00000554508 NBEAL2Q6ZNJ1 2754 aa6.52□□□□□ -1.37
ACTN1-213ENST00000554508 LOC102724200A0A096LPH7 203 aaPredicted RBP6.52□□□□□ -1.37
ACTN1-213ENST00000554508 TRAV14DV4A0A0A6YYC5 116 aa6.52□□□□□ -1.37
ACTN1-213ENST00000554508 IGHV7-4-1A0A0J9YVY3 117 aa6.52□□□□□ -1.37
ACTN1-213ENST00000554508 C5orf51A6NDU8 294 aa6.52□□□□□ -1.37
ACTN1-213ENST00000554508 OR4C46A6NHA9 309 aa6.52□□□□□ -1.37
ACTN1-213ENST00000554508 MPTX1A8MV57 137 aa6.52□□□□□ -1.37
ACTN1-213ENST00000554508 SNRPGP15A8MWD9 76 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms