RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 hDV102S1A0JD36 115 aa13.85□□□□□ -0.19
PPP4R3A-202ENST00000554390 GAGE12BA1L429 117 aa13.85□□□□□ -0.19
PPP4R3A-202ENST00000554390 GGTLC3B5MD39 225 aa13.85□□□□□ -0.19
PPP4R3A-202ENST00000554390 SSBP4Q9BWG4 385 aaPredicted RBP13.85□□□□□ -0.19
PPP4R3A-202ENST00000554390 TMEM167BQ9NRX6 74 aa13.85□□□□□ -0.19
PPP4R3A-202ENST00000554390 PTPRBP23467 1997 aa13.85□□□□□ -0.19
PPP4R3A-202ENST00000554390 AKAP13Q12802 2813 aa13.85□□□□□ -0.19
PPP4R3A-202ENST00000554390 KLRC4-KLRK1H3BQV0 150 aa13.85□□□□□ -0.19
PPP4R3A-202ENST00000554390 C1orf210Q8IVY1 113 aa13.85□□□□□ -0.19
PPP4R3A-202ENST00000554390 OR2T6Q8NHC8 308 aa13.85□□□□□ -0.19
PPP4R3A-202ENST00000554390 ST20Q9HBF5 79 aa13.85□□□□□ -0.19
PPP4R3A-202ENST00000554390 SH2D7A6NKC9 451 aaPredicted RBP13.84□□□□□ -0.19
PPP4R3A-202ENST00000554390 K7ERU9 68 aa13.84□□□□□ -0.19
PPP4R3A-202ENST00000554390 CECR9P0C854 216 aa13.84□□□□□ -0.19
PPP4R3A-202ENST00000554390 PPOXP50336 477 aa13.84□□□□□ -0.19
PPP4R3A-202ENST00000554390 RAB31Q13636 194 aa13.84□□□□□ -0.19
PPP4R3A-202ENST00000554390 KLF5Q13887 457 aaPredicted RBP13.84□□□□□ -0.19
PPP4R3A-202ENST00000554390 HES3Q5TGS1 186 aa13.84□□□□□ -0.19
PPP4R3A-202ENST00000554390 ZNF503Q96F45 646 aa13.84□□□□□ -0.19
PPP4R3A-202ENST00000554390 IGF2BP2-AS1Q96M15 143 aa13.84□□□□□ -0.19
PPP4R3A-202ENST00000554390 NCOR1P1Q9H4R4 102 aa13.84□□□□□ -0.19
PPP4R3A-202ENST00000554390 OR7C2O60412 319 aa13.84□□□□□ -0.19
PPP4R3A-202ENST00000554390 ACP1P24666 158 aa13.84□□□□□ -0.19
PPP4R3A-202ENST00000554390 CCL11P51671 97 aa13.84□□□□□ -0.19
PPP4R3A-202ENST00000554390 PRR20EP86478 221 aa13.84□□□□□ -0.19
PPP4R3A-202ENST00000554390 PRR20CP86479 221 aa13.84□□□□□ -0.19
PPP4R3A-202ENST00000554390 PRR20DP86480 221 aa13.84□□□□□ -0.19
PPP4R3A-202ENST00000554390 PRR20BP86481 221 aa13.84□□□□□ -0.19
PPP4R3A-202ENST00000554390 PRR20AP86496 221 aa13.84□□□□□ -0.19
PPP4R3A-202ENST00000554390 PSG9Q00887 426 aa13.84□□□□□ -0.19
PPP4R3A-202ENST00000554390 WIPF2Q8TF74 440 aaPredicted RBP13.84□□□□□ -0.19
PPP4R3A-202ENST00000554390 PLEKHA3Q9HB20 300 aa13.84□□□□□ -0.19
PPP4R3A-202ENST00000554390 TMEM140Q9NV12 185 aa13.84□□□□□ -0.19
PPP4R3A-202ENST00000554390 SLC25A10Q9UBX3 287 aaPredicted RBP13.84□□□□□ -0.19
PPP4R3A-202ENST00000554390 IQCF6A8MYZ5 107 aa13.83□□□□□ -0.19
PPP4R3A-202ENST00000554390 PRDX2P32119 198 aa13.83□□□□□ -0.19
PPP4R3A-202ENST00000554390 GABRA6Q16445 453 aa13.83□□□□□ -0.19
PPP4R3A-202ENST00000554390 SLC35E4Q6ICL7 350 aa13.83□□□□□ -0.19
PPP4R3A-202ENST00000554390 SPRY4Q9C004 299 aa13.83□□□□□ -0.19
PPP4R3A-202ENST00000554390 ZNF355PQ9NSJ1 428 aa13.83□□□□□ -0.19
PPP4R3A-202ENST00000554390 TCF19Q9Y242 345 aa13.83□□□□□ -0.19
PPP4R3A-202ENST00000554390 OR52E5Q8NH55 327 aa13.83□□□□□ -0.2
PPP4R3A-202ENST00000554390 SGK494Q96LW2 274 aa13.83□□□□□ -0.2
PPP4R3A-202ENST00000554390 SPINT2O43291 252 aa13.83□□□□□ -0.2
PPP4R3A-202ENST00000554390 TMEM11P17152 192 aa13.83□□□□□ -0.2
PPP4R3A-202ENST00000554390 SLC25A34Q6PIV7 304 aa13.83□□□□□ -0.2
PPP4R3A-202ENST00000554390 LINC00479Q96M42 142 aa13.83□□□□□ -0.2
PPP4R3A-202ENST00000554390 MEGF9Q9H1U4 602 aa13.83□□□□□ -0.2
PPP4R3A-202ENST00000554390 KLF13Q9Y2Y9 288 aaPredicted RBP13.83□□□□□ -0.2
PPP4R3A-202ENST00000554390 DYSFO75923 2080 aa13.83□□□□□ -0.2
PPP4R3A-202ENST00000554390 IGKV1D-17A0A075B6S4 117 aa13.82□□□□□ -0.2
PPP4R3A-202ENST00000554390 C15orf65H3BRN8 121 aa13.82□□□□□ -0.2
PPP4R3A-202ENST00000554390 CD46P15529 392 aa13.82□□□□□ -0.2
PPP4R3A-202ENST00000554390 CAMPP49913 170 aa13.82□□□□□ -0.2
PPP4R3A-202ENST00000554390 TMEM164Q5U3C3 297 aa13.82□□□□□ -0.2
PPP4R3A-202ENST00000554390 RASL11AQ6T310 242 aa13.82□□□□□ -0.2
PPP4R3A-202ENST00000554390 MDS2Q8NDY4 140 aa13.82□□□□□ -0.2
PPP4R3A-202ENST00000554390 NUP35Q8NFH5 326 aa13.82□□□□□ -0.2
PPP4R3A-202ENST00000554390 ZC2HC1AQ96GY0 325 aa13.82□□□□□ -0.2
PPP4R3A-202ENST00000554390 URB1-AS1Q96HZ7 61 aa13.82□□□□□ -0.2
PPP4R3A-202ENST00000554390 NABP2Q9BQ15 211 aa13.82□□□□□ -0.2
PPP4R3A-202ENST00000554390 COMMD5Q9GZQ3 224 aa13.82□□□□□ -0.2
PPP4R3A-202ENST00000554390 TRAV8-6A0A0B4J262 113 aa13.82□□□□□ -0.2
PPP4R3A-202ENST00000554390 SPRY3O43610 288 aa13.82□□□□□ -0.2
PPP4R3A-202ENST00000554390 RIPPLY3P57055 190 aa13.82□□□□□ -0.2
PPP4R3A-202ENST00000554390 C12orf54Q6X4T0 127 aa13.82□□□□□ -0.2
PPP4R3A-202ENST00000554390 UBALD2Q8IYN6 164 aa13.82□□□□□ -0.2
PPP4R3A-202ENST00000554390 RND1Q92730 232 aa13.82□□□□□ -0.2
PPP4R3A-202ENST00000554390 ACACAQ13085 2346 aa13.81□□□□□ -0.2
PPP4R3A-202ENST00000554390 HOXC12P31275 282 aa13.81□□□□□ -0.2
PPP4R3A-202ENST00000554390 PEAR1Q5VY43 1037 aaPredicted RBP13.81□□□□□ -0.2
PPP4R3A-202ENST00000554390 LINC00173Q6ZV60 143 aa13.81□□□□□ -0.2
PPP4R3A-202ENST00000554390 C9orf106Q8NAJ2 232 aa13.81□□□□□ -0.2
PPP4R3A-202ENST00000554390 FAM90A9PA6NNJ1 464 aa13.81□□□□□ -0.2
PPP4R3A-202ENST00000554390 NKX2-8O15522 239 aa13.81□□□□□ -0.2
PPP4R3A-202ENST00000554390 ERVK-16P61578 105 aa13.81□□□□□ -0.2
PPP4R3A-202ENST00000554390 FAM120AOSQ5T036 256 aa13.81□□□□□ -0.2
PPP4R3A-202ENST00000554390 FAM71F2Q6NXP2 309 aa13.8□□□□□ -0.2
PPP4R3A-202ENST00000554390 MOGAT3Q86VF5 341 aa13.8□□□□□ -0.2
PPP4R3A-202ENST00000554390 SMIM12Q96EX1 92 aa13.8□□□□□ -0.2
PPP4R3A-202ENST00000554390 C21orf140B9A014 251 aa13.8□□□□□ -0.2
PPP4R3A-202ENST00000554390 SAP30O75446 220 aa13.8□□□□□ -0.2
PPP4R3A-202ENST00000554390 ZNF841Q6ZN19 808 aa13.8□□□□□ -0.2
PPP4R3A-202ENST00000554390 S1PR3Q99500 378 aa13.8□□□□□ -0.2
PPP4R3A-202ENST00000554390 SYS1-DBNDD2H3BUS1 97 aa13.8□□□□□ -0.2
PPP4R3A-202ENST00000554390 CRXO43186 299 aaPredicted RBP13.8□□□□□ -0.2
PPP4R3A-202ENST00000554390 SARAFQ96BY9 339 aa13.8□□□□□ -0.2
PPP4R3A-202ENST00000554390 MBD6Q96DN6 1003 aa13.8□□□□□ -0.2
PPP4R3A-202ENST00000554390 CXXC4Q9H2H0 198 aa13.8□□□□□ -0.2
PPP4R3A-202ENST00000554390 RPH3ALQ9UNE2 315 aa13.8□□□□□ -0.2
PPP4R3A-202ENST00000554390 CD5LO43866 347 aa13.79□□□□□ -0.2
PPP4R3A-202ENST00000554390 WT1P19544 449 aaPredicted RBP13.79□□□□□ -0.2
PPP4R3A-202ENST00000554390 SMIM21Q3B7S5 101 aa13.79□□□□□ -0.2
PPP4R3A-202ENST00000554390 OR2V2Q96R30 315 aa13.79□□□□□ -0.2
PPP4R3A-202ENST00000554390 ANKRD11Q6UB99 2663 aaPredicted RBP13.79□□□□□ -0.2
PPP4R3A-202ENST00000554390 COL27A1Q8IZC6 1860 aaPredicted RBP13.79□□□□□ -0.2
PPP4R3A-202ENST00000554390 DCHS2Q6V1P9 2916 aa13.79□□□□□ -0.2
PPP4R3A-202ENST00000554390 A0A087X0K7 114 aa13.79□□□□□ -0.2
PPP4R3A-202ENST00000554390 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.79□□□□□ -0.2
PPP4R3A-202ENST00000554390 OR2J3O76001 311 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms