RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 SPRY3O43610 288 aa10.02□□□□□ -0.8
SHMT2-207ENST00000553837 OR9G9P0C7N8 305 aa10.02□□□□□ -0.8
SHMT2-207ENST00000553837 AREGP15514 252 aa10.02□□□□□ -0.8
SHMT2-207ENST00000553837 GNG4P50150 75 aa10.02□□□□□ -0.8
SHMT2-207ENST00000553837 LCN12Q6JVE5 192 aa10.02□□□□□ -0.8
SHMT2-207ENST00000553837 DUX4L9Q6RFH8 374 aaPredicted RBP10.02□□□□□ -0.8
SHMT2-207ENST00000553837 Q6ZS92 163 aa10.02□□□□□ -0.8
SHMT2-207ENST00000553837 ATP6V0BQ99437 205 aa10.02□□□□□ -0.8
SHMT2-207ENST00000553837 HELTA6NFD8 242 aa10.02□□□□□ -0.81
SHMT2-207ENST00000553837 TAX1BP3O14907 124 aa10.02□□□□□ -0.81
SHMT2-207ENST00000553837 GOSR1O95249 250 aa10.02□□□□□ -0.81
SHMT2-207ENST00000553837 IGLL1P15814 213 aa10.02□□□□□ -0.81
SHMT2-207ENST00000553837 LOXL3P58215 753 aa10.02□□□□□ -0.81
SHMT2-207ENST00000553837 RPL39P5Q59GN2 51 aa10.02□□□□□ -0.81
SHMT2-207ENST00000553837 TREML4Q6UXN2 200 aa10.02□□□□□ -0.81
SHMT2-207ENST00000553837 ITLN1Q8WWA0 313 aa10.02□□□□□ -0.81
SHMT2-207ENST00000553837 DSCAMO60469 2012 aa10.02□□□□□ -0.81
SHMT2-207ENST00000553837 RIF1Q5UIP0 2472 aaKnown RBP10.01□□□□□ -0.81
SHMT2-207ENST00000553837 ICE1Q9Y2F5 2266 aa10.01□□□□□ -0.81
SHMT2-207ENST00000553837 SPINT2O43291 252 aa10.01□□□□□ -0.81
SHMT2-207ENST00000553837 LHBP01229 141 aa10.01□□□□□ -0.81
SHMT2-207ENST00000553837 DUTP33316 252 aaKnown RBP10.01□□□□□ -0.81
SHMT2-207ENST00000553837 TBR1Q16650 682 aa10.01□□□□□ -0.81
SHMT2-207ENST00000553837 TIMM23BQ5SRD1 257 aa10.01□□□□□ -0.81
SHMT2-207ENST00000553837 DEFB125Q8N687 156 aa10.01□□□□□ -0.81
SHMT2-207ENST00000553837 OR10W1Q8NGF6 305 aa10.01□□□□□ -0.81
SHMT2-207ENST00000553837 OR8B3Q8NGG8 313 aa10.01□□□□□ -0.81
SHMT2-207ENST00000553837 OR8B2Q96RD0 313 aa10.01□□□□□ -0.81
SHMT2-207ENST00000553837 MUC6Q6W4X9 2439 aa10.01□□□□□ -0.81
SHMT2-207ENST00000553837 FAM181BA6NEQ2 426 aa10.01□□□□□ -0.81
SHMT2-207ENST00000553837 HSBP1O75506 76 aa10.01□□□□□ -0.81
SHMT2-207ENST00000553837 ADH4P08319 380 aa10.01□□□□□ -0.81
SHMT2-207ENST00000553837 CFHR2P36980 270 aa10.01□□□□□ -0.81
SHMT2-207ENST00000553837 FAM27E3Q08E93 113 aa10.01□□□□□ -0.81
SHMT2-207ENST00000553837 Q56UQ5 140 aa10.01□□□□□ -0.81
SHMT2-207ENST00000553837 MIC13Q5XKP0 118 aa10.01□□□□□ -0.81
SHMT2-207ENST00000553837 VKORC1L1Q8N0U8 176 aa10.01□□□□□ -0.81
SHMT2-207ENST00000553837 FER1L6-AS1Q8NA97 138 aa10.01□□□□□ -0.81
SHMT2-207ENST00000553837 LEAP2Q969E1 77 aa10.01□□□□□ -0.81
SHMT2-207ENST00000553837 HSD17B10Q99714 261 aaKnown RBP10.01□□□□□ -0.81
SHMT2-207ENST00000553837 MGST2Q99735 147 aa10.01□□□□□ -0.81
SHMT2-207ENST00000553837 FAM234AQ9H0X4 552 aa10.01□□□□□ -0.81
SHMT2-207ENST00000553837 SMIM27A0A1W2PRY6 76 aa10□□□□□ -0.81
SHMT2-207ENST00000553837 ISLRO14498 428 aa10□□□□□ -0.81
SHMT2-207ENST00000553837 GLRXP35754 106 aa10□□□□□ -0.81
SHMT2-207ENST00000553837 GPR12P47775 334 aa10□□□□□ -0.81
SHMT2-207ENST00000553837 UBE2G1P62253 170 aa10□□□□□ -0.81
SHMT2-207ENST00000553837 CR1LQ2VPA4 569 aa10□□□□□ -0.81
SHMT2-207ENST00000553837 TIGITQ495A1 244 aa10□□□□□ -0.81
SHMT2-207ENST00000553837 CENPWQ5EE01 88 aa10□□□□□ -0.81
SHMT2-207ENST00000553837 C18orf32Q8TCD1 76 aa10□□□□□ -0.81
SHMT2-207ENST00000553837 GGTLC1Q9BX51 225 aa10□□□□□ -0.81
SHMT2-207ENST00000553837 IFI27L2Q9H2X8 130 aa10□□□□□ -0.81
SHMT2-207ENST00000553837 ZNF331Q9NQX6 463 aaPredicted RBP10□□□□□ -0.81
SHMT2-207ENST00000553837 GNG12Q9UBI6 72 aa10□□□□□ -0.81
SHMT2-207ENST00000553837 OR51B2Q9Y5P1 312 aa10□□□□□ -0.81
SHMT2-207ENST00000553837 HCFC1P51610 2035 aa10□□□□□ -0.81
SHMT2-207ENST00000553837 LOC102724200A0A096LPH7 203 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-207ENST00000553837 M0R2Z0 102 aa9.99□□□□□ -0.81
SHMT2-207ENST00000553837 MGST3O14880 152 aa9.99□□□□□ -0.81
SHMT2-207ENST00000553837 FCGR3BO75015 233 aa9.99□□□□□ -0.81
SHMT2-207ENST00000553837 SMIM17P0DL12 118 aa9.99□□□□□ -0.81
SHMT2-207ENST00000553837 PPIAL4GP0DN37 164 aa9.99□□□□□ -0.81
SHMT2-207ENST00000553837 CGB3P0DN86 165 aa9.99□□□□□ -0.81
SHMT2-207ENST00000553837 CGB7P0DN87 165 aa9.99□□□□□ -0.81
SHMT2-207ENST00000553837 TMPRSS3P57727 454 aa9.99□□□□□ -0.81
SHMT2-207ENST00000553837 SLC35B1P78383 322 aa9.99□□□□□ -0.81
SHMT2-207ENST00000553837 RELBQ01201 579 aa9.99□□□□□ -0.81
SHMT2-207ENST00000553837 TNXAQ16473 311 aa9.99□□□□□ -0.81
SHMT2-207ENST00000553837 AMMECR1LQ6DCA0 310 aa9.99□□□□□ -0.81
SHMT2-207ENST00000553837 MRPL54Q6P161 138 aaKnown RBP9.99□□□□□ -0.81
SHMT2-207ENST00000553837 RNASE7Q9H1E1 156 aaKnown RBP9.99□□□□□ -0.81
SHMT2-207ENST00000553837 ARL2-SNX15V9GYD0 113 aa9.99□□□□□ -0.81
SHMT2-207ENST00000553837 RP1L1Q8IWN7 2480 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-207ENST00000553837 ANKRD11Q6UB99 2663 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-207ENST00000553837 DMXL2Q8TDJ6 3036 aa9.99□□□□□ -0.81
SHMT2-207ENST00000553837 IGLV3-9A0A075B6K5 115 aa9.99□□□□□ -0.81
SHMT2-207ENST00000553837 TRAV3A0A0B4J244 114 aa9.99□□□□□ -0.81
SHMT2-207ENST00000553837 IZUMO1RA6ND01 250 aa9.99□□□□□ -0.81
SHMT2-207ENST00000553837 USF1P22415 310 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-207ENST00000553837 TCL1AP56279 114 aa9.99□□□□□ -0.81
SHMT2-207ENST00000553837 MZT1Q08AG7 82 aa9.99□□□□□ -0.81
SHMT2-207ENST00000553837 EFNB3Q15768 340 aa9.99□□□□□ -0.81
SHMT2-207ENST00000553837 C17orf58Q2M2W7 97 aa9.99□□□□□ -0.81
SHMT2-207ENST00000553837 MPV17L2Q567V2 206 aa9.99□□□□□ -0.81
SHMT2-207ENST00000553837 EBLN2Q6P2I7 272 aa9.99□□□□□ -0.81
SHMT2-207ENST00000553837 RASL11AQ6T310 242 aa9.99□□□□□ -0.81
SHMT2-207ENST00000553837 PQLC2Q6ZP29 291 aa9.99□□□□□ -0.81
SHMT2-207ENST00000553837 WFDC8Q8IUA0 241 aa9.99□□□□□ -0.81
SHMT2-207ENST00000553837 MS4A5Q9H3V2 200 aa9.99□□□□□ -0.81
SHMT2-207ENST00000553837 ST20Q9HBF5 79 aa9.99□□□□□ -0.81
SHMT2-207ENST00000553837 PEF1Q9UBV8 284 aaKnown RBP9.99□□□□□ -0.81
SHMT2-207ENST00000553837 WASHC3Q9Y3C0 194 aa9.99□□□□□ -0.81
SHMT2-207ENST00000553837 PLCE1Q9P212 2302 aa9.98□□□□□ -0.81
SHMT2-207ENST00000553837 M0R1X1 148 aa9.98□□□□□ -0.81
SHMT2-207ENST00000553837 F2RL2O00254 374 aa9.98□□□□□ -0.81
SHMT2-207ENST00000553837 IGLC1P0CG04 106 aa9.98□□□□□ -0.81
SHMT2-207ENST00000553837 FXYD3Q14802 87 aa9.98□□□□□ -0.81
SHMT2-207ENST00000553837 TRAT1Q6PIZ9 186 aa9.98□□□□□ -0.81
SHMT2-207ENST00000553837 C12orf54Q6X4T0 127 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms