RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 RBMXL1Q96E39 390 aaKnown RBP3.33□□□□□ -1.88
RDH11-204ENST00000553578 GNPNAT1Q96EK6 184 aaPredicted RBP3.33□□□□□ -1.88
RDH11-204ENST00000553578 SCRT1Q9BWW7 348 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 MSRB1Q9NZV6 116 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 CKLFQ9UBR5 152 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 GAGE2DQ9UEU5 116 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 NAT8BQ9UHF3 227 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 BRWD1Q9NSI6 2320 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 SEC16AO15027 2179 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 IGKV1D-42A0A075B6H8 117 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 KIR2DS1A0A191URI9 304 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 BMPR1BO00238 502 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 CT62P0C5K7 136 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 MGST1P10620 155 aaKnown RBP3.33□□□□□ -1.88
RDH11-204ENST00000553578 AADACP22760 399 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 IL3RAP26951 378 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 GPR183P32249 361 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 KIR2DS1Q14954 304 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 KRTAP27-1Q3LI81 207 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 SUMO4Q6EEV6 95 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 FAM19A5Q7Z5A7 132 aaPredicted RBP3.33□□□□□ -1.88
RDH11-204ENST00000553578 OSR2Q8N2R0 312 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 SLC25A45Q8N413 288 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 OR2M3Q8NG83 312 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 SSC4DQ8WTU2 575 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 PDCD1LG2Q9BQ51 273 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 C20orf78Q9BR46 151 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 GGTLC1Q9BX51 225 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 MAP1LC3AQ9H492 121 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 BANF2Q9H503 90 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 TIMM8BQ9Y5J9 83 aaPredicted RBP3.33□□□□□ -1.88
RDH11-204ENST00000553578 DMDP11532 3685 aa3.33□□□□□ -1.88
RDH11-204ENST00000553578 WDFY3Q8IZQ1 3526 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 SRSF10O75494 262 aaKnown RBP3.32□□□□□ -1.88
RDH11-204ENST00000553578 PVRP15151 417 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 APOBEC1P41238 236 aaKnown RBP3.32□□□□□ -1.88
RDH11-204ENST00000553578 CLDN6P56747 220 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 SEC11AP67812 179 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 FAM19A2Q8N3H0 131 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 C8orf31Q8N9H6 132 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 ZIC4Q8N9L1 334 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 PHLDA1Q8WV24 401 aaPredicted RBP3.32□□□□□ -1.88
RDH11-204ENST00000553578 TAAR3PQ9P1P4 343 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 FNDC10F2Z333 226 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 J3KT08 172 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 APOMO95445 188 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 CSN3P07498 182 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 PSG2P11465 335 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 CBLN1P23435 193 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 REG1BP48304 166 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 ZNF85Q03923 595 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 MFGE8Q08431 387 aaPredicted RBP3.32□□□□□ -1.88
RDH11-204ENST00000553578 FOXF1Q12946 379 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 FAM162BQ5T6X4 162 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 DGAT2L6Q6ZPD8 337 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 TTC9CQ8N5M4 171 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 ADAT3Q96EY9 351 aaPredicted RBP3.32□□□□□ -1.88
RDH11-204ENST00000553578 DNAJC30Q96LL9 226 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 TMEM126AQ9H061 195 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 MUC3AQ02505 3323 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 EML6Q6ZMW3 1958 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 A0A1B0GTH9 108 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 CA2P00918 260 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 GPX1P07203 203 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 IL9P15248 144 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 SUB1P53999 127 aaKnown RBP eCLIP3.32□□□□□ -1.88
RDH11-204ENST00000553578 HES1Q14469 280 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 WFDC2Q14508 124 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 TMEM97Q5BJF2 176 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 SPSB3Q6PJ21 355 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 Q6ZS52 159 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 ZADH2Q8N4Q0 377 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 RBMXL3Q8N7X1 1067 aaKnown RBP3.32□□□□□ -1.88
RDH11-204ENST00000553578 OR52E2Q8NGJ4 325 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 MS4A6AQ9H2W1 248 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 TXNIPQ9H3M7 391 aa3.32□□□□□ -1.88
RDH11-204ENST00000553578 RANBP2P49792 3224 aaKnown RBP3.32□□□□□ -1.88
RDH11-204ENST00000553578 TRAV36DV7A0A075B6V5 113 aa3.31□□□□□ -1.88
RDH11-204ENST00000553578 A0A1W2PP11 408 aa3.31□□□□□ -1.88
RDH11-204ENST00000553578 A0A1W2PPM0 123 aa3.31□□□□□ -1.88
RDH11-204ENST00000553578 C9JAW5 83 aa3.31□□□□□ -1.88
RDH11-204ENST00000553578 KLF7O75840 302 aaPredicted RBP3.31□□□□□ -1.88
RDH11-204ENST00000553578 IGLV3-1P01715 115 aa3.31□□□□□ -1.88
RDH11-204ENST00000553578 HPNP05981 417 aa3.31□□□□□ -1.88
RDH11-204ENST00000553578 ZNF728P0DKX0 622 aa3.31□□□□□ -1.88
RDH11-204ENST00000553578 LINC00694P0DN24 101 aa3.31□□□□□ -1.88
RDH11-204ENST00000553578 PTGDSP41222 190 aa3.31□□□□□ -1.88
RDH11-204ENST00000553578 ZXDAP98168 799 aa3.31□□□□□ -1.88
RDH11-204ENST00000553578 TFF2Q03403 129 aa3.31□□□□□ -1.88
RDH11-204ENST00000553578 ZNF90Q03938 601 aa3.31□□□□□ -1.88
RDH11-204ENST00000553578 CDSNQ15517 529 aa3.31□□□□□ -1.88
RDH11-204ENST00000553578 VAX1Q5SQQ9 334 aa3.31□□□□□ -1.88
RDH11-204ENST00000553578 LINC01590Q5TEZ4 76 aa3.31□□□□□ -1.88
RDH11-204ENST00000553578 Q6ZUT4 128 aa3.31□□□□□ -1.88
RDH11-204ENST00000553578 C9orf40Q8IXQ3 194 aa3.31□□□□□ -1.88
RDH11-204ENST00000553578 TMEM229BQ8NBD8 167 aa3.31□□□□□ -1.88
RDH11-204ENST00000553578 OR51T1Q8NGJ9 327 aa3.31□□□□□ -1.88
RDH11-204ENST00000553578 GATAD1Q8WUU5 269 aa3.31□□□□□ -1.88
RDH11-204ENST00000553578 NAT6Q93015 286 aa3.31□□□□□ -1.88
RDH11-204ENST00000553578 ZMYND19Q96E35 227 aaPredicted RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms