RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 NPIPB3Q92617 1050 aa13.81□□□□□ -0.2
PSEN1-206ENST00000553447 KCNIP2Q9NS61 270 aa13.81□□□□□ -0.2
PSEN1-206ENST00000553447 KLK9Q9UKQ9 250 aa13.81□□□□□ -0.2
PSEN1-206ENST00000553447 IGKV1OR2-108A0A075B7D4 117 aa13.8□□□□□ -0.2
PSEN1-206ENST00000553447 IGHV3-21A0A0B4J1V1 117 aa13.8□□□□□ -0.2
PSEN1-206ENST00000553447 K7EIM0 57 aa13.8□□□□□ -0.2
PSEN1-206ENST00000553447 SOX15O60248 233 aa13.8□□□□□ -0.2
PSEN1-206ENST00000553447 HIST1H1BP16401 226 aaKnown RBP13.8□□□□□ -0.2
PSEN1-206ENST00000553447 RND2P52198 227 aa13.8□□□□□ -0.2
PSEN1-206ENST00000553447 ELLP55199 621 aaPredicted RBP13.8□□□□□ -0.2
PSEN1-206ENST00000553447 BLOC1S1P78537 153 aa13.8□□□□□ -0.2
PSEN1-206ENST00000553447 FFAR4Q5NUL3 377 aa13.8□□□□□ -0.2
PSEN1-206ENST00000553447 DPPA3Q6W0C5 159 aa13.8□□□□□ -0.2
PSEN1-206ENST00000553447 Q6ZS46 218 aa13.8□□□□□ -0.2
PSEN1-206ENST00000553447 THAP8Q8NA92 274 aa13.8□□□□□ -0.2
PSEN1-206ENST00000553447 FAM213BQ8TBF2 198 aa13.8□□□□□ -0.2
PSEN1-206ENST00000553447 OR10J1P30954 320 aa13.79□□□□□ -0.2
PSEN1-206ENST00000553447 FHITP49789 147 aa13.79□□□□□ -0.2
PSEN1-206ENST00000553447 TMEM41BQ5BJD5 291 aa13.79□□□□□ -0.2
PSEN1-206ENST00000553447 SLC7A5P1Q8MH63 180 aa13.79□□□□□ -0.2
PSEN1-206ENST00000553447 TMEM116Q8NCL8 245 aa13.79□□□□□ -0.2
PSEN1-206ENST00000553447 VSIRQ9H7M9 311 aa13.79□□□□□ -0.2
PSEN1-206ENST00000553447 THYN1Q9P016 225 aa13.79□□□□□ -0.2
PSEN1-206ENST00000553447 SLC45A2Q9UMX9 530 aa13.79□□□□□ -0.2
PSEN1-206ENST00000553447 PXMP4Q9Y6I8 212 aa13.79□□□□□ -0.2
PSEN1-206ENST00000553447 ZFHX3Q15911 3703 aa13.78□□□□□ -0.2
PSEN1-206ENST00000553447 IGKV1D-37A0A075B6S9 117 aa13.78□□□□□ -0.2
PSEN1-206ENST00000553447 AP4M1O00189 453 aa13.78□□□□□ -0.2
PSEN1-206ENST00000553447 OR2J3O76001 311 aa13.78□□□□□ -0.2
PSEN1-206ENST00000553447 NDUFB8O95169 186 aa13.78□□□□□ -0.2
PSEN1-206ENST00000553447 MBP02144 154 aa13.78□□□□□ -0.2
PSEN1-206ENST00000553447 CD99P14209 185 aa13.78□□□□□ -0.2
PSEN1-206ENST00000553447 FOSL1P15407 271 aa13.78□□□□□ -0.2
PSEN1-206ENST00000553447 RPL29P47914 159 aaKnown RBP13.78□□□□□ -0.2
PSEN1-206ENST00000553447 SCGB2A2Q13296 93 aa13.78□□□□□ -0.2
PSEN1-206ENST00000553447 PXDC1Q5TGL8 231 aa13.78□□□□□ -0.2
PSEN1-206ENST00000553447 MIC13Q5XKP0 118 aa13.78□□□□□ -0.2
PSEN1-206ENST00000553447 RBMS3Q6XE24 437 aaKnown RBP13.78□□□□□ -0.2
PSEN1-206ENST00000553447 OR4X1Q8NH49 305 aa13.78□□□□□ -0.2
PSEN1-206ENST00000553447 RPRMQ9NS64 109 aa13.78□□□□□ -0.2
PSEN1-206ENST00000553447 LINC00527Q9UJ94 153 aa13.78□□□□□ -0.2
PSEN1-206ENST00000553447 ZNF580Q9UK33 172 aa13.78□□□□□ -0.2
PSEN1-206ENST00000553447 TSPAN15O95858 294 aa13.77□□□□□ -0.21
PSEN1-206ENST00000553447 RAB2AP61019 212 aa13.77□□□□□ -0.21
PSEN1-206ENST00000553447 PRR20EP86478 221 aa13.77□□□□□ -0.21
PSEN1-206ENST00000553447 PRR20CP86479 221 aa13.77□□□□□ -0.21
PSEN1-206ENST00000553447 PRR20DP86480 221 aa13.77□□□□□ -0.21
PSEN1-206ENST00000553447 PRR20BP86481 221 aa13.77□□□□□ -0.21
PSEN1-206ENST00000553447 PRR20AP86496 221 aa13.77□□□□□ -0.21
PSEN1-206ENST00000553447 CYP2G1PQ6ZSU1 146 aa13.77□□□□□ -0.21
PSEN1-206ENST00000553447 STPG3Q8N7X2 389 aa13.77□□□□□ -0.21
PSEN1-206ENST00000553447 NPFFR1Q9GZQ6 430 aa13.77□□□□□ -0.21
PSEN1-206ENST00000553447 MED9Q9NWA0 146 aa13.77□□□□□ -0.21
PSEN1-206ENST00000553447 TRBV9A0A0B4J1U6 114 aa13.76□□□□□ -0.21
PSEN1-206ENST00000553447 TCRBV4S1A1TA0A5B7 111 aa13.76□□□□□ -0.21
PSEN1-206ENST00000553447 ZFP92A6NM28 416 aa13.76□□□□□ -0.21
PSEN1-206ENST00000553447 YIF1AO95070 293 aa13.76□□□□□ -0.21
PSEN1-206ENST00000553447 LINC00869P0C866 280 aa13.76□□□□□ -0.21
PSEN1-206ENST00000553447 B2MP61769 119 aa13.76□□□□□ -0.21
PSEN1-206ENST00000553447 ZNF616Q08AN1 781 aa13.76□□□□□ -0.21
PSEN1-206ENST00000553447 ACOT6Q3I5F7 207 aaPredicted RBP13.76□□□□□ -0.21
PSEN1-206ENST00000553447 BPIFCQ8NFQ6 507 aa13.76□□□□□ -0.21
PSEN1-206ENST00000553447 NOL4LQ96MY1 436 aaPredicted RBP13.76□□□□□ -0.21
PSEN1-206ENST00000553447 DUX5Q96PT3 197 aa13.76□□□□□ -0.21
PSEN1-206ENST00000553447 TRGV9Q99603 122 aa13.76□□□□□ -0.21
PSEN1-206ENST00000553447 PRSS22Q9GZN4 317 aa13.76□□□□□ -0.21
PSEN1-206ENST00000553447 ZNF355PQ9NSJ1 428 aa13.76□□□□□ -0.21
PSEN1-206ENST00000553447 SLC39A9Q9NUM3 307 aa13.76□□□□□ -0.21
PSEN1-206ENST00000553447 PFDN2Q9UHV9 154 aa13.76□□□□□ -0.21
PSEN1-206ENST00000553447 FBXL7Q9UJT9 491 aa13.76□□□□□ -0.21
PSEN1-206ENST00000553447 DNAJC9-AS1A6NH13 148 aa13.75□□□□□ -0.21
PSEN1-206ENST00000553447 CLN5O75503 358 aa13.75□□□□□ -0.21
PSEN1-206ENST00000553447 M6PRP20645 277 aa13.75□□□□□ -0.21
PSEN1-206ENST00000553447 RHOGP84095 191 aa13.75□□□□□ -0.21
PSEN1-206ENST00000553447 DEFA5Q01523 94 aa13.75□□□□□ -0.21
PSEN1-206ENST00000553447 COMMD7Q86VX2 200 aa13.75□□□□□ -0.21
PSEN1-206ENST00000553447 OR10G4Q8NGN3 311 aa13.75□□□□□ -0.21
PSEN1-206ENST00000553447 OR10G9Q8NGN4 311 aa13.75□□□□□ -0.21
PSEN1-206ENST00000553447 OR10G7Q8NGN6 311 aa13.75□□□□□ -0.21
PSEN1-206ENST00000553447 VN1R17PQ8TDU5 208 aa13.75□□□□□ -0.21
PSEN1-206ENST00000553447 HRH4Q9H3N8 390 aa13.75□□□□□ -0.21
PSEN1-206ENST00000553447 ZNF702PQ9H963 129 aa13.75□□□□□ -0.21
PSEN1-206ENST00000553447 CDC42EP3Q9UKI2 254 aa13.75□□□□□ -0.21
PSEN1-206ENST00000553447 MFSD2BA6NFX1 497 aa13.74□□□□□ -0.21
PSEN1-206ENST00000553447 H3BUA1 57 aa13.74□□□□□ -0.21
PSEN1-206ENST00000553447 BRI3O95415 125 aa13.74□□□□□ -0.21
PSEN1-206ENST00000553447 SRD5A1P18405 259 aa13.74□□□□□ -0.21
PSEN1-206ENST00000553447 PPIFP30405 207 aaKnown RBP13.74□□□□□ -0.21
PSEN1-206ENST00000553447 MFAP4P55083 255 aa13.74□□□□□ -0.21
PSEN1-206ENST00000553447 SELENOTP62341 195 aa13.74□□□□□ -0.21
PSEN1-206ENST00000553447 ZNF726P1Q15940 193 aa13.74□□□□□ -0.21
PSEN1-206ENST00000553447 NECAP1Q8NC96 275 aa13.74□□□□□ -0.21
PSEN1-206ENST00000553447 LYPD6BQ8NI32 183 aa13.74□□□□□ -0.21
PSEN1-206ENST00000553447 RCC1LQ96I51 464 aaKnown RBP13.74□□□□□ -0.21
PSEN1-206ENST00000553447 GSX1Q9H4S2 264 aaPredicted RBP13.74□□□□□ -0.21
PSEN1-206ENST00000553447 C21orf62Q9NYP8 219 aa13.74□□□□□ -0.21
PSEN1-206ENST00000553447 S4R3C0 116 aa13.74□□□□□ -0.21
PSEN1-206ENST00000553447 ACANP16112 2415 aa13.74□□□□□ -0.21
PSEN1-206ENST00000553447 TEX46H3BTG2 121 aa13.73□□□□□ -0.21
PSEN1-206ENST00000553447 H2AFB1P0C5Y9 115 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms