RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 MIA2Q96PC5 1412 aa2.12□□□□□ -2.07
SCFD1-209ENST00000553280 ORC5O43913 435 aa2.12□□□□□ -2.07
SCFD1-209ENST00000553280 ZNF737O75373 536 aa2.12□□□□□ -2.07
SCFD1-209ENST00000553280 HTR1AP08908 422 aa2.12□□□□□ -2.07
SCFD1-209ENST00000553280 GNG10P50151 68 aa2.12□□□□□ -2.07
SCFD1-209ENST00000553280 PIGPP57054 158 aa2.12□□□□□ -2.07
SCFD1-209ENST00000553280 DEFB128Q7Z7B8 93 aa2.12□□□□□ -2.07
SCFD1-209ENST00000553280 OR8B3Q8NGG8 313 aa2.12□□□□□ -2.07
SCFD1-209ENST00000553280 OSTCQ9NRP0 149 aa2.12□□□□□ -2.07
SCFD1-209ENST00000553280 MEIKINA0A087WXM9 373 aa2.11□□□□□ -2.07
SCFD1-209ENST00000553280 IBA57-AS1B1ANH7 110 aa2.11□□□□□ -2.07
SCFD1-209ENST00000553280 CLDN25C9JDP6 229 aa2.11□□□□□ -2.07
SCFD1-209ENST00000553280 SDCBPO00560 298 aaPredicted RBP2.11□□□□□ -2.07
SCFD1-209ENST00000553280 TCL1BO95988 128 aa2.11□□□□□ -2.07
SCFD1-209ENST00000553280 IFNA1P01562 189 aa2.11□□□□□ -2.07
SCFD1-209ENST00000553280 SHBGP04278 402 aa2.11□□□□□ -2.07
SCFD1-209ENST00000553280 COX6A1P12074 109 aa2.11□□□□□ -2.07
SCFD1-209ENST00000553280 SRIP30626 198 aa2.11□□□□□ -2.07
SCFD1-209ENST00000553280 ATP5G3P48201 142 aa2.11□□□□□ -2.07
SCFD1-209ENST00000553280 ZNF345Q14585 488 aa2.11□□□□□ -2.07
SCFD1-209ENST00000553280 KHDC3LQ587J8 217 aa2.11□□□□□ -2.07
SCFD1-209ENST00000553280 PCOTHQ58A44 107 aa2.11□□□□□ -2.07
SCFD1-209ENST00000553280 LYRM7Q5U5X0 104 aa2.11□□□□□ -2.07
SCFD1-209ENST00000553280 LCN15Q6UWW0 184 aa2.11□□□□□ -2.07
SCFD1-209ENST00000553280 C7orf65Q6ZTY9 151 aa2.11□□□□□ -2.07
SCFD1-209ENST00000553280 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
SCFD1-209ENST00000553280 CPAMD8Q8IZJ3 1885 aa2.1□□□□□ -2.07
SCFD1-209ENST00000553280 A0A0D9SG52 128 aa2.1□□□□□ -2.07
SCFD1-209ENST00000553280 PMP2P02689 132 aa2.1□□□□□ -2.07
SCFD1-209ENST00000553280 G0S2P27469 103 aa2.1□□□□□ -2.07
SCFD1-209ENST00000553280 ARHGAP11BQ3KRB8 267 aa2.1□□□□□ -2.07
SCFD1-209ENST00000553280 KRTAP13-4Q3LI77 160 aa2.1□□□□□ -2.07
SCFD1-209ENST00000553280 AAED1Q7RTV5 226 aa2.1□□□□□ -2.07
SCFD1-209ENST00000553280 C9orf163Q8N9P6 203 aa2.1□□□□□ -2.07
SCFD1-209ENST00000553280 ZNF439Q8NDP4 499 aa2.1□□□□□ -2.07
SCFD1-209ENST00000553280 OR5A1Q8NGJ0 315 aa2.1□□□□□ -2.07
SCFD1-209ENST00000553280 FAM172AQ8WUF8 416 aa2.1□□□□□ -2.07
SCFD1-209ENST00000553280 TMEM133Q9H2Q1 129 aa2.1□□□□□ -2.07
SCFD1-209ENST00000553280 CST9LQ9H4G1 147 aa2.1□□□□□ -2.07
SCFD1-209ENST00000553280 LHFPL6Q9Y693 200 aa2.1□□□□□ -2.07
SCFD1-209ENST00000553280 BAHCC1Q9P281 2608 aa2.09□□□□□ -2.07
SCFD1-209ENST00000553280 A0A087X0T9 212 aa2.09□□□□□ -2.07
SCFD1-209ENST00000553280 IGKV1-9A0A0C4DH69 117 aa2.09□□□□□ -2.07
SCFD1-209ENST00000553280 C1orf196B1AJZ1 125 aa2.09□□□□□ -2.07
SCFD1-209ENST00000553280 CYB5BO43169 146 aa2.09□□□□□ -2.07
SCFD1-209ENST00000553280 IFNA7P01567 189 aa2.09□□□□□ -2.07
SCFD1-209ENST00000553280 IFI30P13284 250 aa2.09□□□□□ -2.07
SCFD1-209ENST00000553280 SPI1P17947 270 aa2.09□□□□□ -2.07
SCFD1-209ENST00000553280 PSMD8P48556 350 aa2.09□□□□□ -2.07
SCFD1-209ENST00000553280 VBP1P61758 197 aa2.09□□□□□ -2.07
SCFD1-209ENST00000553280 NNATQ16517 81 aa2.09□□□□□ -2.07
SCFD1-209ENST00000553280 DPPA3Q6W0C5 159 aa2.09□□□□□ -2.07
SCFD1-209ENST00000553280 Q6ZRN7 208 aaPredicted RBP2.09□□□□□ -2.07
SCFD1-209ENST00000553280 STX12Q86Y82 276 aa2.09□□□□□ -2.07
SCFD1-209ENST00000553280 C10orf126Q8N4M7 172 aa2.09□□□□□ -2.07
SCFD1-209ENST00000553280 WFDC11Q8NEX6 87 aa2.09□□□□□ -2.07
SCFD1-209ENST00000553280 MBD3L1Q8WWY6 194 aa2.09□□□□□ -2.07
SCFD1-209ENST00000553280 ADAT3Q96EY9 351 aaPredicted RBP2.09□□□□□ -2.07
SCFD1-209ENST00000553280 HOPXQ9BPY8 73 aaPredicted RBP2.09□□□□□ -2.07
SCFD1-209ENST00000553280 GINS3Q9BRX5 216 aa2.09□□□□□ -2.07
SCFD1-209ENST00000553280 MIXL1Q9H2W2 232 aa2.09□□□□□ -2.07
SCFD1-209ENST00000553280 GID8Q9NWU2 228 aa2.09□□□□□ -2.07
SCFD1-209ENST00000553280 PRNDQ9UKY0 176 aa2.09□□□□□ -2.07
SCFD1-209ENST00000553280 UTP11Q9Y3A2 253 aaKnown RBP2.09□□□□□ -2.07
SCFD1-209ENST00000553280 AMMECR1Q9Y4X0 333 aaPredicted RBP2.09□□□□□ -2.07
SCFD1-209ENST00000553280 GREB1Q4ZG55 1949 aa2.09□□□□□ -2.08
SCFD1-209ENST00000553280 MED1Q15648 1581 aaPredicted RBP2.08□□□□□ -2.08
SCFD1-209ENST00000553280 OVOL1O14753 267 aa2.08□□□□□ -2.08
SCFD1-209ENST00000553280 CTSDP07339 412 aaPredicted RBP2.08□□□□□ -2.08
SCFD1-209ENST00000553280 RPSAP08865 295 aaKnown RBP2.08□□□□□ -2.08
SCFD1-209ENST00000553280 OR4E1P0C645 316 aa2.08□□□□□ -2.08
SCFD1-209ENST00000553280 CRYGAP11844 174 aa2.08□□□□□ -2.08
SCFD1-209ENST00000553280 GPX2P18283 190 aa2.08□□□□□ -2.08
SCFD1-209ENST00000553280 KRTAP12-3P60328 96 aa2.08□□□□□ -2.08
SCFD1-209ENST00000553280 NCALDP61601 193 aa2.08□□□□□ -2.08
SCFD1-209ENST00000553280 RHOBP62745 196 aa2.08□□□□□ -2.08
SCFD1-209ENST00000553280 GNG3P63215 75 aa2.08□□□□□ -2.08
SCFD1-209ENST00000553280 ELOBQ15370 118 aa2.08□□□□□ -2.08
SCFD1-209ENST00000553280 Q6ZQT0 140 aa2.08□□□□□ -2.08
SCFD1-209ENST00000553280 ZNF826PQ6ZT77 177 aa2.08□□□□□ -2.08
SCFD1-209ENST00000553280 OR4E2Q8NGC2 313 aa2.08□□□□□ -2.08
SCFD1-209ENST00000553280 OR13C6PQ8NH95 151 aa2.08□□□□□ -2.08
SCFD1-209ENST00000553280 WFDC5Q8TCV5 224 aa2.08□□□□□ -2.08
SCFD1-209ENST00000553280 NEK7Q8TDX7 302 aa2.08□□□□□ -2.08
SCFD1-209ENST00000553280 HIST1H2BLQ99880 126 aa2.08□□□□□ -2.08
SCFD1-209ENST00000553280 YIPF3Q9GZM5 350 aa2.08□□□□□ -2.08
SCFD1-209ENST00000553280 IMUPQ9GZP8 106 aa2.08□□□□□ -2.08
SCFD1-209ENST00000553280 EPDR1Q9UM22 224 aa2.08□□□□□ -2.08
SCFD1-209ENST00000553280 ROCK1Q13464 1354 aa2.08□□□□□ -2.08
SCFD1-209ENST00000553280 TONSLQ96HA7 1378 aa2.08□□□□□ -2.08
SCFD1-209ENST00000553280 NCKAP5O14513 1909 aa2.07□□□□□ -2.08
SCFD1-209ENST00000553280 GLI3P10071 1580 aa2.07□□□□□ -2.08
SCFD1-209ENST00000553280 MPDZO75970 2070 aa2.07□□□□□ -2.08
SCFD1-209ENST00000553280 TMEM212A6NML5 194 aa2.07□□□□□ -2.08
SCFD1-209ENST00000553280 G3V2T6 193 aa2.07□□□□□ -2.08
SCFD1-209ENST00000553280 KRTAP12-1P59990 96 aa2.07□□□□□ -2.08
SCFD1-209ENST00000553280 RHEBQ15382 184 aa2.07□□□□□ -2.08
SCFD1-209ENST00000553280 COA5Q86WW8 74 aa2.07□□□□□ -2.08
SCFD1-209ENST00000553280 OR4D11Q8NGI4 311 aa2.07□□□□□ -2.08
SCFD1-209ENST00000553280 OR8D4Q8NGM9 314 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms