RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 TMEM116Q8NCL8 245 aa10.01□□□□□ -0.81
CACNB3-223ENST00000552480 BPIFCQ8NFQ6 507 aa10.01□□□□□ -0.81
CACNB3-223ENST00000552480 FAM110DQ8TAY7 271 aaPredicted RBP10.01□□□□□ -0.81
CACNB3-223ENST00000552480 TMEM68Q96MH6 324 aa10.01□□□□□ -0.81
CACNB3-223ENST00000552480 PBDC1Q9BVG4 233 aa10.01□□□□□ -0.81
CACNB3-223ENST00000552480 MAP1LC3BQ9GZQ8 125 aa10.01□□□□□ -0.81
CACNB3-223ENST00000552480 SLC25A22Q9H936 323 aa10.01□□□□□ -0.81
CACNB3-223ENST00000552480 MRPL36Q9P0J6 103 aaKnown RBP10.01□□□□□ -0.81
CACNB3-223ENST00000552480 SPG11Q96JI7 2443 aa10.01□□□□□ -0.81
CACNB3-223ENST00000552480 IGLV11-55A0A075B6I3 123 aa10□□□□□ -0.81
CACNB3-223ENST00000552480 IGKV1D-37A0A075B6S9 117 aa10□□□□□ -0.81
CACNB3-223ENST00000552480 TCRBV4S1A1TA0A5B7 111 aa10□□□□□ -0.81
CACNB3-223ENST00000552480 SMAD7O15105 426 aaKnown RBP10□□□□□ -0.81
CACNB3-223ENST00000552480 AMY1AP04745 511 aa10□□□□□ -0.81
CACNB3-223ENST00000552480 CD5P06127 495 aa10□□□□□ -0.81
CACNB3-223ENST00000552480 CRIP2P52943 208 aaPredicted RBP10□□□□□ -0.81
CACNB3-223ENST00000552480 SELENOTP62341 195 aa10□□□□□ -0.81
CACNB3-223ENST00000552480 CCL20P78556 96 aa10□□□□□ -0.81
CACNB3-223ENST00000552480 SRSF3P84103 164 aaKnown RBP10□□□□□ -0.81
CACNB3-223ENST00000552480 GUK1Q16774 197 aa10□□□□□ -0.81
CACNB3-223ENST00000552480 GCSAMLQ5JQS6 135 aa10□□□□□ -0.81
CACNB3-223ENST00000552480 RAB24Q969Q5 203 aa10□□□□□ -0.81
CACNB3-223ENST00000552480 LINC00052Q96N35 136 aa10□□□□□ -0.81
CACNB3-223ENST00000552480 TRGV9Q99603 122 aa10□□□□□ -0.81
CACNB3-223ENST00000552480 TREM1Q9NP99 234 aa10□□□□□ -0.81
CACNB3-223ENST00000552480 WNK2Q9Y3S1 2297 aa10□□□□□ -0.81
CACNB3-223ENST00000552480 CRYBG3Q68DQ2 2970 aa9.99□□□□□ -0.81
CACNB3-223ENST00000552480 HELZ2Q9BYK8 2649 aaKnown RBP9.99□□□□□ -0.81
CACNB3-223ENST00000552480 IGHV3-21A0A0B4J1V1 117 aa9.99□□□□□ -0.81
CACNB3-223ENST00000552480 SH2D7A6NKC9 451 aaPredicted RBP9.99□□□□□ -0.81
CACNB3-223ENST00000552480 ZFP92A6NM28 416 aa9.99□□□□□ -0.81
CACNB3-223ENST00000552480 K7EIM0 57 aa9.99□□□□□ -0.81
CACNB3-223ENST00000552480 IGHV3-48P01763 117 aa9.99□□□□□ -0.81
CACNB3-223ENST00000552480 HIST1H1BP16401 226 aaKnown RBP9.99□□□□□ -0.81
CACNB3-223ENST00000552480 PEA15Q15121 130 aa9.99□□□□□ -0.81
CACNB3-223ENST00000552480 KLK9Q2XQG4 91 aa9.99□□□□□ -0.81
CACNB3-223ENST00000552480 UNQ5815/PRO19632Q6UWF5 114 aa9.99□□□□□ -0.81
CACNB3-223ENST00000552480 OR4X1Q8NH49 305 aa9.99□□□□□ -0.81
CACNB3-223ENST00000552480 OR5R1Q8NH85 324 aa9.99□□□□□ -0.81
CACNB3-223ENST00000552480 FANCD2OSQ96PS1 177 aa9.99□□□□□ -0.81
CACNB3-223ENST00000552480 SCRT1Q9BWW7 348 aa9.99□□□□□ -0.81
CACNB3-223ENST00000552480 TMEM231Q9H6L2 316 aa9.99□□□□□ -0.81
CACNB3-223ENST00000552480 KLK9Q9UKQ9 250 aa9.99□□□□□ -0.81
CACNB3-223ENST00000552480 PRRC2AP48634 2157 aaKnown RBP9.99□□□□□ -0.81
CACNB3-223ENST00000552480 ASH1LQ9NR48 2969 aaKnown RBP9.99□□□□□ -0.81
CACNB3-223ENST00000552480 MED13LQ71F56 2210 aa9.98□□□□□ -0.81
CACNB3-223ENST00000552480 A0A1W2PPV4 95 aa9.98□□□□□ -0.81
CACNB3-223ENST00000552480 RBFOX3A6NFN3 312 aa9.98□□□□□ -0.81
CACNB3-223ENST00000552480 IER3P46695 156 aa9.98□□□□□ -0.81
CACNB3-223ENST00000552480 FGF8P55075 233 aaPredicted RBP9.98□□□□□ -0.81
CACNB3-223ENST00000552480 RHOBP62745 196 aa9.98□□□□□ -0.81
CACNB3-223ENST00000552480 PMS2P11Q13670 270 aa9.98□□□□□ -0.81
CACNB3-223ENST00000552480 ECSCRQ19T08 205 aa9.98□□□□□ -0.81
CACNB3-223ENST00000552480 AKIRIN2Q53H80 203 aa9.98□□□□□ -0.81
CACNB3-223ENST00000552480 OR5T1Q8NG75 326 aa9.98□□□□□ -0.81
CACNB3-223ENST00000552480 NARS2Q96I59 477 aaKnown RBP9.98□□□□□ -0.81
CACNB3-223ENST00000552480 TMUB1Q9BVT8 246 aa9.98□□□□□ -0.81
CACNB3-223ENST00000552480 C19orf24Q9BVV8 132 aa9.98□□□□□ -0.81
CACNB3-223ENST00000552480 EIF5A2Q9GZV4 153 aaKnown RBP9.98□□□□□ -0.81
CACNB3-223ENST00000552480 SMDT1Q9H4I9 107 aa9.98□□□□□ -0.81
CACNB3-223ENST00000552480 PRDM13Q9H4Q3 707 aa9.98□□□□□ -0.81
CACNB3-223ENST00000552480 TNFRSF19Q9NS68 423 aa9.98□□□□□ -0.81
CACNB3-223ENST00000552480 THYN1Q9P016 225 aa9.98□□□□□ -0.81
CACNB3-223ENST00000552480 PTPN13Q12923 2485 aa9.98□□□□□ -0.81
CACNB3-223ENST00000552480 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.98□□□□□ -0.81
CACNB3-223ENST00000552480 TMEM218A2RU14 115 aa9.97□□□□□ -0.81
CACNB3-223ENST00000552480 LINC01548A6NM66 108 aa9.97□□□□□ -0.81
CACNB3-223ENST00000552480 CD5LO43866 347 aa9.97□□□□□ -0.81
CACNB3-223ENST00000552480 CLN5O75503 358 aa9.97□□□□□ -0.81
CACNB3-223ENST00000552480 IFNA1P01562 189 aa9.97□□□□□ -0.81
CACNB3-223ENST00000552480 IGHV4-59P01825 116 aa9.97□□□□□ -0.81
CACNB3-223ENST00000552480 IGHG2P01859 326 aa9.97□□□□□ -0.81
CACNB3-223ENST00000552480 GATA2P23769 480 aaPredicted RBP9.97□□□□□ -0.81
CACNB3-223ENST00000552480 C19orf54Q5BKX5 351 aa9.97□□□□□ -0.81
CACNB3-223ENST00000552480 C9orf152Q5JTZ5 239 aa9.97□□□□□ -0.81
CACNB3-223ENST00000552480 ZNF506Q5JVG8 444 aa9.97□□□□□ -0.81
CACNB3-223ENST00000552480 Q6YL49 198 aa9.97□□□□□ -0.81
CACNB3-223ENST00000552480 ZNF48Q96MX3 618 aaPredicted RBP9.97□□□□□ -0.81
CACNB3-223ENST00000552480 RNF2Q99496 336 aa9.97□□□□□ -0.81
CACNB3-223ENST00000552480 TACC2O95359 2948 aa9.97□□□□□ -0.81
CACNB3-223ENST00000552480 CELSR2Q9HCU4 2923 aa9.97□□□□□ -0.81
CACNB3-223ENST00000552480 MAST4O15021 2626 aa9.96□□□□□ -0.81
CACNB3-223ENST00000552480 TRAV41A0A0B4J266 112 aa9.96□□□□□ -0.82
CACNB3-223ENST00000552480 LOC102723971A0A1B0GUV8 181 aa9.96□□□□□ -0.82
CACNB3-223ENST00000552480 HMGB3O15347 200 aaKnown RBP9.96□□□□□ -0.82
CACNB3-223ENST00000552480 EIF3GO75821 320 aaKnown RBP eCLIP9.96□□□□□ -0.82
CACNB3-223ENST00000552480 IGF1P05019 195 aa9.96□□□□□ -0.82
CACNB3-223ENST00000552480 OR5G3P0C626 314 aa9.96□□□□□ -0.82
CACNB3-223ENST00000552480 IGLC1P0CG04 106 aa9.96□□□□□ -0.82
CACNB3-223ENST00000552480 STAG3L2P0CL84 134 aa9.96□□□□□ -0.82
CACNB3-223ENST00000552480 STAG3L3P0CL85 134 aa9.96□□□□□ -0.82
CACNB3-223ENST00000552480 ZNF90Q03938 601 aa9.96□□□□□ -0.82
CACNB3-223ENST00000552480 SLC35E3Q7Z769 313 aa9.96□□□□□ -0.82
CACNB3-223ENST00000552480 OR1L4Q8NGR5 311 aa9.96□□□□□ -0.82
CACNB3-223ENST00000552480 GNG13Q9P2W3 67 aa9.96□□□□□ -0.82
CACNB3-223ENST00000552480 FUT9Q9Y231 359 aa9.96□□□□□ -0.82
CACNB3-223ENST00000552480 APCP25054 2843 aa9.96□□□□□ -0.82
CACNB3-223ENST00000552480 VPS13CQ709C8 3753 aa9.95□□□□□ -0.82
CACNB3-223ENST00000552480 TRAV30A0A087WSZ9 112 aa9.95□□□□□ -0.82
CACNB3-223ENST00000552480 TRBV9A0A0B4J1U6 114 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms