RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	MCRIP2	Q9BUT9	160 aa	Known RBP	5.09	□□□□□ -1.59
CNOT2-238	ENST00000552422	HINT2	Q9BX68	163 aa		5.09	□□□□□ -1.59
CNOT2-238	ENST00000552422	WDR12	Q9GZL7	423 aa	Known RBP	5.09	□□□□□ -1.59
CNOT2-238	ENST00000552422	PLEKHA3	Q9HB20	300 aa		5.09	□□□□□ -1.59
CNOT2-238	ENST00000552422	RANGRF	Q9HD47	186 aa	Predicted RBP	5.09	□□□□□ -1.59
CNOT2-238	ENST00000552422	CACNG5	Q9UF02	275 aa		5.09	□□□□□ -1.59
CNOT2-238	ENST00000552422	SHPK	Q9UHJ6	478 aa		5.09	□□□□□ -1.59
CNOT2-238	ENST00000552422	F11R	Q9Y624	299 aa	Known RBP	5.09	□□□□□ -1.59
CNOT2-238	ENST00000552422	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	DUXB	A0A1W2PPF3	345 aa		5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	MFSD2B	A6NFX1	497 aa		5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	CYB5B	O43169	146 aa		5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	UPK1B	O75841	260 aa		5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	IFNA17	P01571	189 aa		5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	HLA-A	P01891	365 aa	Known RBP	5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	ZP3	P21754	424 aa		5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	EGFEM1P	Q0D2K5	195 aa		5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	DHRS2	Q13268	280 aa		5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	ASAH1	Q13510	395 aa		5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	ZNF846	Q147U1	533 aa		5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	ANKRD55	Q3KP44	614 aa		5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	LYZL2	Q7Z4W2	148 aa		5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	LGI3	Q8N145	548 aa		5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	OR2C3	Q8N628	320 aa		5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	OR1L6	Q8NGR2	347 aa		5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	OR1P1	Q8NH06	330 aa		5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	OR52E5	Q8NH55	327 aa		5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	DCUN1D4	Q92564	292 aa		5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	DLX4	Q92988	240 aa	Predicted RBP	5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	CXorf58	Q96LI9	332 aa		5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	PDCD10	Q9BUL8	212 aa		5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	GPR61	Q9BZJ8	451 aa		5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	C20orf85	Q9H1P6	137 aa		5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	THYN1	Q9P016	225 aa		5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	PEF1	Q9UBV8	284 aa	Known RBP	5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	CACFD1	Q9UGQ2	172 aa		5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	TBC1D24	Q9ULP9	559 aa		5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	FLVCR2	Q9UPI3	526 aa		5.08	□□□□□ -1.6
CNOT2-238	ENST00000552422	TRBV7-1	A0A0A6YYK4	115 aa		5.07	□□□□□ -1.6
CNOT2-238	ENST00000552422	C9orf170	A2RU37	121 aa		5.07	□□□□□ -1.6
CNOT2-238	ENST00000552422	SEC14L6	B5MCN3	397 aa		5.07	□□□□□ -1.6
CNOT2-238	ENST00000552422	PPP5D1	E7EU14	171 aa		5.07	□□□□□ -1.6
CNOT2-238	ENST00000552422		K7EIM0	57 aa		5.07	□□□□□ -1.6
CNOT2-238	ENST00000552422	BMPR1B	O00238	502 aa		5.07	□□□□□ -1.6
CNOT2-238	ENST00000552422	OVOL1	O14753	267 aa		5.07	□□□□□ -1.6
CNOT2-238	ENST00000552422	NDUFB8	O95169	186 aa		5.07	□□□□□ -1.6
CNOT2-238	ENST00000552422	SFT2D2	O95562	160 aa		5.07	□□□□□ -1.6
CNOT2-238	ENST00000552422	TCRB	P04435	133 aa		5.07	□□□□□ -1.6
CNOT2-238	ENST00000552422	OR4E1	P0C645	316 aa		5.07	□□□□□ -1.6
CNOT2-238	ENST00000552422	SULT1A3	P0DMM9	295 aa		5.07	□□□□□ -1.6
CNOT2-238	ENST00000552422	SULT1A4	P0DMN0	295 aa		5.07	□□□□□ -1.6
CNOT2-238	ENST00000552422	ANXA7	P20073	488 aa	Known RBP	5.07	□□□□□ -1.6
CNOT2-238	ENST00000552422	HOXA1	P49639	335 aa	Predicted RBP	5.07	□□□□□ -1.6
CNOT2-238	ENST00000552422	SPCS3	P61009	180 aa		5.07	□□□□□ -1.6
CNOT2-238	ENST00000552422	TNFRSF9	Q07011	255 aa		5.07	□□□□□ -1.6
CNOT2-238	ENST00000552422	KLF5	Q13887	457 aa	Predicted RBP	5.07	□□□□□ -1.6
CNOT2-238	ENST00000552422	SMCO1	Q147U7	214 aa		5.07	□□□□□ -1.6
CNOT2-238	ENST00000552422	BSX	Q3C1V8	233 aa		5.07	□□□□□ -1.6
CNOT2-238	ENST00000552422	SPINK9	Q5DT21	86 aa		5.07	□□□□□ -1.6
CNOT2-238	ENST00000552422	PVRIG	Q6DKI7	326 aa		5.07	□□□□□ -1.6
CNOT2-238	ENST00000552422	LYG2	Q86SG7	212 aa		5.07	□□□□□ -1.6
CNOT2-238	ENST00000552422	ZNF502	Q8TBZ5	544 aa		5.07	□□□□□ -1.6
CNOT2-238	ENST00000552422	VN1R17P	Q8TDU5	208 aa		5.07	□□□□□ -1.6
CNOT2-238	ENST00000552422	EEF1AKMT3	Q96AZ1	226 aa		5.07	□□□□□ -1.6
CNOT2-238	ENST00000552422	GPR146	Q96CH1	333 aa		5.07	□□□□□ -1.6
CNOT2-238	ENST00000552422	NUDT15	Q9NV35	164 aa		5.07	□□□□□ -1.6
CNOT2-238	ENST00000552422	TMED3	Q9Y3Q3	217 aa		5.07	□□□□□ -1.6
CNOT2-238	ENST00000552422	DNAH9	Q9NYC9	4486 aa		5.06	□□□□□ -1.6
CNOT2-238	ENST00000552422		A0A1B0GU03	582 aa		5.06	□□□□□ -1.6
CNOT2-238	ENST00000552422	PITX3	O75364	302 aa		5.06	□□□□□ -1.6
CNOT2-238	ENST00000552422	IGHV3-23	P01764	117 aa		5.06	□□□□□ -1.6
CNOT2-238	ENST00000552422	RNASE2	P10153	161 aa	Known RBP	5.06	□□□□□ -1.6
CNOT2-238	ENST00000552422	SLC25A6	P12236	298 aa		5.06	□□□□□ -1.6
CNOT2-238	ENST00000552422	FCGR2B	P31994	310 aa	Predicted RBP	5.06	□□□□□ -1.6
CNOT2-238	ENST00000552422	ARL3	P36405	182 aa		5.06	□□□□□ -1.6
CNOT2-238	ENST00000552422	SNCA	P37840	140 aa		5.06	□□□□□ -1.6
CNOT2-238	ENST00000552422	INSL3	P51460	131 aa		5.06	□□□□□ -1.6
CNOT2-238	ENST00000552422	SYNJ2BP	P57105	145 aa		5.06	□□□□□ -1.6
CNOT2-238	ENST00000552422	ERH	P84090	104 aa	Known RBP	5.06	□□□□□ -1.6
CNOT2-238	ENST00000552422	DEFA6	Q01524	100 aa		5.06	□□□□□ -1.6
CNOT2-238	ENST00000552422	IFITM3	Q01628	133 aa		5.06	□□□□□ -1.6
CNOT2-238	ENST00000552422	RPEL1	Q2QD12	228 aa		5.06	□□□□□ -1.6
CNOT2-238	ENST00000552422	C4orf46	Q504U0	113 aa		5.06	□□□□□ -1.6
CNOT2-238	ENST00000552422	C9orf66	Q5T8R8	295 aa		5.06	□□□□□ -1.6
CNOT2-238	ENST00000552422	SLC25A24	Q6NUK1	477 aa		5.06	□□□□□ -1.6
CNOT2-238	ENST00000552422	MZT2B	Q6NZ67	158 aa		5.06	□□□□□ -1.6
CNOT2-238	ENST00000552422	ACSM6	Q6P461	480 aa		5.06	□□□□□ -1.6
CNOT2-238	ENST00000552422	CLEC19A	Q6UXS0	136 aa		5.06	□□□□□ -1.6
CNOT2-238	ENST00000552422	SCARB1	Q8WTV0	552 aa		5.06	□□□□□ -1.6
CNOT2-238	ENST00000552422	ATP6V0B	Q99437	205 aa		5.06	□□□□□ -1.6
CNOT2-238	ENST00000552422	HSPB7	Q9UBY9	170 aa		5.06	□□□□□ -1.6
CNOT2-238	ENST00000552422		S4R3C0	116 aa		5.06	□□□□□ -1.6
CNOT2-238	ENST00000552422	STAB2	Q8WWQ8	2551 aa		5.05	□□□□□ -1.6
CNOT2-238	ENST00000552422	TRAV6	A0A075B6T7	132 aa		5.05	□□□□□ -1.6
CNOT2-238	ENST00000552422	FAM240B	A0A1B0GVZ2	78 aa		5.05	□□□□□ -1.6
CNOT2-238	ENST00000552422	CEBPZOS	A8MTT3	80 aa		5.05	□□□□□ -1.6
CNOT2-238	ENST00000552422		A8MWP6	167 aa		5.05	□□□□□ -1.6
CNOT2-238	ENST00000552422	FAM90A26	D6RGX4	464 aa		5.05	□□□□□ -1.6
CNOT2-238	ENST00000552422		I3L2K1	104 aa		5.05	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms