RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 HEATR1Q9H583 2144 aaKnown RBP3.53□□□□□ -1.84
CCDC59-204ENST00000550589 ZNF430Q9H8G1 570 aaPredicted RBP3.53□□□□□ -1.84
CCDC59-204ENST00000550589 DMRT1Q9Y5R6 373 aa3.53□□□□□ -1.84
CCDC59-204ENST00000550589 TRAPPC1Q9Y5R8 145 aa3.53□□□□□ -1.84
CCDC59-204ENST00000550589 CNOT1A5YKK6 2376 aaKnown RBP3.53□□□□□ -1.84
CCDC59-204ENST00000550589 PPIAL4CA0A0B4J2A2 164 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.52□□□□□ -1.85
CCDC59-204ENST00000550589 TCRBV4S1A1TA0A5B7 111 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 XKRY2A2RUG3 117 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 SRRM4A7MD48 611 aaKnown RBP3.52□□□□□ -1.85
CCDC59-204ENST00000550589 E7EQL1 145 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 TNFRSF13BO14836 293 aaPredicted RBP3.52□□□□□ -1.85
CCDC59-204ENST00000550589 MMP23AO75900 390 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 GCGP01275 180 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 LIPFP07098 398 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 PPIAL4GP0DN37 164 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 RNASE2P10153 161 aaKnown RBP3.52□□□□□ -1.85
CCDC59-204ENST00000550589 FABP4P15090 132 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 CCL3L1P16619 93 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 SUMO1P63165 101 aaKnown RBP3.52□□□□□ -1.85
CCDC59-204ENST00000550589 PLGLAQ15195 96 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 GCSAMLQ5JQS6 135 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 COA6Q5JTJ3 125 aaKnown RBP3.52□□□□□ -1.85
CCDC59-204ENST00000550589 C10orf113Q5VZT2 155 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 OR10D4PQ8NGN7 298 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 OR4X1Q8NH49 305 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 NEU4Q8WWR8 484 aaPredicted RBP3.52□□□□□ -1.85
CCDC59-204ENST00000550589 SMIM12Q96EX1 92 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 PERPQ96FX8 193 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 PACRGQ96M98 296 aaPredicted RBP3.52□□□□□ -1.85
CCDC59-204ENST00000550589 SLC25A33Q9BSK2 321 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 CLEC7AQ9BXN2 247 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 GTF3C1Q12789 2109 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 ZNF318Q5VUA4 2279 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 CCL21O00585 134 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 OR10J4P0C629 311 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 LINC00869P0C866 280 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 LOXP28300 417 aaPredicted RBP3.52□□□□□ -1.85
CCDC59-204ENST00000550589 RPL27AP46776 148 aaKnown RBP3.52□□□□□ -1.85
CCDC59-204ENST00000550589 REG1BP48304 166 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 PDLIM4P50479 330 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 RANP62826 216 aaKnown RBP3.52□□□□□ -1.85
CCDC59-204ENST00000550589 UBE2L3P68036 154 aaKnown RBP3.52□□□□□ -1.85
CCDC59-204ENST00000550589 RPEL1Q2QD12 228 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 ZNF672Q499Z4 452 aaPredicted RBP3.52□□□□□ -1.85
CCDC59-204ENST00000550589 ACTL10Q5JWF8 245 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 CCDC144NLQ6NUI1 221 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 TEX38Q6PEX7 206 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 DUX4L9Q6RFH8 374 aaPredicted RBP3.52□□□□□ -1.85
CCDC59-204ENST00000550589 HIST3H2BBQ8N257 126 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 ZCCHC24Q8N2G6 241 aaKnown RBP3.52□□□□□ -1.85
CCDC59-204ENST00000550589 ZNF114Q8NC26 417 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 OR1P1Q8NH06 330 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 TMEM37Q8WXS4 190 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 ST6GALNAC6Q969X2 333 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 GSN-AS1Q9NRJ2 163 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 OSTCQ9NRP0 149 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 IL36BQ9NZH7 164 aa3.52□□□□□ -1.85
CCDC59-204ENST00000550589 USF3Q68DE3 2245 aa3.51□□□□□ -1.85
CCDC59-204ENST00000550589 SVILO95425 2214 aa3.51□□□□□ -1.85
CCDC59-204ENST00000550589 IGHV2-26A0A0B4J1V2 119 aa3.51□□□□□ -1.85
CCDC59-204ENST00000550589 BUB1B-PAK6H3BSN5 160 aa3.51□□□□□ -1.85
CCDC59-204ENST00000550589 ISLRO14498 428 aa3.51□□□□□ -1.85
CCDC59-204ENST00000550589 SLC25A17O43808 307 aa3.51□□□□□ -1.85
CCDC59-204ENST00000550589 DEFA4P12838 97 aa3.51□□□□□ -1.85
CCDC59-204ENST00000550589 HIST1H1BP16401 226 aaKnown RBP3.51□□□□□ -1.85
CCDC59-204ENST00000550589 GPR6P46095 362 aaPredicted RBP3.51□□□□□ -1.85
CCDC59-204ENST00000550589 YPEL3P61236 119 aaPredicted RBP3.51□□□□□ -1.85
CCDC59-204ENST00000550589 UBE2G1P62253 170 aa3.51□□□□□ -1.85
CCDC59-204ENST00000550589 PAFAH1B2P68402 229 aa3.51□□□□□ -1.85
CCDC59-204ENST00000550589 TNXAQ16473 311 aa3.51□□□□□ -1.85
CCDC59-204ENST00000550589 IQCJQ1A5X6 159 aa3.51□□□□□ -1.85
CCDC59-204ENST00000550589 RASL11AQ6T310 242 aa3.51□□□□□ -1.85
CCDC59-204ENST00000550589 MIR17HGQ75NE6 70 aa3.51□□□□□ -1.85
CCDC59-204ENST00000550589 MOB3BQ86TA1 216 aa3.51□□□□□ -1.85
CCDC59-204ENST00000550589 PPP1R27Q86WC6 154 aa3.51□□□□□ -1.85
CCDC59-204ENST00000550589 OR5R1Q8NH85 324 aa3.51□□□□□ -1.85
CCDC59-204ENST00000550589 OCC1Q8TAD7 63 aa3.51□□□□□ -1.85
CCDC59-204ENST00000550589 C8orf46Q8TAG6 207 aa3.51□□□□□ -1.85
CCDC59-204ENST00000550589 TRGV9Q99603 122 aa3.51□□□□□ -1.85
CCDC59-204ENST00000550589 PAXXQ9BUH6 204 aa3.51□□□□□ -1.85
CCDC59-204ENST00000550589 GPR61Q9BZJ8 451 aa3.51□□□□□ -1.85
CCDC59-204ENST00000550589 TNFRSF19Q9NS68 423 aa3.51□□□□□ -1.85
CCDC59-204ENST00000550589 CBLN4Q9NTU7 201 aa3.51□□□□□ -1.85
CCDC59-204ENST00000550589 CDC42EP3Q9UKI2 254 aa3.51□□□□□ -1.85
CCDC59-204ENST00000550589 PTPRBP23467 1997 aa3.51□□□□□ -1.85
CCDC59-204ENST00000550589 TRAV30A0A087WSZ9 112 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 IGHV1-3A0A0C4DH29 117 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 M0R1W7 72 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 CNIH1O95406 144 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 SOD3P08294 240 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 HIST1H1EP10412 219 aaKnown RBP3.5□□□□□ -1.85
CCDC59-204ENST00000550589 NPPCP23582 126 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 CRYBB3P26998 211 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 HTR1DP28221 377 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 DLX6P56179 175 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 PKIAP61925 76 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 DEFA6Q01524 100 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 PAX2Q02962 417 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 PRSS8Q16651 343 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms