RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 INS-IGF2F8WCM5 200 aa8.32□□□□□ -1.08
SMARCD1-208ENST00000550280 IGKV1-17P01599 117 aa8.32□□□□□ -1.08
SMARCD1-208ENST00000550280 CD5P06127 495 aa8.32□□□□□ -1.08
SMARCD1-208ENST00000550280 MIFP14174 115 aa8.32□□□□□ -1.08
SMARCD1-208ENST00000550280 CRYBB3P26998 211 aa8.32□□□□□ -1.08
SMARCD1-208ENST00000550280 NEDD8Q15843 81 aa8.32□□□□□ -1.08
SMARCD1-208ENST00000550280 LINC00336Q6ZUF6 198 aa8.32□□□□□ -1.08
SMARCD1-208ENST00000550280 DUSP18Q8NEJ0 188 aa8.32□□□□□ -1.08
SMARCD1-208ENST00000550280 STXBP6Q8NFX7 210 aa8.32□□□□□ -1.08
SMARCD1-208ENST00000550280 GRAMD2BQ96HH9 432 aa8.32□□□□□ -1.08
SMARCD1-208ENST00000550280 RNF126Q9BV68 326 aa8.32□□□□□ -1.08
SMARCD1-208ENST00000550280 YTHDF1Q9BYJ9 559 aaKnown RBP8.32□□□□□ -1.08
SMARCD1-208ENST00000550280 U3KQE9 123 aa8.32□□□□□ -1.08
SMARCD1-208ENST00000550280 AMBPP02760 352 aa8.31□□□□□ -1.08
SMARCD1-208ENST00000550280 SPP1P10451 314 aa8.31□□□□□ -1.08
SMARCD1-208ENST00000550280 PI3P19957 117 aa8.31□□□□□ -1.08
SMARCD1-208ENST00000550280 PRSS3P35030 304 aa8.31□□□□□ -1.08
SMARCD1-208ENST00000550280 P2RY1P47900 373 aa8.31□□□□□ -1.08
SMARCD1-208ENST00000550280 NPBWR1P48145 328 aa8.31□□□□□ -1.08
SMARCD1-208ENST00000550280 UCP3P55916 312 aa8.31□□□□□ -1.08
SMARCD1-208ENST00000550280 RPL11P62913 178 aaKnown RBP8.31□□□□□ -1.08
SMARCD1-208ENST00000550280 BSXQ3C1V8 233 aa8.31□□□□□ -1.08
SMARCD1-208ENST00000550280 TP53RKQ96S44 253 aa8.31□□□□□ -1.08
SMARCD1-208ENST00000550280 M0QYG6 137 aa8.3□□□□□ -1.08
SMARCD1-208ENST00000550280 TMEM127O75204 238 aa8.3□□□□□ -1.08
SMARCD1-208ENST00000550280 CLN5O75503 358 aa8.3□□□□□ -1.08
SMARCD1-208ENST00000550280 NPPCP23582 126 aa8.3□□□□□ -1.08
SMARCD1-208ENST00000550280 ERHP84090 104 aaKnown RBP8.3□□□□□ -1.08
SMARCD1-208ENST00000550280 ACTL10Q5JWF8 245 aa8.3□□□□□ -1.08
SMARCD1-208ENST00000550280 MORN3Q6PF18 240 aaPredicted RBP8.3□□□□□ -1.08
SMARCD1-208ENST00000550280 Q6ZRM9 215 aa8.3□□□□□ -1.08
SMARCD1-208ENST00000550280 DEFB131BA0A096LNP1 70 aa8.29□□□□□ -1.08
SMARCD1-208ENST00000550280 M0R2N4 97 aa8.29□□□□□ -1.08
SMARCD1-208ENST00000550280 MED14OSP0DP75 135 aa8.29□□□□□ -1.08
SMARCD1-208ENST00000550280 ETV6P41212 452 aa8.29□□□□□ -1.08
SMARCD1-208ENST00000550280 RND3P61587 244 aa8.29□□□□□ -1.08
SMARCD1-208ENST00000550280 TSPAN5P62079 268 aa8.29□□□□□ -1.08
SMARCD1-208ENST00000550280 LSM3P62310 102 aaKnown RBP8.29□□□□□ -1.08
SMARCD1-208ENST00000550280 TIGITQ495A1 244 aa8.29□□□□□ -1.08
SMARCD1-208ENST00000550280 TMEM41BQ5BJD5 291 aa8.29□□□□□ -1.08
SMARCD1-208ENST00000550280 LHFPL1Q86WI0 220 aa8.29□□□□□ -1.08
SMARCD1-208ENST00000550280 POM121L12Q8N7R1 296 aa8.29□□□□□ -1.08
SMARCD1-208ENST00000550280 OR4X1Q8NH49 305 aa8.29□□□□□ -1.08
SMARCD1-208ENST00000550280 TMEM170AQ8WVE7 144 aa8.29□□□□□ -1.08
SMARCD1-208ENST00000550280 GLMPQ8WWB7 406 aa8.29□□□□□ -1.08
SMARCD1-208ENST00000550280 YIPF6Q96EC8 236 aa8.29□□□□□ -1.08
SMARCD1-208ENST00000550280 RAB40CQ96S21 281 aa8.29□□□□□ -1.08
SMARCD1-208ENST00000550280 TBC1D24Q9ULP9 559 aa8.29□□□□□ -1.08
SMARCD1-208ENST00000550280 PRSS29PA6NIE9 313 aa8.28□□□□□ -1.08
SMARCD1-208ENST00000550280 NXPH3O95157 252 aa8.28□□□□□ -1.08
SMARCD1-208ENST00000550280 ATP6V1G2O95670 118 aa8.28□□□□□ -1.08
SMARCD1-208ENST00000550280 DEFB1P60022 68 aa8.28□□□□□ -1.08
SMARCD1-208ENST00000550280 LPCAT3Q6P1A2 487 aa8.28□□□□□ -1.08
SMARCD1-208ENST00000550280 C16orf54Q6UWD8 224 aa8.28□□□□□ -1.08
SMARCD1-208ENST00000550280 SNX29P2Q8IUI4 249 aa8.28□□□□□ -1.08
SMARCD1-208ENST00000550280 SLC35G3Q8N808 338 aa8.28□□□□□ -1.08
SMARCD1-208ENST00000550280 METTL26Q96S19 204 aa8.28□□□□□ -1.08
SMARCD1-208ENST00000550280 TMEM231Q9H6L2 316 aa8.28□□□□□ -1.08
SMARCD1-208ENST00000550280 APOBP04114 4563 aaKnown RBP8.28□□□□□ -1.08
SMARCD1-208ENST00000550280 A0A1W2PS18 150 aa8.27□□□□□ -1.09
SMARCD1-208ENST00000550280 IFNA17P01571 189 aa8.27□□□□□ -1.09
SMARCD1-208ENST00000550280 IGLC1P0CG04 106 aa8.27□□□□□ -1.09
SMARCD1-208ENST00000550280 SNCAP37840 140 aa8.27□□□□□ -1.09
SMARCD1-208ENST00000550280 RPL5P46777 297 aaKnown RBP8.27□□□□□ -1.09
SMARCD1-208ENST00000550280 USF2Q15853 346 aaPredicted RBP8.27□□□□□ -1.09
SMARCD1-208ENST00000550280 SP6Q3SY56 376 aa8.27□□□□□ -1.09
SMARCD1-208ENST00000550280 AARDQ4LEZ3 155 aa8.27□□□□□ -1.09
SMARCD1-208ENST00000550280 PSMG4Q5JS54 123 aa8.27□□□□□ -1.09
SMARCD1-208ENST00000550280 GSG1LQ6UXU4 331 aa8.27□□□□□ -1.09
SMARCD1-208ENST00000550280 Q6ZR54 194 aa8.27□□□□□ -1.09
SMARCD1-208ENST00000550280 CROCCP3Q8IVE0 287 aa8.27□□□□□ -1.09
SMARCD1-208ENST00000550280 XCL2Q9UBD3 114 aa8.27□□□□□ -1.09
SMARCD1-208ENST00000550280 FAM90A26D6RGX4 464 aa8.26□□□□□ -1.09
SMARCD1-208ENST00000550280 H3BMM0 161 aa8.26□□□□□ -1.09
SMARCD1-208ENST00000550280 CORTO00230 105 aa8.26□□□□□ -1.09
SMARCD1-208ENST00000550280 CD74P04233 296 aa8.26□□□□□ -1.09
SMARCD1-208ENST00000550280 ELK1P19419 428 aa8.26□□□□□ -1.09
SMARCD1-208ENST00000550280 RCVRNP35243 200 aa8.26□□□□□ -1.09
SMARCD1-208ENST00000550280 OPRK1P41145 380 aa8.26□□□□□ -1.09
SMARCD1-208ENST00000550280 HOXA1P49639 335 aaPredicted RBP8.26□□□□□ -1.09
SMARCD1-208ENST00000550280 PIGPP57054 158 aa8.26□□□□□ -1.09
SMARCD1-208ENST00000550280 DHRS2Q13268 280 aa8.26□□□□□ -1.09
SMARCD1-208ENST00000550280 KCTD21Q4G0X4 260 aa8.26□□□□□ -1.09
SMARCD1-208ENST00000550280 GDF5OSQ5U4N7 250 aa8.26□□□□□ -1.09
SMARCD1-208ENST00000550280 PRSS54Q6PEW0 395 aa8.26□□□□□ -1.09
SMARCD1-208ENST00000550280 ZNF705AQ6ZN79 300 aaPredicted RBP8.26□□□□□ -1.09
SMARCD1-208ENST00000550280 ZNF575Q86XF7 245 aa8.26□□□□□ -1.09
SMARCD1-208ENST00000550280 OR4D10Q8NGI6 311 aa8.26□□□□□ -1.09
SMARCD1-208ENST00000550280 LHFPL5Q8TAF8 219 aa8.26□□□□□ -1.09
SMARCD1-208ENST00000550280 SCPEP1Q9HB40 452 aa8.26□□□□□ -1.09
SMARCD1-208ENST00000550280 COMMD3Q9UBI1 195 aa8.26□□□□□ -1.09
SMARCD1-208ENST00000550280 KLK11Q9UBX7 282 aa8.26□□□□□ -1.09
SMARCD1-208ENST00000550280 C3orf85A0A1B0GTC6 90 aa8.25□□□□□ -1.09
SMARCD1-208ENST00000550280 HELTA6NFD8 242 aa8.25□□□□□ -1.09
SMARCD1-208ENST00000550280 ZNF705FA8MVS1 300 aaPredicted RBP8.25□□□□□ -1.09
SMARCD1-208ENST00000550280 APOA1P02647 267 aa8.25□□□□□ -1.09
SMARCD1-208ENST00000550280 CD3DP04234 171 aa8.25□□□□□ -1.09
SMARCD1-208ENST00000550280 ZNF705DP0CH99 300 aaPredicted RBP8.25□□□□□ -1.09
SMARCD1-208ENST00000550280 ZNF705BP0CI00 300 aaPredicted RBP8.25□□□□□ -1.09
SMARCD1-208ENST00000550280 P0DMU3 169 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms