RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 PRH1P02810 166 aa6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 TPT1P13693 172 aaKnown RBP6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 ATP5IP56385 69 aaPredicted RBP6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 DEFA5Q01523 94 aa6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 CD69Q07108 199 aa6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 ZNF266Q14584 549 aa6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 ATP6V1FQ16864 119 aa6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 ECSCRQ19T08 205 aa6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 KLK9Q2XQG4 91 aa6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 TMEM95Q3KNT9 176 aa6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 C9orf152Q5JTZ5 239 aa6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 UNQ5815/PRO19632Q6UWF5 114 aa6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 ALKAL2Q6UX46 152 aa6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 SLC35E3Q7Z769 313 aa6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 BAP18Q8IXM2 172 aa6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 TMEM86BQ8N661 226 aa6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 HSD17B11Q8NBQ5 300 aa6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 ZNF680Q8NEM1 530 aa6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 FAM110DQ8TAY7 271 aaPredicted RBP6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 RNASEH2CQ8TDP1 164 aaKnown RBP6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 MISP3Q96FF7 219 aa6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 RSG1Q9BU20 258 aa6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 WDR61Q9GZS3 305 aaKnown RBP6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 SH3BGRL3Q9H299 93 aa6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 ZNF702PQ9H963 129 aa6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 UQCC1Q9NVA1 299 aa6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 LINC00527Q9UJ94 153 aa6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 KLK9Q9UKQ9 250 aa6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 WDR83OSQ9Y284 106 aa6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 U3KQE9 123 aa6.34□□□□□ -1.39
DEPDC4-207ENST00000549249 FBN3Q75N90 2809 aa6.33□□□□□ -1.4
DEPDC4-207ENST00000549249 IGLV11-55A0A075B6I3 123 aa6.33□□□□□ -1.4
DEPDC4-207ENST00000549249 IGKV1OR2-108A0A075B7D4 117 aa6.33□□□□□ -1.4
DEPDC4-207ENST00000549249 IGHV3-21A0A0B4J1V1 117 aa6.33□□□□□ -1.4
DEPDC4-207ENST00000549249 TRAV41A0A0B4J266 112 aa6.33□□□□□ -1.4
DEPDC4-207ENST00000549249 FNDC10F2Z333 226 aa6.33□□□□□ -1.4
DEPDC4-207ENST00000549249 I3L2K1 104 aa6.33□□□□□ -1.4
DEPDC4-207ENST00000549249 K7EIM0 57 aa6.33□□□□□ -1.4
DEPDC4-207ENST00000549249 IGHV3-48P01763 117 aa6.33□□□□□ -1.4
DEPDC4-207ENST00000549249 IGF1P05019 195 aa6.33□□□□□ -1.4
DEPDC4-207ENST00000549249 SPP1P10451 314 aa6.33□□□□□ -1.4
DEPDC4-207ENST00000549249 SRD5A1P18405 259 aa6.33□□□□□ -1.4
DEPDC4-207ENST00000549249 FGF7P21781 194 aa6.33□□□□□ -1.4
DEPDC4-207ENST00000549249 ATP6V0CP27449 155 aa6.33□□□□□ -1.4
DEPDC4-207ENST00000549249 PPIFP30405 207 aaKnown RBP6.33□□□□□ -1.4
DEPDC4-207ENST00000549249 OPRK1P41145 380 aa6.33□□□□□ -1.4
DEPDC4-207ENST00000549249 SUB1P53999 127 aaKnown RBP eCLIP6.33□□□□□ -1.4
DEPDC4-207ENST00000549249 GAMTQ14353 236 aa6.33□□□□□ -1.4
DEPDC4-207ENST00000549249 AKIRIN2Q53H80 203 aa6.33□□□□□ -1.4
DEPDC4-207ENST00000549249 FAM74A1Q5RGS3 127 aa6.33□□□□□ -1.4
DEPDC4-207ENST00000549249 SLC25A24Q6NUK1 477 aa6.33□□□□□ -1.4
DEPDC4-207ENST00000549249 SLC16A13Q7RTY0 426 aa6.33□□□□□ -1.4
DEPDC4-207ENST00000549249 OR5T1Q8NG75 326 aa6.33□□□□□ -1.4
DEPDC4-207ENST00000549249 OR2T6Q8NHC8 308 aa6.33□□□□□ -1.4
DEPDC4-207ENST00000549249 TMED6Q8WW62 240 aa6.33□□□□□ -1.4
DEPDC4-207ENST00000549249 NOL4LQ96MY1 436 aaPredicted RBP6.33□□□□□ -1.4
DEPDC4-207ENST00000549249 GGACTQ9BVM4 153 aa6.33□□□□□ -1.4
DEPDC4-207ENST00000549249 SLC25A32Q9H2D1 315 aa6.33□□□□□ -1.4
DEPDC4-207ENST00000549249 CDC42EP3Q9UKI2 254 aa6.33□□□□□ -1.4
DEPDC4-207ENST00000549249 LSM4Q9Y4Z0 139 aaKnown RBP6.33□□□□□ -1.4
DEPDC4-207ENST00000549249 IGKV1D-37A0A075B6S9 117 aa6.32□□□□□ -1.4
DEPDC4-207ENST00000549249 TRBV9A0A0B4J1U6 114 aa6.32□□□□□ -1.4
DEPDC4-207ENST00000549249 RPS10-NUDT3A0A1W2PQS6 291 aa6.32□□□□□ -1.4
DEPDC4-207ENST00000549249 SMCO3A2RU48 225 aa6.32□□□□□ -1.4
DEPDC4-207ENST00000549249 CORTO00230 105 aa6.32□□□□□ -1.4
DEPDC4-207ENST00000549249 NDUFB8O95169 186 aa6.32□□□□□ -1.4
DEPDC4-207ENST00000549249 MT-CO2P00403 227 aa6.32□□□□□ -1.4
DEPDC4-207ENST00000549249 IFNA5P01569 189 aa6.32□□□□□ -1.4
DEPDC4-207ENST00000549249 GPX4P36969 197 aaPredicted RBP6.32□□□□□ -1.4
DEPDC4-207ENST00000549249 EIF5AP63241 154 aaKnown RBP6.32□□□□□ -1.4
DEPDC4-207ENST00000549249 CFHR3Q02985 330 aa6.32□□□□□ -1.4
DEPDC4-207ENST00000549249 BTNL8Q6UX41 500 aa6.32□□□□□ -1.4
DEPDC4-207ENST00000549249 ZNF767PQ75MW2 155 aa6.32□□□□□ -1.4
DEPDC4-207ENST00000549249 TMEM144Q7Z5S9 345 aa6.32□□□□□ -1.4
DEPDC4-207ENST00000549249 Q8N2B8 174 aa6.32□□□□□ -1.4
DEPDC4-207ENST00000549249 SCARB1Q8WTV0 552 aa6.32□□□□□ -1.4
DEPDC4-207ENST00000549249 PCNPQ8WW12 178 aaKnown RBP6.32□□□□□ -1.4
DEPDC4-207ENST00000549249 CACNG8Q8WXS5 425 aa6.32□□□□□ -1.4
DEPDC4-207ENST00000549249 TMEM158Q8WZ71 300 aa6.32□□□□□ -1.4
DEPDC4-207ENST00000549249 TAF15Q92804 592 aaKnown RBP eCLIP6.32□□□□□ -1.4
DEPDC4-207ENST00000549249 PHYHIPLQ96FC7 376 aa6.32□□□□□ -1.4
DEPDC4-207ENST00000549249 TMEM68Q96MH6 324 aa6.32□□□□□ -1.4
DEPDC4-207ENST00000549249 MGST2Q99735 147 aa6.32□□□□□ -1.4
DEPDC4-207ENST00000549249 UBQLN2Q9UHD9 624 aa6.32□□□□□ -1.4
DEPDC4-207ENST00000549249 ZNF580Q9UK33 172 aa6.32□□□□□ -1.4
DEPDC4-207ENST00000549249 MFSD2BA6NFX1 497 aa6.31□□□□□ -1.4
DEPDC4-207ENST00000549249 CLDN34H7C241 214 aa6.31□□□□□ -1.4
DEPDC4-207ENST00000549249 AP4M1O00189 453 aa6.31□□□□□ -1.4
DEPDC4-207ENST00000549249 OR2J3O76001 311 aa6.31□□□□□ -1.4
DEPDC4-207ENST00000549249 IFNA7P01567 189 aa6.31□□□□□ -1.4
DEPDC4-207ENST00000549249 SEC11BP0C7V7 166 aa6.31□□□□□ -1.4
DEPDC4-207ENST00000549249 FAM157CP0CG43 387 aa6.31□□□□□ -1.4
DEPDC4-207ENST00000549249 DEFA4P12838 97 aa6.31□□□□□ -1.4
DEPDC4-207ENST00000549249 RND2P52198 227 aa6.31□□□□□ -1.4
DEPDC4-207ENST00000549249 HILS1P60008 231 aa6.31□□□□□ -1.4
DEPDC4-207ENST00000549249 AKR1C1Q04828 323 aa6.31□□□□□ -1.4
DEPDC4-207ENST00000549249 C10orf99Q6UWK7 81 aa6.31□□□□□ -1.4
DEPDC4-207ENST00000549249 CENPVQ7Z7K6 275 aaPredicted RBP6.31□□□□□ -1.4
DEPDC4-207ENST00000549249 THAP8Q8NA92 274 aa6.31□□□□□ -1.4
DEPDC4-207ENST00000549249 OR1L6Q8NGR2 347 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms