RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 ISLRO14498 428 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 WNT9BO14905 357 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 IGLC1P0CG04 106 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 OR13C7P0DN81 318 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 TPT1P13693 172 aaKnown RBP3.76□□□□□ -1.81
SCAF11-212ENST00000549162 CAV2P51636 162 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 SUB1P53999 127 aaKnown RBP eCLIP3.76□□□□□ -1.81
SCAF11-212ENST00000549162 HBG1P69891 147 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 HBG2P69892 147 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 TDRG1Q3Y452 100 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 AWAT1Q58HT5 328 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 FBXO7Q9Y3I1 522 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 SLC31A2O15432 143 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 FAM106CPP0CH98 169 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 HOXA1P49639 335 aaPredicted RBP3.76□□□□□ -1.81
SCAF11-212ENST00000549162 CTAG1AP78358 180 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 KLF5Q13887 457 aaPredicted RBP3.76□□□□□ -1.81
SCAF11-212ENST00000549162 Q6AWC8 147 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 SLC35E3Q7Z769 313 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 ALKBH7Q9BT30 221 aaPredicted RBP3.76□□□□□ -1.81
SCAF11-212ENST00000549162 PBDC1Q9BVG4 233 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 BANF2Q9H503 90 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 WFDC1Q9HC57 220 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 NPVFQ9HCQ7 196 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 U3KQK5 164 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 MEX3AA1L020 520 aaKnown RBP3.76□□□□□ -1.81
SCAF11-212ENST00000549162 HSBP1L1C9JCN9 74 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 CYB5R3P00387 301 aaPredicted RBP3.76□□□□□ -1.81
SCAF11-212ENST00000549162 PMP2P02689 132 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 SNCAP37840 140 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 RFC3P40938 356 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 MFAP2P55001 183 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 CD300CQ08708 224 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 C9orf47Q6ZRZ4 202 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 PPP1R27Q86WC6 154 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 ZNF491Q8N8L2 437 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 SHANK2-AS3Q9BTD1 123 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 SERTAD4Q9NUC0 356 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 POU2F3Q9UKI9 436 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 DNAH17Q9UFH2 4485 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 IGHV4-61A0A0C4DH41 118 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 OR7C1O76099 320 aaPredicted RBP3.76□□□□□ -1.81
SCAF11-212ENST00000549162 SAA1P0DJI8 122 aaPredicted RBP3.76□□□□□ -1.81
SCAF11-212ENST00000549162 RBMXP38159 391 aaKnown RBP3.76□□□□□ -1.81
SCAF11-212ENST00000549162 OR1L4Q8NGR5 311 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 DPF1Q92782 380 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 GGTLC1Q9BX51 225 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 GSN-AS1Q9NRJ2 163 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 TP53TG1Q9Y2A0 90 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 ZFHX4Q86UP3 3567 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 CTXND1A0A1B0GTU2 59 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 MMP23AO75900 390 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 YIF1AO95070 293 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 SPINK2P20155 84 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 PVALBP20472 110 aaPredicted RBP3.75□□□□□ -1.81
SCAF11-212ENST00000549162 PROK1P58294 105 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 ZNF493Q6ZR52 646 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 BAP18Q8IXM2 172 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 FLYWCH2Q96CP2 140 aaKnown RBP3.75□□□□□ -1.81
SCAF11-212ENST00000549162 MBD2Q9UBB5 411 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 ITPR1Q14643 2758 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 C17orf112F2Z3M2 114 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 DUX4L4P0CJ87 422 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 RCC1P18754 421 aaPredicted RBP3.75□□□□□ -1.81
SCAF11-212ENST00000549162 HNF4GQ14541 408 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 NKAPLQ5M9Q1 402 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 SLC16A13Q7RTY0 426 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 LHFPL4Q7Z7J7 247 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 FAM216BQ8N7L0 139 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 OR4B1Q8NGF8 309 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 SSMEM1Q8WWF3 244 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 TAF15Q92804 592 aaKnown RBP eCLIP3.75□□□□□ -1.81
SCAF11-212ENST00000549162 ARL11Q969Q4 196 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 MRPL20Q9BYC9 149 aaKnown RBP3.75□□□□□ -1.81
SCAF11-212ENST00000549162 BIN3Q9NQY0 253 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 TRAPPC2LQ9UL33 140 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 PDE6DO43924 150 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 TSPAN15O95858 294 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 GYPAP02724 150 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 LPAR6P43657 344 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 NKX2-1P43699 371 aaPredicted RBP3.75□□□□□ -1.81
SCAF11-212ENST00000549162 CLEC12BQ2HXU8 276 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 PHLDA2Q53GA4 152 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 PRAMEF5Q5TYX0 476 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 ZNF680Q8NEM1 530 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 PPP1R1CQ8WVI7 109 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 GPER1Q99527 375 aa3.75□□□□□ -1.81
SCAF11-212ENST00000549162 HDHD3Q9BSH5 251 aaPredicted RBP3.75□□□□□ -1.81
SCAF11-212ENST00000549162 FRAS1Q86XX4 4008 aa3.74□□□□□ -1.81
SCAF11-212ENST00000549162 C19orf71A6NCJ1 209 aa3.74□□□□□ -1.81
SCAF11-212ENST00000549162 S1PR2O95136 353 aa3.74□□□□□ -1.81
SCAF11-212ENST00000549162 CLDN12P56749 244 aa3.74□□□□□ -1.81
SCAF11-212ENST00000549162 B2MP61769 119 aa3.74□□□□□ -1.81
SCAF11-212ENST00000549162 AESQ08117 197 aa3.74□□□□□ -1.81
SCAF11-212ENST00000549162 ZNF503Q96F45 646 aa3.74□□□□□ -1.81
SCAF11-212ENST00000549162 CLCC1Q96S66 551 aa3.74□□□□□ -1.81
SCAF11-212ENST00000549162 RSG1Q9BU20 258 aa3.74□□□□□ -1.81
SCAF11-212ENST00000549162 OR2D2Q9H210 308 aa3.74□□□□□ -1.81
SCAF11-212ENST00000549162 PKD1L2Q7Z442 2459 aa3.74□□□□□ -1.81
SCAF11-212ENST00000549162 PKHD1P08F94 4074 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms