RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 H3BUA1 57 aa5.16□□□□□ -1.58
CDCA3-209ENST00000544610 ARPC5O15511 151 aa5.16□□□□□ -1.58
CDCA3-209ENST00000544610 PLXNB1O43157 2135 aa5.16□□□□□ -1.58
CDCA3-209ENST00000544610 SSSCA1O60232 199 aa5.16□□□□□ -1.58
CDCA3-209ENST00000544610 MPDU1O75352 247 aa5.16□□□□□ -1.58
CDCA3-209ENST00000544610 TMEM50AO95807 157 aa5.16□□□□□ -1.58
CDCA3-209ENST00000544610 IGLV1-40P01703 118 aa5.16□□□□□ -1.58
CDCA3-209ENST00000544610 OR8U8P0C7N1 319 aa5.16□□□□□ -1.58
CDCA3-209ENST00000544610 GPX4P36969 197 aaPredicted RBP5.16□□□□□ -1.58
CDCA3-209ENST00000544610 CX3CL1P78423 397 aa5.16□□□□□ -1.58
CDCA3-209ENST00000544610 CD300CQ08708 224 aa5.16□□□□□ -1.58
CDCA3-209ENST00000544610 TMEM267Q0VDI3 215 aaPredicted RBP5.16□□□□□ -1.58
CDCA3-209ENST00000544610 EXOSC2Q13868 293 aaKnown RBP5.16□□□□□ -1.58
CDCA3-209ENST00000544610 PLGLAQ15195 96 aa5.16□□□□□ -1.58
CDCA3-209ENST00000544610 VWC2Q2TAL6 325 aa5.16□□□□□ -1.58
CDCA3-209ENST00000544610 LGALSLQ3ZCW2 172 aaPredicted RBP5.16□□□□□ -1.58
CDCA3-209ENST00000544610 LRRC37A5PQ49AS3 106 aa5.16□□□□□ -1.58
CDCA3-209ENST00000544610 Q5BKY6 102 aa5.16□□□□□ -1.58
CDCA3-209ENST00000544610 KHDC1LQ5JSQ8 128 aa5.16□□□□□ -1.58
CDCA3-209ENST00000544610 ETFRF1Q6IPR1 90 aa5.16□□□□□ -1.58
CDCA3-209ENST00000544610 EIF5AL1Q6IS14 154 aaKnown RBP5.16□□□□□ -1.58
CDCA3-209ENST00000544610 SSX9Q7RTT3 188 aa5.16□□□□□ -1.58
CDCA3-209ENST00000544610 VKORC1L1Q8N0U8 176 aa5.16□□□□□ -1.58
CDCA3-209ENST00000544610 UBAC2Q8NBM4 344 aa5.16□□□□□ -1.58
CDCA3-209ENST00000544610 SLC24A4Q8NFF2 622 aa5.16□□□□□ -1.58
CDCA3-209ENST00000544610 OR10P1Q8NGE3 313 aa5.16□□□□□ -1.58
CDCA3-209ENST00000544610 SRSF12Q8WXF0 261 aaKnown RBP5.16□□□□□ -1.58
CDCA3-209ENST00000544610 SLC25A33Q9BSK2 321 aa5.16□□□□□ -1.58
CDCA3-209ENST00000544610 RBKSQ9H477 322 aa5.16□□□□□ -1.58
CDCA3-209ENST00000544610 HEYLQ9NQ87 328 aaPredicted RBP5.16□□□□□ -1.58
CDCA3-209ENST00000544610 PSENENQ9NZ42 101 aa5.16□□□□□ -1.58
CDCA3-209ENST00000544610 OR5AC2Q9NZP5 309 aa5.16□□□□□ -1.58
CDCA3-209ENST00000544610 LSM5Q9Y4Y9 91 aaKnown RBP5.16□□□□□ -1.58
CDCA3-209ENST00000544610 HSPB11Q9Y547 144 aa5.16□□□□□ -1.58
CDCA3-209ENST00000544610 BORCS7-ASMTA0A0B4J1R7 106 aa5.15□□□□□ -1.59
CDCA3-209ENST00000544610 TRAV3A0A0B4J244 114 aa5.15□□□□□ -1.59
CDCA3-209ENST00000544610 KANTRA0A1W2PQU2 76 aa5.15□□□□□ -1.59
CDCA3-209ENST00000544610 NCBP2LA6PVI3 153 aaKnown RBP5.15□□□□□ -1.59
CDCA3-209ENST00000544610 TEX22C9J3V5 150 aa5.15□□□□□ -1.59
CDCA3-209ENST00000544610 BOLA2-SMG1P6H3BVE0 249 aa5.15□□□□□ -1.59
CDCA3-209ENST00000544610 K7EIL1 84 aa5.15□□□□□ -1.59
CDCA3-209ENST00000544610 BCL2L11O43521 198 aa5.15□□□□□ -1.59
CDCA3-209ENST00000544610 IGHG2P01859 326 aa5.15□□□□□ -1.59
CDCA3-209ENST00000544610 IGLL1P15814 213 aa5.15□□□□□ -1.59
CDCA3-209ENST00000544610 HIST1H1BP16401 226 aaKnown RBP5.15□□□□□ -1.59
CDCA3-209ENST00000544610 CTRB1P17538 263 aa5.15□□□□□ -1.59
CDCA3-209ENST00000544610 MALP21145 153 aa5.15□□□□□ -1.59
CDCA3-209ENST00000544610 NPY1RP25929 384 aa5.15□□□□□ -1.59
CDCA3-209ENST00000544610 SNCAP37840 140 aa5.15□□□□□ -1.59
CDCA3-209ENST00000544610 HOXA1P49639 335 aaPredicted RBP5.15□□□□□ -1.59
CDCA3-209ENST00000544610 CAV2P51636 162 aa5.15□□□□□ -1.59
CDCA3-209ENST00000544610 DLK1P80370 383 aa5.15□□□□□ -1.59
CDCA3-209ENST00000544610 SSBP2P81877 361 aaPredicted RBP5.15□□□□□ -1.59
CDCA3-209ENST00000544610 EWSR1Q01844 656 aaKnown RBP eCLIP5.15□□□□□ -1.59
CDCA3-209ENST00000544610 FXYD3Q14802 87 aa5.15□□□□□ -1.59
CDCA3-209ENST00000544610 IZUMO4Q1ZYL8 232 aa5.15□□□□□ -1.59
CDCA3-209ENST00000544610 CTRB2Q6GPI1 263 aa5.15□□□□□ -1.59
CDCA3-209ENST00000544610 LAMTOR1Q6IAA8 161 aa5.15□□□□□ -1.59
CDCA3-209ENST00000544610 TMEM219Q86XT9 240 aa5.15□□□□□ -1.59
CDCA3-209ENST00000544610 TTC9CQ8N5M4 171 aa5.15□□□□□ -1.59
CDCA3-209ENST00000544610 ARPC1AQ92747 370 aa5.15□□□□□ -1.59
CDCA3-209ENST00000544610 RITA1Q96K30 269 aa5.15□□□□□ -1.59
CDCA3-209ENST00000544610 PRSS22Q9GZN4 317 aa5.15□□□□□ -1.59
CDCA3-209ENST00000544610 ARL6Q9H0F7 186 aa5.15□□□□□ -1.59
CDCA3-209ENST00000544610 ARV1Q9H2C2 271 aa5.15□□□□□ -1.59
CDCA3-209ENST00000544610 FBXL15Q9H469 300 aa5.15□□□□□ -1.59
CDCA3-209ENST00000544610 SLA2Q9H6Q3 261 aa5.15□□□□□ -1.59
CDCA3-209ENST00000544610 THYN1Q9P016 225 aa5.15□□□□□ -1.59
CDCA3-209ENST00000544610 F11RQ9Y624 299 aaKnown RBP5.15□□□□□ -1.59
CDCA3-209ENST00000544610 IGHV7-81A0A0B4J1V7 117 aa5.14□□□□□ -1.59
CDCA3-209ENST00000544610 RPS10-NUDT3A0A1W2PQS6 291 aa5.14□□□□□ -1.59
CDCA3-209ENST00000544610 CGB1A6NKQ9 187 aa5.14□□□□□ -1.59
CDCA3-209ENST00000544610 C15orf62A8K5M9 175 aa5.14□□□□□ -1.59
CDCA3-209ENST00000544610 PMS2P5A8MQ11 134 aa5.14□□□□□ -1.59
CDCA3-209ENST00000544610 PRSS46E5RG02 174 aa5.14□□□□□ -1.59
CDCA3-209ENST00000544610 AP4M1O00189 453 aa5.14□□□□□ -1.59
CDCA3-209ENST00000544610 CNIH1O95406 144 aa5.14□□□□□ -1.59
CDCA3-209ENST00000544610 CA2P00918 260 aa5.14□□□□□ -1.59
CDCA3-209ENST00000544610 IFNA10P01566 189 aa5.14□□□□□ -1.59
CDCA3-209ENST00000544610 AMY1AP04745 511 aa5.14□□□□□ -1.59
CDCA3-209ENST00000544610 RNASE2P10153 161 aaKnown RBP5.14□□□□□ -1.59
CDCA3-209ENST00000544610 CXCL2P19875 107 aa5.14□□□□□ -1.59
CDCA3-209ENST00000544610 FCGR2BP31994 310 aaPredicted RBP5.14□□□□□ -1.59
CDCA3-209ENST00000544610 RAB5CP51148 216 aa5.14□□□□□ -1.59
CDCA3-209ENST00000544610 BLCAPP62952 87 aa5.14□□□□□ -1.59
CDCA3-209ENST00000544610 WT1-ASQ06250 92 aa5.14□□□□□ -1.59
CDCA3-209ENST00000544610 OPCMLQ14982 345 aa5.14□□□□□ -1.59
CDCA3-209ENST00000544610 TNXAQ16473 311 aa5.14□□□□□ -1.59
CDCA3-209ENST00000544610 C19orf54Q5BKX5 351 aa5.14□□□□□ -1.59
CDCA3-209ENST00000544610 SPANXN5Q5MJ07 72 aa5.14□□□□□ -1.59
CDCA3-209ENST00000544610 TEPPQ6URK8 271 aa5.14□□□□□ -1.59
CDCA3-209ENST00000544610 TMUB2Q71RG4 321 aa5.14□□□□□ -1.59
CDCA3-209ENST00000544610 ZNF767PQ75MW2 155 aa5.14□□□□□ -1.59
CDCA3-209ENST00000544610 CENPVQ7Z7K6 275 aaPredicted RBP5.14□□□□□ -1.59
CDCA3-209ENST00000544610 OR1S2Q8NGQ3 325 aa5.14□□□□□ -1.59
CDCA3-209ENST00000544610 LRRC20Q8TCA0 184 aa5.14□□□□□ -1.59
CDCA3-209ENST00000544610 GNPNAT1Q96EK6 184 aaPredicted RBP5.14□□□□□ -1.59
CDCA3-209ENST00000544610 MISP3Q96FF7 219 aa5.14□□□□□ -1.59
CDCA3-209ENST00000544610 ATP5SQ99766 215 aa5.14□□□□□ -1.59
CDCA3-209ENST00000544610 TMEM147Q9BVK8 224 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms