RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 SSX7Q7RTT5 188 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 LRRTM1Q86UE6 522 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 VKORC1L1Q8N0U8 176 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 CBR4Q8N4T8 237 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 GGHQ92820 318 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 CCDC124Q96CT7 223 aaKnown RBP2.83□□□□□ -1.96
SNHG1-220ENST00000544550 LGALS12Q96DT0 336 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 SMIM19Q96E16 107 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 TXN2Q99757 166 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 SLC29A1Q99808 456 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 CMSS1Q9BQ75 279 aaKnown RBP2.83□□□□□ -1.96
SNHG1-220ENST00000544550 GINS4Q9BRT9 223 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 UPK3BQ9BT76 320 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 URM1Q9BTM9 101 aaKnown RBP2.83□□□□□ -1.96
SNHG1-220ENST00000544550 CABLES2Q9BTV7 478 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 TM2D1Q9BX74 207 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 GABARAPL3Q9BY60 117 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 COMMD5Q9GZQ3 224 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 FNDC4Q9H6D8 234 aaPredicted RBP2.83□□□□□ -1.96
SNHG1-220ENST00000544550 VSIRQ9H7M9 311 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 BET1LQ9NYM9 111 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 GAGE2DQ9UEU5 116 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 AK3Q9UIJ7 227 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 FAT1Q14517 4588 aa2.83□□□□□ -1.96
SNHG1-220ENST00000544550 TRAV8-7A0A075B6U6 113 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 IGHV3OR16-12A0A075B7B8 117 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 TRBV5-5A0A0J9YX44 114 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 IGLC7A0M8Q6 106 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 LYRM9A8MSI8 78 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 HBE1P02100 147 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 ALPLP05186 524 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 CDK1P06493 297 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 SERPINE2P07093 398 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 CTSGP08311 255 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 ZNF688P0C7X2 276 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 VPREB1P12018 145 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 MAPK3P27361 379 aaPredicted RBP2.82□□□□□ -1.96
SNHG1-220ENST00000544550 DCKP27707 260 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 HTR2CP28335 458 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 RANBP1P43487 201 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 GTF2A1P52655 376 aaPredicted RBP2.82□□□□□ -1.96
SNHG1-220ENST00000544550 AP2S1P53680 142 aaPredicted RBP2.82□□□□□ -1.96
SNHG1-220ENST00000544550 LINC00315P59091 139 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 KRTAP10-1P60331 282 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 SNRPD3P62318 126 aaKnown RBP2.82□□□□□ -1.96
SNHG1-220ENST00000544550 UBE2V1Q13404 147 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 RRN3P1Q2M238 152 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 RBM48Q5RL73 367 aaKnown RBP2.82□□□□□ -1.96
SNHG1-220ENST00000544550 ZNF773Q6PK81 442 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 TMPRSS11AQ6ZMR5 421 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 NFE4Q86UQ8 179 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 FAM24BQ8N5W8 94 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 Q8N9P0 234 aaPredicted RBP2.82□□□□□ -1.96
SNHG1-220ENST00000544550 STXBP6Q8NFX7 210 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 TSPAN14Q8NG11 270 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 C5orf30Q96GV9 206 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 NARS2Q96I59 477 aaKnown RBP2.82□□□□□ -1.96
SNHG1-220ENST00000544550 CYYR1Q96J86 154 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 ZNF479Q96JC4 524 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 Q96MT0 163 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 RAB40CQ96S21 281 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 HSD17B10Q99714 261 aaKnown RBP2.82□□□□□ -1.96
SNHG1-220ENST00000544550 CIB1Q99828 191 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 NXF2Q9GZY0 626 aaKnown RBP2.82□□□□□ -1.96
SNHG1-220ENST00000544550 GABARAPL1Q9H0R8 117 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 HRASLSQ9HDD0 168 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 XCL2Q9UBD3 114 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 GOLT1BQ9Y3E0 138 aa2.82□□□□□ -1.96
SNHG1-220ENST00000544550 YTHDF2Q9Y5A9 579 aaKnown RBP2.82□□□□□ -1.96
SNHG1-220ENST00000544550 IGHV3OR16-13A0A075B7E8 117 aa2.81□□□□□ -1.96
SNHG1-220ENST00000544550 IGHV3-74A0A0B4J1X5 117 aa2.81□□□□□ -1.96
SNHG1-220ENST00000544550 HELTA6NFD8 242 aa2.81□□□□□ -1.96
SNHG1-220ENST00000544550 TMEM14DPA8MWL7 114 aa2.81□□□□□ -1.96
SNHG1-220ENST00000544550 F5H768 121 aa2.81□□□□□ -1.96
SNHG1-220ENST00000544550 GNG7O60262 68 aa2.81□□□□□ -1.96
SNHG1-220ENST00000544550 SCGB2A1O75556 95 aa2.81□□□□□ -1.96
SNHG1-220ENST00000544550 ATP5G1P05496 136 aa2.81□□□□□ -1.96
SNHG1-220ENST00000544550 CD3GP09693 182 aa2.81□□□□□ -1.96
SNHG1-220ENST00000544550 TRAPPC2P0DI81 140 aa2.81□□□□□ -1.96
SNHG1-220ENST00000544550 TRAPPC2BP0DI82 140 aa2.81□□□□□ -1.96
SNHG1-220ENST00000544550 OR13C7P0DN81 318 aa2.81□□□□□ -1.96
SNHG1-220ENST00000544550 NPPCP23582 126 aa2.81□□□□□ -1.96
SNHG1-220ENST00000544550 ATP5G3P48201 142 aa2.81□□□□□ -1.96
SNHG1-220ENST00000544550 TAS2R31P59538 309 aa2.81□□□□□ -1.96
SNHG1-220ENST00000544550 SNRPEP62304 92 aaKnown RBP2.81□□□□□ -1.96
SNHG1-220ENST00000544550 TIMM50Q3ZCQ8 353 aa2.81□□□□□ -1.96
SNHG1-220ENST00000544550 OR2B11Q5JQS5 317 aa2.81□□□□□ -1.96
SNHG1-220ENST00000544550 PSMG4Q5JS54 123 aa2.81□□□□□ -1.96
SNHG1-220ENST00000544550 ZNF600Q6ZNG1 722 aa2.81□□□□□ -1.96
SNHG1-220ENST00000544550 SPATA24Q86W54 205 aa2.81□□□□□ -1.96
SNHG1-220ENST00000544550 OR52I2Q8NH67 350 aa2.81□□□□□ -1.96
SNHG1-220ENST00000544550 DCANP1Q8TF63 244 aa2.81□□□□□ -1.96
SNHG1-220ENST00000544550 TCTEX1D2Q8WW35 142 aa2.81□□□□□ -1.96
SNHG1-220ENST00000544550 LSM10Q969L4 123 aaKnown RBP2.81□□□□□ -1.96
SNHG1-220ENST00000544550 METTL26Q96S19 204 aa2.81□□□□□ -1.96
SNHG1-220ENST00000544550 C7orf50Q9BRJ6 194 aaKnown RBP2.81□□□□□ -1.96
SNHG1-220ENST00000544550 HDHD3Q9BSH5 251 aaPredicted RBP2.81□□□□□ -1.96
SNHG1-220ENST00000544550 KRTAP1-5Q9BYS1 174 aa2.81□□□□□ -1.96
SNHG1-220ENST00000544550 BABAM2Q9NXR7 383 aa2.81□□□□□ -1.96
SNHG1-220ENST00000544550 RBMX2Q9Y388 322 aaKnown RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms