RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 IGHV3-48P01763 117 aa15.7■□□□□ 0.1
COPS7A-218ENST00000543939 HLA-DRB1P01911 266 aa15.7■□□□□ 0.1
COPS7A-218ENST00000543939 IGKV1D-37A0A075B6S9 117 aa15.69■□□□□ 0.1
COPS7A-218ENST00000543939 IGHV7-81A0A0B4J1V7 117 aa15.69■□□□□ 0.1
COPS7A-218ENST00000543939 A0A1W2PPV4 95 aa15.69■□□□□ 0.1
COPS7A-218ENST00000543939 RND2P52198 227 aa15.69■□□□□ 0.1
COPS7A-218ENST00000543939 DEFA5Q01523 94 aa15.69■□□□□ 0.1
COPS7A-218ENST00000543939 KHDC3LQ587J8 217 aa15.69■□□□□ 0.1
COPS7A-218ENST00000543939 ASPHD1Q5U4P2 390 aa15.69■□□□□ 0.1
COPS7A-218ENST00000543939 CYP2G1PQ6ZSU1 146 aa15.69■□□□□ 0.1
COPS7A-218ENST00000543939 PIFOQ8TCI5 191 aa15.69■□□□□ 0.1
COPS7A-218ENST00000543939 SLC35B3Q9H1N7 401 aa15.69■□□□□ 0.1
COPS7A-218ENST00000543939 ABCA12Q86UK0 2595 aa15.69■□□□□ 0.1
COPS7A-218ENST00000543939 MT-CO2P00403 227 aa15.68■□□□□ 0.1
COPS7A-218ENST00000543939 BCL2P10415 239 aa15.68■□□□□ 0.1
COPS7A-218ENST00000543939 GUCA2BQ16661 112 aa15.68■□□□□ 0.1
COPS7A-218ENST00000543939 TMEM249Q2WGJ8 235 aa15.68■□□□□ 0.1
COPS7A-218ENST00000543939 PRSS57Q6UWY2 283 aa15.68■□□□□ 0.1
COPS7A-218ENST00000543939 KRTAP1-3Q8IUG1 177 aa15.68■□□□□ 0.1
COPS7A-218ENST00000543939 TMEM116Q8NCL8 245 aa15.68■□□□□ 0.1
COPS7A-218ENST00000543939 MAPK1IP1LQ8NDC0 245 aa15.68■□□□□ 0.1
COPS7A-218ENST00000543939 RASL11BQ9BPW5 248 aa15.68■□□□□ 0.1
COPS7A-218ENST00000543939 ZFP92A6NM28 416 aa15.68■□□□□ 0.1
COPS7A-218ENST00000543939 NPIPB5A8MRT5 1133 aa15.68■□□□□ 0.1
COPS7A-218ENST00000543939 I3L2K1 104 aa15.68■□□□□ 0.1
COPS7A-218ENST00000543939 J3QLI3 93 aa15.68■□□□□ 0.1
COPS7A-218ENST00000543939 HSPB1P04792 205 aaKnown RBP15.68■□□□□ 0.1
COPS7A-218ENST00000543939 SRP19P09132 144 aaKnown RBP15.68■□□□□ 0.1
COPS7A-218ENST00000543939 EGR2P11161 476 aaPredicted RBP15.68■□□□□ 0.1
COPS7A-218ENST00000543939 GATA2P23769 480 aaPredicted RBP15.68■□□□□ 0.1
COPS7A-218ENST00000543939 OR1L6Q8NGR2 347 aa15.68■□□□□ 0.1
COPS7A-218ENST00000543939 RXFP4Q8TDU9 374 aa15.68■□□□□ 0.1
COPS7A-218ENST00000543939 TMPRSS5Q9H3S3 457 aa15.68■□□□□ 0.1
COPS7A-218ENST00000543939 TCRBV4S1A1TA0A5B7 111 aa15.67■□□□□ 0.1
COPS7A-218ENST00000543939 TSPAN9O75954 239 aa15.67■□□□□ 0.1
COPS7A-218ENST00000543939 IFNA1P01562 189 aa15.67■□□□□ 0.1
COPS7A-218ENST00000543939 ATRAIDQ6UW56 229 aa15.67■□□□□ 0.1
COPS7A-218ENST00000543939 SVBPQ8N300 66 aa15.67■□□□□ 0.1
COPS7A-218ENST00000543939 TTC9CQ8N5M4 171 aa15.67■□□□□ 0.1
COPS7A-218ENST00000543939 SOX21Q9Y651 276 aaPredicted RBP15.67■□□□□ 0.1
COPS7A-218ENST00000543939 ABCA1O95477 2261 aa15.66■□□□□ 0.1
COPS7A-218ENST00000543939 TGFAP01135 160 aa15.66■□□□□ 0.1
COPS7A-218ENST00000543939 STAG3L2P0CL84 134 aa15.66■□□□□ 0.1
COPS7A-218ENST00000543939 STAG3L3P0CL85 134 aa15.66■□□□□ 0.1
COPS7A-218ENST00000543939 IGHV4-31P0DP07 118 aa15.66■□□□□ 0.1
COPS7A-218ENST00000543939 RHOBP62745 196 aa15.66■□□□□ 0.1
COPS7A-218ENST00000543939 C22orf15Q8WYQ4 148 aa15.66■□□□□ 0.1
COPS7A-218ENST00000543939 RBM14Q96PK6 669 aaKnown RBP15.66■□□□□ 0.1
COPS7A-218ENST00000543939 HSPB9Q9BQS6 159 aa15.66■□□□□ 0.1
COPS7A-218ENST00000543939 SEPSECSQ9HD40 501 aaKnown RBP15.66■□□□□ 0.1
COPS7A-218ENST00000543939 NAV2Q8IVL1 2488 aa15.66■□□□□ 0.1
COPS7A-218ENST00000543939 APCP25054 2843 aa15.66■□□□□ 0.1
COPS7A-218ENST00000543939 IGHV3-21A0A0B4J1V1 117 aa15.65■□□□□ 0.1
COPS7A-218ENST00000543939 RBMS3Q6XE24 437 aaKnown RBP15.65■□□□□ 0.1
COPS7A-218ENST00000543939 SLC35E3Q7Z769 313 aa15.65■□□□□ 0.1
COPS7A-218ENST00000543939 C5orf56Q8N8D9 126 aa15.65■□□□□ 0.1
COPS7A-218ENST00000543939 Q96MF0 132 aa15.65■□□□□ 0.1
COPS7A-218ENST00000543939 SSX3Q99909 188 aa15.65■□□□□ 0.1
COPS7A-218ENST00000543939 VAX2Q9UIW0 290 aa15.65■□□□□ 0.1
COPS7A-218ENST00000543939 CSMD2Q7Z408 3487 aa15.65■□□□□ 0.1
COPS7A-218ENST00000543939 SPATA31B1PQ5VZV4 182 aa15.65■□□□□ 0.1
COPS7A-218ENST00000543939 TRGV9Q99603 122 aa15.65■□□□□ 0.1
COPS7A-218ENST00000543939 PSMB11A5LHX3 300 aa15.64■□□□□ 0.09
COPS7A-218ENST00000543939 K7EIM0 57 aa15.64■□□□□ 0.09
COPS7A-218ENST00000543939 FBP1P09467 338 aa15.64■□□□□ 0.09
COPS7A-218ENST00000543939 PSMB3P49720 205 aa15.64■□□□□ 0.09
COPS7A-218ENST00000543939 SELENOTP62341 195 aa15.64■□□□□ 0.09
COPS7A-218ENST00000543939 ZNF90Q03938 601 aa15.64■□□□□ 0.09
COPS7A-218ENST00000543939 C19orf24Q9BVV8 132 aa15.64■□□□□ 0.09
COPS7A-218ENST00000543939 MANBALQ9NQG1 85 aa15.64■□□□□ 0.09
COPS7A-218ENST00000543939 TNFRSF19Q9NS68 423 aa15.64■□□□□ 0.09
COPS7A-218ENST00000543939 MOB4Q9Y3A3 225 aa15.64■□□□□ 0.09
COPS7A-218ENST00000543939 MAP1AP78559 2803 aaPredicted RBP15.64■□□□□ 0.09
COPS7A-218ENST00000543939 IGLV11-55A0A075B6I3 123 aa15.63■□□□□ 0.09
COPS7A-218ENST00000543939 OR5G3P0C626 314 aa15.63■□□□□ 0.09
COPS7A-218ENST00000543939 TMEM219Q86XT9 240 aa15.63■□□□□ 0.09
COPS7A-218ENST00000543939 OR4X1Q8NH49 305 aa15.63■□□□□ 0.09
COPS7A-218ENST00000543939 FANCD2OSQ96PS1 177 aa15.63■□□□□ 0.09
COPS7A-218ENST00000543939 HELZ2Q9BYK8 2649 aaKnown RBP15.63■□□□□ 0.09
COPS7A-218ENST00000543939 CXorf1O96002 111 aa15.63■□□□□ 0.09
COPS7A-218ENST00000543939 ARL14EPLP0DKL9 152 aa15.63■□□□□ 0.09
COPS7A-218ENST00000543939 TAGLN2P37802 199 aaKnown RBP15.63■□□□□ 0.09
COPS7A-218ENST00000543939 FAM78BQ5VT40 261 aa15.63■□□□□ 0.09
COPS7A-218ENST00000543939 SGMS2Q8NHU3 365 aa15.63■□□□□ 0.09
COPS7A-218ENST00000543939 GATAD1Q8WUU5 269 aa15.63■□□□□ 0.09
COPS7A-218ENST00000543939 NKX6-2Q9C056 277 aaPredicted RBP15.63■□□□□ 0.09
COPS7A-218ENST00000543939 FUT9Q9Y231 359 aa15.63■□□□□ 0.09
COPS7A-218ENST00000543939 PRRC2AP48634 2157 aaKnown RBP15.62■□□□□ 0.09
COPS7A-218ENST00000543939 SOHLH1Q5JUK2 328 aa15.62■□□□□ 0.09
COPS7A-218ENST00000543939 SPNS3Q6ZMD2 512 aa15.62■□□□□ 0.09
COPS7A-218ENST00000543939 MIR17HGQ75NE6 70 aa15.62■□□□□ 0.09
COPS7A-218ENST00000543939 IQCF2Q8IXL9 164 aa15.62■□□□□ 0.09
COPS7A-218ENST00000543939 CYB561D1Q8N8Q1 229 aa15.62■□□□□ 0.09
COPS7A-218ENST00000543939 TMEM37Q8WXS4 190 aa15.62■□□□□ 0.09
COPS7A-218ENST00000543939 SNAPINO95295 136 aa15.61■□□□□ 0.09
COPS7A-218ENST00000543939 AMY1AP04745 511 aa15.61■□□□□ 0.09
COPS7A-218ENST00000543939 BPIFB3P59826 476 aa15.61■□□□□ 0.09
COPS7A-218ENST00000543939 A6NDX4 124 aa15.6■□□□□ 0.09
COPS7A-218ENST00000543939 H3BUX3 64 aa15.6■□□□□ 0.09
COPS7A-218ENST00000543939 ATP6V0E1O15342 81 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms