RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 RBMS3Q6XE24 437 aaKnown RBP13.71□□□□□ -0.21
TMEM50B-210ENST00000542230 SPNS3Q6ZMD2 512 aa13.71□□□□□ -0.21
TMEM50B-210ENST00000542230 CACNG8Q8WXS5 425 aa13.71□□□□□ -0.21
TMEM50B-210ENST00000542230 DOK5Q9P104 306 aa13.71□□□□□ -0.21
TMEM50B-210ENST00000542230 NCBP2LA6PVI3 153 aaKnown RBP13.71□□□□□ -0.22
TMEM50B-210ENST00000542230 PSMB3P49720 205 aa13.71□□□□□ -0.22
TMEM50B-210ENST00000542230 NDPQ00604 133 aa13.71□□□□□ -0.22
TMEM50B-210ENST00000542230 RNASEH2CQ8TDP1 164 aaKnown RBP13.71□□□□□ -0.22
TMEM50B-210ENST00000542230 RPUSD4Q96CM3 377 aaKnown RBP13.71□□□□□ -0.22
TMEM50B-210ENST00000542230 HELZ2Q9BYK8 2649 aaKnown RBP13.71□□□□□ -0.22
TMEM50B-210ENST00000542230 DOPEY2Q9Y3R5 2298 aa13.7□□□□□ -0.22
TMEM50B-210ENST00000542230 IFNA1P01562 189 aa13.7□□□□□ -0.22
TMEM50B-210ENST00000542230 UBE2E1P51965 193 aa13.7□□□□□ -0.22
TMEM50B-210ENST00000542230 SUB1P53999 127 aaKnown RBP eCLIP13.7□□□□□ -0.22
TMEM50B-210ENST00000542230 PMS2P11Q13670 270 aa13.7□□□□□ -0.22
TMEM50B-210ENST00000542230 RNF5Q99942 180 aa13.7□□□□□ -0.22
TMEM50B-210ENST00000542230 PIMREGQ9BSJ6 248 aa13.7□□□□□ -0.22
TMEM50B-210ENST00000542230 SOX21Q9Y651 276 aaPredicted RBP13.7□□□□□ -0.22
TMEM50B-210ENST00000542230 CENPVL3A0A0U1RRI6 287 aa13.69□□□□□ -0.22
TMEM50B-210ENST00000542230 VWC2LB2RUY7 222 aa13.69□□□□□ -0.22
TMEM50B-210ENST00000542230 NDUFA3O95167 84 aa13.69□□□□□ -0.22
TMEM50B-210ENST00000542230 C5orf64Q2M2E5 130 aa13.69□□□□□ -0.22
TMEM50B-210ENST00000542230 CST9LP1Q5W188 147 aa13.69□□□□□ -0.22
TMEM50B-210ENST00000542230 NPBQ8NG41 125 aa13.69□□□□□ -0.22
TMEM50B-210ENST00000542230 NIPSNAP3BQ9BS92 247 aa13.69□□□□□ -0.22
TMEM50B-210ENST00000542230 KMT2BQ9UMN6 2715 aaPredicted RBP13.69□□□□□ -0.22
TMEM50B-210ENST00000542230 TRAV5A0A0B4J249 113 aa13.69□□□□□ -0.22
TMEM50B-210ENST00000542230 COLCA2A8K830 154 aa13.69□□□□□ -0.22
TMEM50B-210ENST00000542230 C11orf94C9JXX5 98 aa13.69□□□□□ -0.22
TMEM50B-210ENST00000542230 MAS1LP35410 378 aa13.69□□□□□ -0.22
TMEM50B-210ENST00000542230 KRTAP10-9P60411 292 aa13.69□□□□□ -0.22
TMEM50B-210ENST00000542230 FXYD3Q14802 87 aa13.69□□□□□ -0.22
TMEM50B-210ENST00000542230 UHRF2Q96PU4 802 aa13.69□□□□□ -0.22
TMEM50B-210ENST00000542230 YTHDF2Q9Y5A9 579 aaKnown RBP13.69□□□□□ -0.22
TMEM50B-210ENST00000542230 F11RQ9Y624 299 aaKnown RBP13.69□□□□□ -0.22
TMEM50B-210ENST00000542230 MT-CO2P00403 227 aa13.68□□□□□ -0.22
TMEM50B-210ENST00000542230 PVRIGQ6DKI7 326 aa13.68□□□□□ -0.22
TMEM50B-210ENST00000542230 CYP2G1PQ6ZSU1 146 aa13.68□□□□□ -0.22
TMEM50B-210ENST00000542230 Q8N6K4 173 aa13.68□□□□□ -0.22
TMEM50B-210ENST00000542230 OR2T10Q8NGZ9 312 aa13.68□□□□□ -0.22
TMEM50B-210ENST00000542230 ZNF503Q96F45 646 aa13.68□□□□□ -0.22
TMEM50B-210ENST00000542230 DERL1Q9BUN8 251 aa13.68□□□□□ -0.22
TMEM50B-210ENST00000542230 WNT10AQ9GZT5 417 aa13.68□□□□□ -0.22
TMEM50B-210ENST00000542230 S4R3C0 116 aa13.68□□□□□ -0.22
TMEM50B-210ENST00000542230 SNRPCP09234 159 aaKnown RBP13.68□□□□□ -0.22
TMEM50B-210ENST00000542230 TAGLN2P37802 199 aaKnown RBP13.68□□□□□ -0.22
TMEM50B-210ENST00000542230 RHOBP62745 196 aa13.68□□□□□ -0.22
TMEM50B-210ENST00000542230 MINOS1Q5TGZ0 78 aa13.68□□□□□ -0.22
TMEM50B-210ENST00000542230 CLEC2AQ6UVW9 174 aa13.68□□□□□ -0.22
TMEM50B-210ENST00000542230 BRD3OSQ6XYD6 125 aa13.68□□□□□ -0.22
TMEM50B-210ENST00000542230 ZNF114Q8NC26 417 aa13.68□□□□□ -0.22
TMEM50B-210ENST00000542230 OR1P1Q8NH06 330 aa13.68□□□□□ -0.22
TMEM50B-210ENST00000542230 MINOS1-NBL1R4GNA1 71 aa13.68□□□□□ -0.22
TMEM50B-210ENST00000542230 LOC105371267A0A1B0GV96 52 aa13.67□□□□□ -0.22
TMEM50B-210ENST00000542230 PSMB11A5LHX3 300 aa13.67□□□□□ -0.22
TMEM50B-210ENST00000542230 SH2D7A6NKC9 451 aaPredicted RBP13.67□□□□□ -0.22
TMEM50B-210ENST00000542230 CRYGCP07315 174 aa13.67□□□□□ -0.22
TMEM50B-210ENST00000542230 GCHFRP30047 84 aa13.67□□□□□ -0.22
TMEM50B-210ENST00000542230 CX3CL1P78423 397 aa13.67□□□□□ -0.22
TMEM50B-210ENST00000542230 PATE2Q6UY27 113 aa13.67□□□□□ -0.22
TMEM50B-210ENST00000542230 TVP23CQ96ET8 276 aa13.67□□□□□ -0.22
TMEM50B-210ENST00000542230 MANBALQ9NQG1 85 aa13.67□□□□□ -0.22
TMEM50B-210ENST00000542230 SMCO4Q9NRQ5 59 aa13.67□□□□□ -0.22
TMEM50B-210ENST00000542230 KCNIP2Q9NS61 270 aa13.67□□□□□ -0.22
TMEM50B-210ENST00000542230 CXorf1O96002 111 aa13.67□□□□□ -0.22
TMEM50B-210ENST00000542230 ASPHD1Q5U4P2 390 aa13.67□□□□□ -0.22
TMEM50B-210ENST00000542230 FUT9Q9Y231 359 aa13.67□□□□□ -0.22
TMEM50B-210ENST00000542230 OR10J4P0C629 311 aa13.66□□□□□ -0.22
TMEM50B-210ENST00000542230 TMEM11P17152 192 aa13.66□□□□□ -0.22
TMEM50B-210ENST00000542230 PAX8Q06710 450 aa13.66□□□□□ -0.22
TMEM50B-210ENST00000542230 CCDC144NLQ6NUI1 221 aa13.66□□□□□ -0.22
TMEM50B-210ENST00000542230 SMIM7Q9BQ49 75 aa13.66□□□□□ -0.22
TMEM50B-210ENST00000542230 PARLQ9H300 379 aa13.66□□□□□ -0.22
TMEM50B-210ENST00000542230 RHEBQ15382 184 aa13.66□□□□□ -0.22
TMEM50B-210ENST00000542230 AURKAIP1Q9NWT8 199 aaPredicted RBP13.66□□□□□ -0.22
TMEM50B-210ENST00000542230 MXRA5Q9NR99 2828 aa13.65□□□□□ -0.22
TMEM50B-210ENST00000542230 TEX15Q9BXT5 2789 aa13.65□□□□□ -0.22
TMEM50B-210ENST00000542230 TCRBV4S1A1TA0A5B7 111 aa13.65□□□□□ -0.22
TMEM50B-210ENST00000542230 NPFFO15130 113 aa13.65□□□□□ -0.22
TMEM50B-210ENST00000542230 COX6B1P14854 86 aa13.65□□□□□ -0.22
TMEM50B-210ENST00000542230 CTRB1P17538 263 aa13.65□□□□□ -0.22
TMEM50B-210ENST00000542230 CTRB2Q6GPI1 263 aa13.65□□□□□ -0.22
TMEM50B-210ENST00000542230 ZNF343Q6P1L6 599 aa13.65□□□□□ -0.22
TMEM50B-210ENST00000542230 FAM24BQ8N5W8 94 aa13.65□□□□□ -0.22
TMEM50B-210ENST00000542230 THAP8Q8NA92 274 aa13.65□□□□□ -0.22
TMEM50B-210ENST00000542230 MALSU1Q96EH3 234 aa13.65□□□□□ -0.22
TMEM50B-210ENST00000542230 SDF2L1Q9HCN8 221 aa13.65□□□□□ -0.22
TMEM50B-210ENST00000542230 TNFRSF19Q9NS68 423 aa13.65□□□□□ -0.22
TMEM50B-210ENST00000542230 GOSR1O95249 250 aa13.65□□□□□ -0.22
TMEM50B-210ENST00000542230 EBI3Q14213 229 aa13.65□□□□□ -0.22
TMEM50B-210ENST00000542230 TMEM249Q2WGJ8 235 aa13.65□□□□□ -0.22
TMEM50B-210ENST00000542230 MAPK1IP1LQ8NDC0 245 aa13.65□□□□□ -0.22
TMEM50B-210ENST00000542230 SSX3Q99909 188 aa13.65□□□□□ -0.22
TMEM50B-210ENST00000542230 I3L2K1 104 aa13.64□□□□□ -0.23
TMEM50B-210ENST00000542230 OR5G3P0C626 314 aa13.64□□□□□ -0.23
TMEM50B-210ENST00000542230 OR4X1Q8NH49 305 aa13.64□□□□□ -0.23
TMEM50B-210ENST00000542230 POLR3KQ9Y2Y1 108 aaPredicted RBP13.64□□□□□ -0.23
TMEM50B-210ENST00000542230 URGCP-MRPS24S4R325 110 aa13.64□□□□□ -0.23
TMEM50B-210ENST00000542230 TLN2Q9Y4G6 2542 aa13.64□□□□□ -0.23
TMEM50B-210ENST00000542230 CCDC168Q8NDH2 2452 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms