RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 HRH4Q9H3N8 390 aa11.16□□□□□ -0.62
CLSTN3-213ENST00000541953 FAM212BQ9NTI7 297 aaPredicted RBP11.16□□□□□ -0.62
CLSTN3-213ENST00000541953 TRAV2A0A0B4J234 112 aa11.15□□□□□ -0.62
CLSTN3-213ENST00000541953 P2RY1P47900 373 aa11.15□□□□□ -0.62
CLSTN3-213ENST00000541953 TCTAP57738 103 aa11.15□□□□□ -0.62
CLSTN3-213ENST00000541953 TSPAN5P62079 268 aa11.15□□□□□ -0.62
CLSTN3-213ENST00000541953 ERHP84090 104 aaKnown RBP11.15□□□□□ -0.62
CLSTN3-213ENST00000541953 SNX29P2Q8IUI4 249 aa11.15□□□□□ -0.62
CLSTN3-213ENST00000541953 DUSP18Q8NEJ0 188 aa11.15□□□□□ -0.62
CLSTN3-213ENST00000541953 YIPF6Q96EC8 236 aa11.15□□□□□ -0.62
CLSTN3-213ENST00000541953 C11orf94C9JXX5 98 aa11.14□□□□□ -0.63
CLSTN3-213ENST00000541953 IGKV1-17P01599 117 aa11.14□□□□□ -0.63
CLSTN3-213ENST00000541953 CRYBB3P26998 211 aa11.14□□□□□ -0.63
CLSTN3-213ENST00000541953 ETV6P41212 452 aa11.14□□□□□ -0.63
CLSTN3-213ENST00000541953 NPBWR1P48145 328 aa11.14□□□□□ -0.63
CLSTN3-213ENST00000541953 UCP3P55916 312 aa11.14□□□□□ -0.63
CLSTN3-213ENST00000541953 C12orf74Q32Q52 190 aa11.14□□□□□ -0.63
CLSTN3-213ENST00000541953 TIGITQ495A1 244 aa11.14□□□□□ -0.63
CLSTN3-213ENST00000541953 RNASE12Q5GAN4 147 aaKnown RBP11.14□□□□□ -0.63
CLSTN3-213ENST00000541953 LRP1BQ9NZR2 4599 aa11.14□□□□□ -0.63
CLSTN3-213ENST00000541953 RTL8CO15255 209 aa11.13□□□□□ -0.63
CLSTN3-213ENST00000541953 MIFP14174 115 aa11.13□□□□□ -0.63
CLSTN3-213ENST00000541953 ACTL10Q5JWF8 245 aa11.13□□□□□ -0.63
CLSTN3-213ENST00000541953 SLC35G3Q8N808 338 aa11.13□□□□□ -0.63
CLSTN3-213ENST00000541953 TRAV10A0A0B4J240 114 aa11.12□□□□□ -0.63
CLSTN3-213ENST00000541953 INS-IGF2F8WCM5 200 aa11.12□□□□□ -0.63
CLSTN3-213ENST00000541953 TMEM127O75204 238 aa11.12□□□□□ -0.63
CLSTN3-213ENST00000541953 CLN5O75503 358 aa11.12□□□□□ -0.63
CLSTN3-213ENST00000541953 CD5P06127 495 aa11.12□□□□□ -0.63
CLSTN3-213ENST00000541953 NPPCP23582 126 aa11.12□□□□□ -0.63
CLSTN3-213ENST00000541953 SP6Q3SY56 376 aa11.12□□□□□ -0.63
CLSTN3-213ENST00000541953 GSG1LQ6UXU4 331 aa11.12□□□□□ -0.63
CLSTN3-213ENST00000541953 Q6ZRM9 215 aa11.12□□□□□ -0.63
CLSTN3-213ENST00000541953 LHFPL1Q86WI0 220 aa11.12□□□□□ -0.63
CLSTN3-213ENST00000541953 GRAMD2BQ96HH9 432 aa11.12□□□□□ -0.63
CLSTN3-213ENST00000541953 COMMD3Q9UBI1 195 aa11.12□□□□□ -0.63
CLSTN3-213ENST00000541953 M0R2N4 97 aa11.11□□□□□ -0.63
CLSTN3-213ENST00000541953 IFNA17P01571 189 aa11.11□□□□□ -0.63
CLSTN3-213ENST00000541953 AMBPP02760 352 aa11.11□□□□□ -0.63
CLSTN3-213ENST00000541953 SPP1P10451 314 aa11.11□□□□□ -0.63
CLSTN3-213ENST00000541953 ELK1P19419 428 aa11.11□□□□□ -0.63
CLSTN3-213ENST00000541953 SNCAP37840 140 aa11.11□□□□□ -0.63
CLSTN3-213ENST00000541953 OPRK1P41145 380 aa11.11□□□□□ -0.63
CLSTN3-213ENST00000541953 HOXA1P49639 335 aaPredicted RBP11.11□□□□□ -0.63
CLSTN3-213ENST00000541953 AKR1C2P52895 323 aa11.11□□□□□ -0.63
CLSTN3-213ENST00000541953 PIGPP57054 158 aa11.11□□□□□ -0.63
CLSTN3-213ENST00000541953 DEFB1P60022 68 aa11.11□□□□□ -0.63
CLSTN3-213ENST00000541953 RND3P61587 244 aa11.11□□□□□ -0.63
CLSTN3-213ENST00000541953 NCS1P62166 190 aa11.11□□□□□ -0.63
CLSTN3-213ENST00000541953 BSXQ3C1V8 233 aa11.11□□□□□ -0.63
CLSTN3-213ENST00000541953 KCTD21Q4G0X4 260 aa11.11□□□□□ -0.63
CLSTN3-213ENST00000541953 LPCAT3Q6P1A2 487 aa11.11□□□□□ -0.63
CLSTN3-213ENST00000541953 CROCCP3Q8IVE0 287 aa11.11□□□□□ -0.63
CLSTN3-213ENST00000541953 OR4D10Q8NGI6 311 aa11.11□□□□□ -0.63
CLSTN3-213ENST00000541953 OR4X1Q8NH49 305 aa11.11□□□□□ -0.63
CLSTN3-213ENST00000541953 GLMPQ8WWB7 406 aa11.11□□□□□ -0.63
CLSTN3-213ENST00000541953 METTL26Q96S19 204 aa11.11□□□□□ -0.63
CLSTN3-213ENST00000541953 Q9H521 79 aa11.11□□□□□ -0.63
CLSTN3-213ENST00000541953 TBC1D24Q9ULP9 559 aa11.11□□□□□ -0.63
CLSTN3-213ENST00000541953 U3KQE9 123 aa11.11□□□□□ -0.63
CLSTN3-213ENST00000541953 HPGDSO60760 199 aa11.1□□□□□ -0.63
CLSTN3-213ENST00000541953 PGAM2P15259 253 aa11.1□□□□□ -0.63
CLSTN3-213ENST00000541953 RCVRNP35243 200 aa11.1□□□□□ -0.63
CLSTN3-213ENST00000541953 PSMG4Q5JS54 123 aa11.1□□□□□ -0.63
CLSTN3-213ENST00000541953 MORN3Q6PF18 240 aaPredicted RBP11.1□□□□□ -0.63
CLSTN3-213ENST00000541953 TMEM170AQ8WVE7 144 aa11.1□□□□□ -0.63
CLSTN3-213ENST00000541953 RAB40CQ96S21 281 aa11.1□□□□□ -0.63
CLSTN3-213ENST00000541953 RNF126Q9BV68 326 aa11.1□□□□□ -0.63
CLSTN3-213ENST00000541953 KRTAP4-5Q9BYR2 181 aa11.1□□□□□ -0.63
CLSTN3-213ENST00000541953 TMEM231Q9H6L2 316 aa11.1□□□□□ -0.63
CLSTN3-213ENST00000541953 SCPEP1Q9HB40 452 aa11.1□□□□□ -0.63
CLSTN3-213ENST00000541953 DEFB131BA0A096LNP1 70 aa11.09□□□□□ -0.63
CLSTN3-213ENST00000541953 S100GP29377 79 aa11.09□□□□□ -0.63
CLSTN3-213ENST00000541953 USF2Q15853 346 aaPredicted RBP11.09□□□□□ -0.63
CLSTN3-213ENST00000541953 LHFPL5Q8TAF8 219 aa11.09□□□□□ -0.63
CLSTN3-213ENST00000541953 KLK11Q9UBX7 282 aa11.09□□□□□ -0.63
CLSTN3-213ENST00000541953 MUC4Q99102 2169 aa11.09□□□□□ -0.63
CLSTN3-213ENST00000541953 C3orf85A0A1B0GTC6 90 aa11.08□□□□□ -0.64
CLSTN3-213ENST00000541953 A0A1W2PS18 150 aa11.08□□□□□ -0.64
CLSTN3-213ENST00000541953 NXPH3O95157 252 aa11.08□□□□□ -0.64
CLSTN3-213ENST00000541953 APOA1P02647 267 aa11.08□□□□□ -0.64
CLSTN3-213ENST00000541953 CD3DP04234 171 aa11.08□□□□□ -0.64
CLSTN3-213ENST00000541953 IGLC1P0CG04 106 aa11.08□□□□□ -0.64
CLSTN3-213ENST00000541953 DHRS2Q13268 280 aa11.08□□□□□ -0.64
CLSTN3-213ENST00000541953 GDF5OSQ5U4N7 250 aa11.08□□□□□ -0.64
CLSTN3-213ENST00000541953 C16orf54Q6UWD8 224 aa11.08□□□□□ -0.64
CLSTN3-213ENST00000541953 LINC00336Q6ZUF6 198 aa11.08□□□□□ -0.64
CLSTN3-213ENST00000541953 TMEM230Q96A57 120 aa11.08□□□□□ -0.64
CLSTN3-213ENST00000541953 XCL2Q9UBD3 114 aa11.08□□□□□ -0.64
CLSTN3-213ENST00000541953 APOBP04114 4563 aaKnown RBP11.08□□□□□ -0.64
CLSTN3-213ENST00000541953 HELTA6NFD8 242 aa11.07□□□□□ -0.64
CLSTN3-213ENST00000541953 PRSS29PA6NIE9 313 aa11.07□□□□□ -0.64
CLSTN3-213ENST00000541953 RND2P52198 227 aa11.07□□□□□ -0.64
CLSTN3-213ENST00000541953 VBP1P61758 197 aa11.07□□□□□ -0.64
CLSTN3-213ENST00000541953 TMEM41BQ5BJD5 291 aa11.07□□□□□ -0.64
CLSTN3-213ENST00000541953 PRSS54Q6PEW0 395 aa11.07□□□□□ -0.64
CLSTN3-213ENST00000541953 POM121L12Q8N7R1 296 aa11.07□□□□□ -0.64
CLSTN3-213ENST00000541953 OR52I2Q8NH67 350 aa11.07□□□□□ -0.64
CLSTN3-213ENST00000541953 FAM90A26D6RGX4 464 aa11.06□□□□□ -0.64
CLSTN3-213ENST00000541953 CORTO00230 105 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms