RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 AMY1AP04745 511 aa21.86■■□□□ 1.09
CCM2-218ENST00000541586 BLCAPP62952 87 aa21.86■■□□□ 1.09
CCM2-218ENST00000541586 BLOC1S1P78537 153 aa21.86■■□□□ 1.09
CCM2-218ENST00000541586 PXDC1Q5TGL8 231 aa21.86■■□□□ 1.09
CCM2-218ENST00000541586 C16orf82Q7Z2V1 217 aa21.86■■□□□ 1.09
CCM2-218ENST00000541586 ZNF709Q8N972 641 aa21.86■■□□□ 1.09
CCM2-218ENST00000541586 MGST2Q99735 147 aa21.86■■□□□ 1.09
CCM2-218ENST00000541586 CAMLGP49069 296 aa21.85■■□□□ 1.09
CCM2-218ENST00000541586 TEPPQ6URK8 271 aa21.85■■□□□ 1.09
CCM2-218ENST00000541586 COMMD7Q86VX2 200 aa21.85■■□□□ 1.09
CCM2-218ENST00000541586 PARP11Q9NR21 331 aa21.85■■□□□ 1.09
CCM2-218ENST00000541586 MED9Q9NWA0 146 aa21.85■■□□□ 1.09
CCM2-218ENST00000541586 C17orf112F2Z3M2 114 aa21.84■■□□□ 1.09
CCM2-218ENST00000541586 TMEM144Q7Z5S9 345 aa21.84■■□□□ 1.09
CCM2-218ENST00000541586 OR2T6Q8NHC8 308 aa21.84■■□□□ 1.09
CCM2-218ENST00000541586 FAM213BQ8TBF2 198 aa21.84■■□□□ 1.09
CCM2-218ENST00000541586 CORTO00230 105 aa21.83■■□□□ 1.09
CCM2-218ENST00000541586 CRYGCP07315 174 aa21.83■■□□□ 1.09
CCM2-218ENST00000541586 DEFA4P12838 97 aa21.83■■□□□ 1.09
CCM2-218ENST00000541586 C9orf152Q5JTZ5 239 aa21.83■■□□□ 1.09
CCM2-218ENST00000541586 LFNGQ8NES3 379 aa21.83■■□□□ 1.09
CCM2-218ENST00000541586 SLC35E1Q96K37 410 aa21.83■■□□□ 1.09
CCM2-218ENST00000541586 VSIRQ9H7M9 311 aa21.83■■□□□ 1.09
CCM2-218ENST00000541586 PFDN2Q9UHV9 154 aa21.83■■□□□ 1.09
CCM2-218ENST00000541586 NPIPB5A8MRT5 1133 aa21.83■■□□□ 1.08
CCM2-218ENST00000541586 ELLP55199 621 aaPredicted RBP21.83■■□□□ 1.08
CCM2-218ENST00000541586 TTC9CQ8N5M4 171 aa21.83■■□□□ 1.08
CCM2-218ENST00000541586 IGHV3-48P01763 117 aa21.82■■□□□ 1.08
CCM2-218ENST00000541586 ZNF616Q08AN1 781 aa21.82■■□□□ 1.08
CCM2-218ENST00000541586 ACSM6Q6P461 480 aa21.82■■□□□ 1.08
CCM2-218ENST00000541586 SGMS2Q8NHU3 365 aa21.82■■□□□ 1.08
CCM2-218ENST00000541586 GGTLC1Q9BX51 225 aa21.82■■□□□ 1.08
CCM2-218ENST00000541586 NPFFR1Q9GZQ6 430 aa21.82■■□□□ 1.08
CCM2-218ENST00000541586 IGKV1OR2-108A0A075B7D4 117 aa21.81■■□□□ 1.08
CCM2-218ENST00000541586 M0QZK8 103 aa21.81■■□□□ 1.08
CCM2-218ENST00000541586 ATP6V0E1O15342 81 aa21.81■■□□□ 1.08
CCM2-218ENST00000541586 ACY3Q96HD9 319 aa21.81■■□□□ 1.08
CCM2-218ENST00000541586 HRH4Q9H3N8 390 aa21.81■■□□□ 1.08
CCM2-218ENST00000541586 RPRMQ9NS64 109 aa21.81■■□□□ 1.08
CCM2-218ENST00000541586 LINC01548A6NM66 108 aa21.8■■□□□ 1.08
CCM2-218ENST00000541586 AGPAT2O15120 278 aa21.8■■□□□ 1.08
CCM2-218ENST00000541586 FFAR4Q5NUL3 377 aa21.8■■□□□ 1.08
CCM2-218ENST00000541586 ETFRF1Q6IPR1 90 aa21.8■■□□□ 1.08
CCM2-218ENST00000541586 DPPA3Q6W0C5 159 aa21.8■■□□□ 1.08
CCM2-218ENST00000541586 Q6ZS46 218 aa21.8■■□□□ 1.08
CCM2-218ENST00000541586 OR1L6Q8NGR2 347 aa21.8■■□□□ 1.08
CCM2-218ENST00000541586 RAB31Q13636 194 aa21.8■■□□□ 1.08
CCM2-218ENST00000541586 TMEM41BQ5BJD5 291 aa21.8■■□□□ 1.08
CCM2-218ENST00000541586 CITED4Q96RK1 184 aa21.8■■□□□ 1.08
CCM2-218ENST00000541586 MRPL36Q9P0J6 103 aaKnown RBP21.8■■□□□ 1.08
CCM2-218ENST00000541586 C2CD3Q4AC94 2353 aa21.8■■□□□ 1.08
CCM2-218ENST00000541586 MT-CO2P00403 227 aa21.79■■□□□ 1.08
CCM2-218ENST00000541586 LYPD6BQ8NI32 183 aa21.79■■□□□ 1.08
CCM2-218ENST00000541586 IGHV3-21A0A0B4J1V1 117 aa21.78■■□□□ 1.08
CCM2-218ENST00000541586 NPIPB3Q92617 1050 aa21.78■■□□□ 1.08
CCM2-218ENST00000541586 RAB2AP61019 212 aa21.77■■□□□ 1.08
CCM2-218ENST00000541586 RPL15P61313 204 aaKnown RBP21.77■■□□□ 1.08
CCM2-218ENST00000541586 MIC13Q5XKP0 118 aa21.77■■□□□ 1.08
CCM2-218ENST00000541586 Q6ZSV7 163 aa21.77■■□□□ 1.08
CCM2-218ENST00000541586 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP21.77■■□□□ 1.08
CCM2-218ENST00000541586 OR5T1Q8NG75 326 aa21.77■■□□□ 1.08
CCM2-218ENST00000541586 PRSS22Q9GZN4 317 aa21.77■■□□□ 1.08
CCM2-218ENST00000541586 PXMP4Q9Y6I8 212 aa21.77■■□□□ 1.08
CCM2-218ENST00000541586 I3L2K1 104 aa21.77■■□□□ 1.08
CCM2-218ENST00000541586 RND2P52198 227 aa21.77■■□□□ 1.08
CCM2-218ENST00000541586 ECSCRQ19T08 205 aa21.77■■□□□ 1.08
CCM2-218ENST00000541586 UNQ5815/PRO19632Q6UWF5 114 aa21.77■■□□□ 1.08
CCM2-218ENST00000541586 FANCD2OSQ96PS1 177 aa21.77■■□□□ 1.08
CCM2-218ENST00000541586 MFSD2BA6NFX1 497 aa21.76■■□□□ 1.07
CCM2-218ENST00000541586 MBP02144 154 aa21.76■■□□□ 1.07
CCM2-218ENST00000541586 KCNIP2Q9NS61 270 aa21.76■■□□□ 1.07
CCM2-218ENST00000541586 IGLV11-55A0A075B6I3 123 aa21.75■■□□□ 1.07
CCM2-218ENST00000541586 OR10J1P30954 320 aa21.75■■□□□ 1.07
CCM2-218ENST00000541586 RPL29P47914 159 aaKnown RBP21.75■■□□□ 1.07
CCM2-218ENST00000541586 SLC45A2Q9UMX9 530 aa21.75■■□□□ 1.07
CCM2-218ENST00000541586 K7EIM0 57 aa21.75■■□□□ 1.07
CCM2-218ENST00000541586 SOX15O60248 233 aa21.75■■□□□ 1.07
CCM2-218ENST00000541586 TSPAN15O95858 294 aa21.75■■□□□ 1.07
CCM2-218ENST00000541586 H2AFB1P0C5Y9 115 aa21.75■■□□□ 1.07
CCM2-218ENST00000541586 KRTAP24-1Q3LI83 254 aa21.75■■□□□ 1.07
CCM2-218ENST00000541586 AKIRIN2Q53H80 203 aa21.75■■□□□ 1.07
CCM2-218ENST00000541586 RPP25LQ8N5L8 163 aaKnown RBP21.75■■□□□ 1.07
CCM2-218ENST00000541586 STPG3Q8N7X2 389 aa21.75■■□□□ 1.07
CCM2-218ENST00000541586 TMEM116Q8NCL8 245 aa21.75■■□□□ 1.07
CCM2-218ENST00000541586 FAM110DQ8TAY7 271 aaPredicted RBP21.75■■□□□ 1.07
CCM2-218ENST00000541586 MARC2Q969Z3 335 aa21.75■■□□□ 1.07
CCM2-218ENST00000541586 ZNF702PQ9H963 129 aa21.75■■□□□ 1.07
CCM2-218ENST00000541586 YIF1AO95070 293 aa21.74■■□□□ 1.07
CCM2-218ENST00000541586 M6PRP20645 277 aa21.74■■□□□ 1.07
CCM2-218ENST00000541586 B2MP61769 119 aa21.74■■□□□ 1.07
CCM2-218ENST00000541586 ZNF726P1Q15940 193 aa21.74■■□□□ 1.07
CCM2-218ENST00000541586 THAP8Q8NA92 274 aa21.74■■□□□ 1.07
CCM2-218ENST00000541586 OR10G4Q8NGN3 311 aa21.74■■□□□ 1.07
CCM2-218ENST00000541586 OR10G9Q8NGN4 311 aa21.74■■□□□ 1.07
CCM2-218ENST00000541586 OR10G7Q8NGN6 311 aa21.74■■□□□ 1.07
CCM2-218ENST00000541586 RCC1LQ96I51 464 aaKnown RBP21.74■■□□□ 1.07
CCM2-218ENST00000541586 TMEM68Q96MH6 324 aa21.74■■□□□ 1.07
CCM2-218ENST00000541586 G3V318 75 aa21.73■■□□□ 1.07
CCM2-218ENST00000541586 TSPAN9O75954 239 aa21.73■■□□□ 1.07
CCM2-218ENST00000541586 PRR20EP86478 221 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms