RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 MBD3L1Q8WWY6 194 aa7.58□□□□□ -1.2
PAAF1-209ENST00000540659 RASL11BQ9BPW5 248 aa7.58□□□□□ -1.2
PAAF1-209ENST00000540659 SLC25A33Q9BSK2 321 aa7.58□□□□□ -1.2
PAAF1-209ENST00000540659 WNT10AQ9GZT5 417 aa7.58□□□□□ -1.2
PAAF1-209ENST00000540659 FNDC4Q9H6D8 234 aaPredicted RBP7.58□□□□□ -1.2
PAAF1-209ENST00000540659 GNG13Q9P2W3 67 aa7.58□□□□□ -1.2
PAAF1-209ENST00000540659 LSM4Q9Y4Z0 139 aaKnown RBP7.58□□□□□ -1.2
PAAF1-209ENST00000540659 F11RQ9Y624 299 aaKnown RBP7.58□□□□□ -1.2
PAAF1-209ENST00000540659 IGKV1OR2-108A0A075B7D4 117 aa7.57□□□□□ -1.2
PAAF1-209ENST00000540659 A0A096LNT2 108 aa7.57□□□□□ -1.2
PAAF1-209ENST00000540659 BTBD17A6NE02 478 aa7.57□□□□□ -1.2
PAAF1-209ENST00000540659 M0QZK8 103 aa7.57□□□□□ -1.2
PAAF1-209ENST00000540659 SOX15O60248 233 aa7.57□□□□□ -1.2
PAAF1-209ENST00000540659 YIF1AO95070 293 aa7.57□□□□□ -1.2
PAAF1-209ENST00000540659 TGFAP01135 160 aa7.57□□□□□ -1.2
PAAF1-209ENST00000540659 AVPP01185 164 aa7.57□□□□□ -1.2
PAAF1-209ENST00000540659 CD5P06127 495 aa7.57□□□□□ -1.2
PAAF1-209ENST00000540659 FBP1P09467 338 aa7.57□□□□□ -1.2
PAAF1-209ENST00000540659 CEBPGP53567 150 aa7.57□□□□□ -1.2
PAAF1-209ENST00000540659 LY6EQ16553 131 aa7.57□□□□□ -1.2
PAAF1-209ENST00000540659 TMEM219Q86XT9 240 aa7.57□□□□□ -1.2
PAAF1-209ENST00000540659 ZNF114Q8NC26 417 aa7.57□□□□□ -1.2
PAAF1-209ENST00000540659 OR1L6Q8NGR2 347 aa7.57□□□□□ -1.2
PAAF1-209ENST00000540659 NANPQ8TBE9 248 aa7.57□□□□□ -1.2
PAAF1-209ENST00000540659 NPIPB3Q92617 1050 aa7.57□□□□□ -1.2
PAAF1-209ENST00000540659 ARPC1AQ92747 370 aa7.57□□□□□ -1.2
PAAF1-209ENST00000540659 SRSF8Q9BRL6 282 aaKnown RBP7.57□□□□□ -1.2
PAAF1-209ENST00000540659 TMUB1Q9BVT8 246 aa7.57□□□□□ -1.2
PAAF1-209ENST00000540659 TMPRSS5Q9H3S3 457 aa7.57□□□□□ -1.2
PAAF1-209ENST00000540659 KCNIP2Q9NS61 270 aa7.57□□□□□ -1.2
PAAF1-209ENST00000540659 MRPL36Q9P0J6 103 aaKnown RBP7.57□□□□□ -1.2
PAAF1-209ENST00000540659 CR1P17927 2039 aa7.57□□□□□ -1.2
PAAF1-209ENST00000540659 TLN2Q9Y4G6 2542 aa7.56□□□□□ -1.2
PAAF1-209ENST00000540659 LOC102723971A0A1B0GUV8 181 aa7.56□□□□□ -1.2
PAAF1-209ENST00000540659 MDFIC2A0A1B0GVS7 189 aa7.56□□□□□ -1.2
PAAF1-209ENST00000540659 MT-CO2P00403 227 aa7.56□□□□□ -1.2
PAAF1-209ENST00000540659 IGHV4-31P0DP07 118 aa7.56□□□□□ -1.2
PAAF1-209ENST00000540659 HNF1AP20823 631 aa7.56□□□□□ -1.2
PAAF1-209ENST00000540659 RPL29P47914 159 aaKnown RBP7.56□□□□□ -1.2
PAAF1-209ENST00000540659 RND2P52198 227 aa7.56□□□□□ -1.2
PAAF1-209ENST00000540659 CX3CL1P78423 397 aa7.56□□□□□ -1.2
PAAF1-209ENST00000540659 NDPQ00604 133 aa7.56□□□□□ -1.2
PAAF1-209ENST00000540659 ICAM4Q14773 271 aa7.56□□□□□ -1.2
PAAF1-209ENST00000540659 KLF17Q5JT82 389 aaPredicted RBP7.56□□□□□ -1.2
PAAF1-209ENST00000540659 ETFRF1Q6IPR1 90 aa7.56□□□□□ -1.2
PAAF1-209ENST00000540659 CYP2G1PQ6ZSU1 146 aa7.56□□□□□ -1.2
PAAF1-209ENST00000540659 OR1P1Q8NH06 330 aa7.56□□□□□ -1.2
PAAF1-209ENST00000540659 CACNG8Q8WXS5 425 aa7.56□□□□□ -1.2
PAAF1-209ENST00000540659 RAB24Q969Q5 203 aa7.56□□□□□ -1.2
PAAF1-209ENST00000540659 SSX3Q99909 188 aa7.56□□□□□ -1.2
PAAF1-209ENST00000540659 HSPB9Q9BQS6 159 aa7.56□□□□□ -1.2
PAAF1-209ENST00000540659 SCRT1Q9BWW7 348 aa7.56□□□□□ -1.2
PAAF1-209ENST00000540659 DMRT1Q9Y5R6 373 aa7.56□□□□□ -1.2
PAAF1-209ENST00000540659 ABCA2Q9BZC7 2435 aa7.56□□□□□ -1.2
PAAF1-209ENST00000540659 IGHV7-81A0A0B4J1V7 117 aa7.55□□□□□ -1.2
PAAF1-209ENST00000540659 H3BUX3 64 aa7.55□□□□□ -1.2
PAAF1-209ENST00000540659 CORTO00230 105 aa7.55□□□□□ -1.2
PAAF1-209ENST00000540659 IFNA1P01562 189 aa7.55□□□□□ -1.2
PAAF1-209ENST00000540659 LINC00869P0C866 280 aa7.55□□□□□ -1.2
PAAF1-209ENST00000540659 CD99P14209 185 aa7.55□□□□□ -1.2
PAAF1-209ENST00000540659 CTRB1P17538 263 aa7.55□□□□□ -1.2
PAAF1-209ENST00000540659 PRR20EP86478 221 aa7.55□□□□□ -1.2
PAAF1-209ENST00000540659 PRR20CP86479 221 aa7.55□□□□□ -1.2
PAAF1-209ENST00000540659 PRR20DP86480 221 aa7.55□□□□□ -1.2
PAAF1-209ENST00000540659 PRR20BP86481 221 aa7.55□□□□□ -1.2
PAAF1-209ENST00000540659 PRR20AP86496 221 aa7.55□□□□□ -1.2
PAAF1-209ENST00000540659 ZNF90Q03938 601 aa7.55□□□□□ -1.2
PAAF1-209ENST00000540659 GUCA2BQ16661 112 aa7.55□□□□□ -1.2
PAAF1-209ENST00000540659 ECSCRQ19T08 205 aa7.55□□□□□ -1.2
PAAF1-209ENST00000540659 AKIRIN2Q53H80 203 aa7.55□□□□□ -1.2
PAAF1-209ENST00000540659 C9orf152Q5JTZ5 239 aa7.55□□□□□ -1.2
PAAF1-209ENST00000540659 ZNF506Q5JVG8 444 aa7.55□□□□□ -1.2
PAAF1-209ENST00000540659 ASPHD1Q5U4P2 390 aa7.55□□□□□ -1.2
PAAF1-209ENST00000540659 SPATA31B1PQ5VZV4 182 aa7.55□□□□□ -1.2
PAAF1-209ENST00000540659 CTRB2Q6GPI1 263 aa7.55□□□□□ -1.2
PAAF1-209ENST00000540659 ZNF562Q6V9R5 426 aa7.55□□□□□ -1.2
PAAF1-209ENST00000540659 C16orf82Q7Z2V1 217 aa7.55□□□□□ -1.2
PAAF1-209ENST00000540659 OR5T1Q8NG75 326 aa7.55□□□□□ -1.2
PAAF1-209ENST00000540659 GATAD1Q8WUU5 269 aa7.55□□□□□ -1.2
PAAF1-209ENST00000540659 C22orf15Q8WYQ4 148 aa7.55□□□□□ -1.2
PAAF1-209ENST00000540659 SEC11CQ9BY50 192 aa7.55□□□□□ -1.2
PAAF1-209ENST00000540659 GSX1Q9H4S2 264 aaPredicted RBP7.55□□□□□ -1.2
PAAF1-209ENST00000540659 DOK5Q9P104 306 aa7.55□□□□□ -1.2
PAAF1-209ENST00000540659 SLC45A2Q9UMX9 530 aa7.55□□□□□ -1.2
PAAF1-209ENST00000540659 S4R3C0 116 aa7.55□□□□□ -1.2
PAAF1-209ENST00000540659 CSPG4Q6UVK1 2322 aa7.54□□□□□ -1.2
PAAF1-209ENST00000540659 IGKV1D-37A0A075B6S9 117 aa7.54□□□□□ -1.2
PAAF1-209ENST00000540659 TRAV1-1A0A0B4J248 108 aa7.54□□□□□ -1.2
PAAF1-209ENST00000540659 TCRBV4S1A1TA0A5B7 111 aa7.54□□□□□ -1.2
PAAF1-209ENST00000540659 SCGB2A1O75556 95 aa7.54□□□□□ -1.2
PAAF1-209ENST00000540659 HLA-DRB1P01911 266 aa7.54□□□□□ -1.2
PAAF1-209ENST00000540659 SRP19P09132 144 aaKnown RBP7.54□□□□□ -1.2
PAAF1-209ENST00000540659 RHOBP62745 196 aa7.54□□□□□ -1.2
PAAF1-209ENST00000540659 TMEM249Q2WGJ8 235 aa7.54□□□□□ -1.2
PAAF1-209ENST00000540659 FAM78BQ5VT40 261 aa7.54□□□□□ -1.2
PAAF1-209ENST00000540659 PVRIGQ6DKI7 326 aa7.54□□□□□ -1.2
PAAF1-209ENST00000540659 ATRAIDQ6UW56 229 aa7.54□□□□□ -1.2
PAAF1-209ENST00000540659 MIR17HGQ75NE6 70 aa7.54□□□□□ -1.2
PAAF1-209ENST00000540659 CIARTQ8N365 385 aaPredicted RBP7.54□□□□□ -1.2
PAAF1-209ENST00000540659 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms