RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 POLDIP2Q9Y2S7 368 aa9.19□□□□□ -0.94
PBX1-212ENST00000540236 HEATR5BQ9P2D3 2071 aa9.18□□□□□ -0.94
PBX1-212ENST00000540236 TRAV12-3A0A0B4J271 114 aa9.18□□□□□ -0.94
PBX1-212ENST00000540236 NPC2P61916 151 aa9.18□□□□□ -0.94
PBX1-212ENST00000540236 MLANAQ16655 118 aa9.18□□□□□ -0.94
PBX1-212ENST00000540236 TBC1D28Q2M2D7 210 aa9.18□□□□□ -0.94
PBX1-212ENST00000540236 LINC00305Q7Z4B0 112 aa9.18□□□□□ -0.94
PBX1-212ENST00000540236 YPEL1O60688 119 aa9.18□□□□□ -0.94
PBX1-212ENST00000540236 MGPP08493 103 aa9.18□□□□□ -0.94
PBX1-212ENST00000540236 CFHR2P36980 270 aa9.18□□□□□ -0.94
PBX1-212ENST00000540236 NEU4Q8WWR8 484 aaPredicted RBP9.18□□□□□ -0.94
PBX1-212ENST00000540236 YPEL2Q96QA6 119 aa9.18□□□□□ -0.94
PBX1-212ENST00000540236 OSTCQ9NRP0 149 aa9.18□□□□□ -0.94
PBX1-212ENST00000540236 POLR2AP24928 1970 aaKnown RBP9.18□□□□□ -0.94
PBX1-212ENST00000540236 NUP210LQ5VU65 1888 aa9.18□□□□□ -0.94
PBX1-212ENST00000540236 CHCHD1Q96BP2 118 aaKnown RBP9.18□□□□□ -0.94
PBX1-212ENST00000540236 KIR2DL4Q99706 377 aa9.18□□□□□ -0.94
PBX1-212ENST00000540236 PLA2G2FQ9BZM2 168 aa9.18□□□□□ -0.94
PBX1-212ENST00000540236 D6R8Y8 96 aa9.18□□□□□ -0.94
PBX1-212ENST00000540236 M0R3E3 92 aa9.18□□□□□ -0.94
PBX1-212ENST00000540236 SPACA3Q8IXA5 215 aa9.18□□□□□ -0.94
PBX1-212ENST00000540236 ZBTB34Q8NCN2 500 aa9.18□□□□□ -0.94
PBX1-212ENST00000540236 OSR1Q8TAX0 266 aaPredicted RBP9.18□□□□□ -0.94
PBX1-212ENST00000540236 PTH2Q96A98 100 aa9.18□□□□□ -0.94
PBX1-212ENST00000540236 SPAG8Q99932 426 aaPredicted RBP9.18□□□□□ -0.94
PBX1-212ENST00000540236 H0YJW9 148 aa9.18□□□□□ -0.94
PBX1-212ENST00000540236 IGHV4-34P06331 123 aa9.18□□□□□ -0.94
PBX1-212ENST00000540236 CIARTQ8N365 385 aaPredicted RBP9.18□□□□□ -0.94
PBX1-212ENST00000540236 RAX2Q96IS3 184 aa9.18□□□□□ -0.94
PBX1-212ENST00000540236 SLC25A33Q9BSK2 321 aa9.18□□□□□ -0.94
PBX1-212ENST00000540236 EDA2RQ9HAV5 297 aa9.18□□□□□ -0.94
PBX1-212ENST00000540236 COL9A1P20849 921 aa9.17□□□□□ -0.94
PBX1-212ENST00000540236 CD27P26842 260 aa9.17□□□□□ -0.94
PBX1-212ENST00000540236 INSL3P51460 131 aa9.17□□□□□ -0.94
PBX1-212ENST00000540236 KLF13Q9Y2Y9 288 aaPredicted RBP9.17□□□□□ -0.94
PBX1-212ENST00000540236 OOEPA6NGQ2 149 aa9.17□□□□□ -0.94
PBX1-212ENST00000540236 ERVK11-1P61568 191 aa9.17□□□□□ -0.94
PBX1-212ENST00000540236 S4R3C0 116 aa9.17□□□□□ -0.94
PBX1-212ENST00000540236 DOCK9Q9BZ29 2069 aa9.17□□□□□ -0.94
PBX1-212ENST00000540236 AGFG2O95081 481 aa9.17□□□□□ -0.94
PBX1-212ENST00000540236 C8orf88P0DMB2 117 aa9.17□□□□□ -0.94
PBX1-212ENST00000540236 COQ2Q96H96 371 aa9.17□□□□□ -0.94
PBX1-212ENST00000540236 CENPFP49454 3210 aa9.17□□□□□ -0.94
PBX1-212ENST00000540236 C8orf86Q6ZUL3 223 aa9.17□□□□□ -0.94
PBX1-212ENST00000540236 C1QTNF4Q9BXJ3 329 aa9.17□□□□□ -0.94
PBX1-212ENST00000540236 MRPL27Q9P0M9 148 aaKnown RBP9.17□□□□□ -0.94
PBX1-212ENST00000540236 IGHV3-64A0A075B6Q5 118 aa9.17□□□□□ -0.94
PBX1-212ENST00000540236 DNPH1O43598 174 aa9.17□□□□□ -0.94
PBX1-212ENST00000540236 IGKV1-39P01597 117 aa9.17□□□□□ -0.94
PBX1-212ENST00000540236 IGKV1D-39P04432 117 aa9.17□□□□□ -0.94
PBX1-212ENST00000540236 GATA3P23771 443 aa9.17□□□□□ -0.94
PBX1-212ENST00000540236 KIR2DL1P43626 348 aaPredicted RBP9.17□□□□□ -0.94
PBX1-212ENST00000540236 SRXN1Q9BYN0 137 aa9.17□□□□□ -0.94
PBX1-212ENST00000540236 DKK2Q9UBU2 259 aa9.17□□□□□ -0.94
PBX1-212ENST00000540236 HEATR1Q9H583 2144 aaKnown RBP9.17□□□□□ -0.94
PBX1-212ENST00000540236 CEACAM18A8MTB9 384 aa9.16□□□□□ -0.94
PBX1-212ENST00000540236 IFITM1P13164 125 aa9.16□□□□□ -0.94
PBX1-212ENST00000540236 ZNF56Q15929 161 aa9.16□□□□□ -0.94
PBX1-212ENST00000540236 C2orf83Q53S99 150 aa9.16□□□□□ -0.94
PBX1-212ENST00000540236 MOB3BQ86TA1 216 aa9.16□□□□□ -0.94
PBX1-212ENST00000540236 ZNF441Q8N8Z8 693 aa9.16□□□□□ -0.94
PBX1-212ENST00000540236 COL4A3Q01955 1670 aa9.16□□□□□ -0.94
PBX1-212ENST00000540236 TRBV7-9A0A0J9YWB2 115 aa9.16□□□□□ -0.94
PBX1-212ENST00000540236 COL16A1Q07092 1604 aaPredicted RBP9.16□□□□□ -0.94
PBX1-212ENST00000540236 OR10X1Q8NGY0 326 aa9.16□□□□□ -0.94
PBX1-212ENST00000540236 IGKV1-6A0A0C4DH72 117 aa9.16□□□□□ -0.94
PBX1-212ENST00000540236 TNFSF14O43557 240 aa9.16□□□□□ -0.94
PBX1-212ENST00000540236 ANAPC10Q9UM13 185 aa9.16□□□□□ -0.94
PBX1-212ENST00000540236 IGKCP01834 107 aa9.16□□□□□ -0.94
PBX1-212ENST00000540236 GAB4Q2WGN9 574 aa9.15□□□□□ -0.94
PBX1-212ENST00000540236 OR4F17Q8NGA8 305 aa9.15□□□□□ -0.94
PBX1-212ENST00000540236 FNDC1Q4ZHG4 1894 aaPredicted RBP9.15□□□□□ -0.94
PBX1-212ENST00000540236 CACNA1DQ01668 2161 aa9.15□□□□□ -0.94
PBX1-212ENST00000540236 A0A1W2PQD3 144 aa9.15□□□□□ -0.94
PBX1-212ENST00000540236 FXYD2P54710 66 aa9.15□□□□□ -0.94
PBX1-212ENST00000540236 RHOGP84095 191 aa9.15□□□□□ -0.94
PBX1-212ENST00000540236 F8W1H4 67 aa9.15□□□□□ -0.95
PBX1-212ENST00000540236 LINC00310P59036 64 aa9.15□□□□□ -0.95
PBX1-212ENST00000540236 IL36GQ9NZH8 169 aa9.15□□□□□ -0.95
PBX1-212ENST00000540236 TCF19Q9Y242 345 aa9.15□□□□□ -0.95
PBX1-212ENST00000540236 YLPM1P49750 1951 aaKnown RBP9.15□□□□□ -0.95
PBX1-212ENST00000540236 A8MWV9 139 aa9.14□□□□□ -0.95
PBX1-212ENST00000540236 HSPE1P61604 102 aaKnown RBP9.14□□□□□ -0.95
PBX1-212ENST00000540236 Q8N976 141 aa9.14□□□□□ -0.95
PBX1-212ENST00000540236 GLRXP35754 106 aa9.14□□□□□ -0.95
PBX1-212ENST00000540236 TMPRSS2O15393 492 aa9.14□□□□□ -0.95
PBX1-212ENST00000540236 SUB1P53999 127 aaKnown RBP eCLIP9.14□□□□□ -0.95
PBX1-212ENST00000540236 C10orf35Q96D05 121 aa9.14□□□□□ -0.95
PBX1-212ENST00000540236 DEFB127Q9H1M4 99 aa9.14□□□□□ -0.95
PBX1-212ENST00000540236 FBLN5Q9UBX5 448 aa9.14□□□□□ -0.95
PBX1-212ENST00000540236 SPRY3O43610 288 aa9.14□□□□□ -0.95
PBX1-212ENST00000540236 VKORC1Q9BQB6 163 aa9.14□□□□□ -0.95
PBX1-212ENST00000540236 MAP1LC3AQ9H492 121 aa9.14□□□□□ -0.95
PBX1-212ENST00000540236 CCDC179H3BU77 68 aa9.14□□□□□ -0.95
PBX1-212ENST00000540236 RS1O15537 224 aa9.14□□□□□ -0.95
PBX1-212ENST00000540236 CACNG8Q8WXS5 425 aa9.14□□□□□ -0.95
PBX1-212ENST00000540236 IFI27L1Q96BM0 104 aa9.14□□□□□ -0.95
PBX1-212ENST00000540236 IGHV3-72A0A0B4J1Y9 119 aa9.13□□□□□ -0.95
PBX1-212ENST00000540236 SMIM27A0A1W2PRY6 76 aa9.13□□□□□ -0.95
PBX1-212ENST00000540236 ATP5J2P56134 94 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms