RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 COMMD3Q9UBI1 195 aa10.31□□□□□ -0.76
SEMA4D-222ENST00000540183 MUC4Q99102 2169 aa10.31□□□□□ -0.76
SEMA4D-222ENST00000540183 TRAV2A0A0B4J234 112 aa10.3□□□□□ -0.76
SEMA4D-222ENST00000540183 TMEM127O75204 238 aa10.3□□□□□ -0.76
SEMA4D-222ENST00000540183 P0C879 139 aa10.3□□□□□ -0.76
SEMA4D-222ENST00000540183 ETV6P41212 452 aa10.3□□□□□ -0.76
SEMA4D-222ENST00000540183 UCP3P55916 312 aa10.3□□□□□ -0.76
SEMA4D-222ENST00000540183 TCTAP57738 103 aa10.3□□□□□ -0.76
SEMA4D-222ENST00000540183 SCRT1Q9BWW7 348 aa10.3□□□□□ -0.76
SEMA4D-222ENST00000540183 CELA1Q9UNI1 258 aa10.3□□□□□ -0.76
SEMA4D-222ENST00000540183 IGHV4-4A0A075B6R2 117 aa10.29□□□□□ -0.76
SEMA4D-222ENST00000540183 A0A0G2JRQ6 117 aa10.29□□□□□ -0.76
SEMA4D-222ENST00000540183 C11orf94C9JXX5 98 aa10.29□□□□□ -0.76
SEMA4D-222ENST00000540183 IFNA17P01571 189 aa10.29□□□□□ -0.76
SEMA4D-222ENST00000540183 CD5P06127 495 aa10.29□□□□□ -0.76
SEMA4D-222ENST00000540183 NPPCP23582 126 aa10.29□□□□□ -0.76
SEMA4D-222ENST00000540183 S100GP29377 79 aa10.29□□□□□ -0.76
SEMA4D-222ENST00000540183 SNCAP37840 140 aa10.29□□□□□ -0.76
SEMA4D-222ENST00000540183 P2RY1P47900 373 aa10.29□□□□□ -0.76
SEMA4D-222ENST00000540183 TIGITQ495A1 244 aa10.29□□□□□ -0.76
SEMA4D-222ENST00000540183 ACTL10Q5JWF8 245 aa10.29□□□□□ -0.76
SEMA4D-222ENST00000540183 PVRIGQ6DKI7 326 aa10.29□□□□□ -0.76
SEMA4D-222ENST00000540183 HRH4Q9H3N8 390 aa10.29□□□□□ -0.76
SEMA4D-222ENST00000540183 ZNF705EA8MWA4 302 aaPredicted RBP10.28□□□□□ -0.76
SEMA4D-222ENST00000540183 CLN5O75503 358 aa10.28□□□□□ -0.76
SEMA4D-222ENST00000540183 MIFP14174 115 aa10.28□□□□□ -0.76
SEMA4D-222ENST00000540183 PGAM2P15259 253 aa10.28□□□□□ -0.76
SEMA4D-222ENST00000540183 RCVRNP35243 200 aa10.28□□□□□ -0.76
SEMA4D-222ENST00000540183 HOXA1P49639 335 aaPredicted RBP10.28□□□□□ -0.76
SEMA4D-222ENST00000540183 SP6Q3SY56 376 aa10.28□□□□□ -0.76
SEMA4D-222ENST00000540183 KCTD21Q4G0X4 260 aa10.28□□□□□ -0.76
SEMA4D-222ENST00000540183 DCANP1Q8TF63 244 aa10.28□□□□□ -0.76
SEMA4D-222ENST00000540183 TMEM231Q9H6L2 316 aa10.28□□□□□ -0.76
SEMA4D-222ENST00000540183 ABCA13Q86UQ4 5058 aa10.28□□□□□ -0.76
SEMA4D-222ENST00000540183 TRAV10A0A0B4J240 114 aa10.27□□□□□ -0.77
SEMA4D-222ENST00000540183 A0A1B0GVY2 172 aa10.27□□□□□ -0.77
SEMA4D-222ENST00000540183 HPGDSO60760 199 aa10.27□□□□□ -0.77
SEMA4D-222ENST00000540183 IGKV1-17P01599 117 aa10.27□□□□□ -0.77
SEMA4D-222ENST00000540183 ELK1P19419 428 aa10.27□□□□□ -0.77
SEMA4D-222ENST00000540183 CRYBB3P26998 211 aa10.27□□□□□ -0.77
SEMA4D-222ENST00000540183 OPRK1P41145 380 aa10.27□□□□□ -0.77
SEMA4D-222ENST00000540183 AKR1C2P52895 323 aa10.27□□□□□ -0.77
SEMA4D-222ENST00000540183 PIGPP57054 158 aa10.27□□□□□ -0.77
SEMA4D-222ENST00000540183 RND3P61587 244 aa10.27□□□□□ -0.77
SEMA4D-222ENST00000540183 NCS1P62166 190 aa10.27□□□□□ -0.77
SEMA4D-222ENST00000540183 CSNK1G2-AS1Q8NCQ2 148 aa10.27□□□□□ -0.77
SEMA4D-222ENST00000540183 TMEM230Q96A57 120 aa10.27□□□□□ -0.77
SEMA4D-222ENST00000540183 GRAMD2BQ96HH9 432 aa10.27□□□□□ -0.77
SEMA4D-222ENST00000540183 METTL26Q96S19 204 aa10.27□□□□□ -0.77
SEMA4D-222ENST00000540183 SCPEP1Q9HB40 452 aa10.27□□□□□ -0.77
SEMA4D-222ENST00000540183 A0A1W2PS18 150 aa10.26□□□□□ -0.77
SEMA4D-222ENST00000540183 INS-IGF2F8WCM5 200 aa10.26□□□□□ -0.77
SEMA4D-222ENST00000540183 APOA1P02647 267 aa10.26□□□□□ -0.77
SEMA4D-222ENST00000540183 SPP1P10451 314 aa10.26□□□□□ -0.77
SEMA4D-222ENST00000540183 DHRS2Q13268 280 aa10.26□□□□□ -0.77
SEMA4D-222ENST00000540183 C12orf74Q32Q52 190 aa10.26□□□□□ -0.77
SEMA4D-222ENST00000540183 MORN3Q6PF18 240 aaPredicted RBP10.26□□□□□ -0.77
SEMA4D-222ENST00000540183 Q6ZRM9 215 aa10.26□□□□□ -0.77
SEMA4D-222ENST00000540183 LHFPL1Q86WI0 220 aa10.26□□□□□ -0.77
SEMA4D-222ENST00000540183 OR4X1Q8NH49 305 aa10.26□□□□□ -0.77
SEMA4D-222ENST00000540183 KLK11Q9UBX7 282 aa10.26□□□□□ -0.77
SEMA4D-222ENST00000540183 TBC1D24Q9ULP9 559 aa10.26□□□□□ -0.77
SEMA4D-222ENST00000540183 C3orf85A0A1B0GTC6 90 aa10.25□□□□□ -0.77
SEMA4D-222ENST00000540183 VBP1P61758 197 aa10.25□□□□□ -0.77
SEMA4D-222ENST00000540183 BSXQ3C1V8 233 aa10.25□□□□□ -0.77
SEMA4D-222ENST00000540183 PSMG4Q5JS54 123 aa10.25□□□□□ -0.77
SEMA4D-222ENST00000540183 OR4D10Q8NGI6 311 aa10.25□□□□□ -0.77
SEMA4D-222ENST00000540183 RAB40CQ96S21 281 aa10.25□□□□□ -0.77
SEMA4D-222ENST00000540183 PDCD10Q9BUL8 212 aa10.25□□□□□ -0.77
SEMA4D-222ENST00000540183 U3KQE9 123 aa10.25□□□□□ -0.77
SEMA4D-222ENST00000540183 NACAE9PAV3 2078 aa10.24□□□□□ -0.77
SEMA4D-222ENST00000540183 DEFB131BA0A096LNP1 70 aa10.24□□□□□ -0.77
SEMA4D-222ENST00000540183 SMIM31A0A1B0GVY4 71 aa10.24□□□□□ -0.77
SEMA4D-222ENST00000540183 M0R2N4 97 aa10.24□□□□□ -0.77
SEMA4D-222ENST00000540183 CORTO00230 105 aa10.24□□□□□ -0.77
SEMA4D-222ENST00000540183 CD3DP04234 171 aa10.24□□□□□ -0.77
SEMA4D-222ENST00000540183 SUB1P53999 127 aaKnown RBP eCLIP10.24□□□□□ -0.77
SEMA4D-222ENST00000540183 TRIM16LQ309B1 348 aa10.24□□□□□ -0.77
SEMA4D-222ENST00000540183 GSG1LQ6UXU4 331 aa10.24□□□□□ -0.77
SEMA4D-222ENST00000540183 GLMPQ8WWB7 406 aa10.24□□□□□ -0.77
SEMA4D-222ENST00000540183 RNF126Q9BV68 326 aa10.24□□□□□ -0.77
SEMA4D-222ENST00000540183 ENY2Q9NPA8 101 aa10.24□□□□□ -0.77
SEMA4D-222ENST00000540183 XCL2Q9UBD3 114 aa10.24□□□□□ -0.77
SEMA4D-222ENST00000540183 HELTA6NFD8 242 aa10.23□□□□□ -0.77
SEMA4D-222ENST00000540183 RTL8CO15255 209 aa10.23□□□□□ -0.77
SEMA4D-222ENST00000540183 IGLC1P0CG04 106 aa10.23□□□□□ -0.77
SEMA4D-222ENST00000540183 RPL5P46777 297 aaKnown RBP10.23□□□□□ -0.77
SEMA4D-222ENST00000540183 RND2P52198 227 aa10.23□□□□□ -0.77
SEMA4D-222ENST00000540183 DEFB1P60022 68 aa10.23□□□□□ -0.77
SEMA4D-222ENST00000540183 USF2Q15853 346 aaPredicted RBP10.23□□□□□ -0.77
SEMA4D-222ENST00000540183 TMEM41BQ5BJD5 291 aa10.23□□□□□ -0.77
SEMA4D-222ENST00000540183 RNASE10Q5GAN6 216 aaKnown RBP10.23□□□□□ -0.77
SEMA4D-222ENST00000540183 C16orf54Q6UWD8 224 aa10.23□□□□□ -0.77
SEMA4D-222ENST00000540183 OR13C8Q8NGS7 320 aa10.23□□□□□ -0.77
SEMA4D-222ENST00000540183 OR52I2Q8NH67 350 aa10.23□□□□□ -0.77
SEMA4D-222ENST00000540183 LHFPL5Q8TAF8 219 aa10.23□□□□□ -0.77
SEMA4D-222ENST00000540183 TMEM170AQ8WVE7 144 aa10.23□□□□□ -0.77
SEMA4D-222ENST00000540183 ZNF486Q96H40 463 aaPredicted RBP10.23□□□□□ -0.77
SEMA4D-222ENST00000540183 FAM25AB3EWG3 89 aa10.22□□□□□ -0.77
SEMA4D-222ENST00000540183 FAM25CB3EWG5 89 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms