RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 GOLT1AQ6ZVE7 132 aa8.29□□□□□ -1.08
TRAF1-202ENST00000540010 GCSAMQ8N6F7 178 aa8.29□□□□□ -1.08
TRAF1-202ENST00000540010 IDI2-AS1Q9NZ38 188 aa8.29□□□□□ -1.08
TRAF1-202ENST00000540010 S4R3C0 116 aa8.29□□□□□ -1.08
TRAF1-202ENST00000540010 PTPRBP23467 1997 aa8.29□□□□□ -1.08
TRAF1-202ENST00000540010 TRBV24-1A0A075B6N3 115 aa8.29□□□□□ -1.08
TRAF1-202ENST00000540010 RBFOX2O43251 390 aaKnown RBP eCLIP8.29□□□□□ -1.08
TRAF1-202ENST00000540010 GPX4P36969 197 aaPredicted RBP8.29□□□□□ -1.08
TRAF1-202ENST00000540010 SLC25A34Q6PIV7 304 aa8.29□□□□□ -1.08
TRAF1-202ENST00000540010 ZCCHC24Q8N2G6 241 aaKnown RBP8.29□□□□□ -1.08
TRAF1-202ENST00000540010 TMEM256Q8N2U0 113 aa8.29□□□□□ -1.08
TRAF1-202ENST00000540010 RAB1CQ92928 201 aa8.29□□□□□ -1.08
TRAF1-202ENST00000540010 SFXN3Q9BWM7 321 aa8.29□□□□□ -1.08
TRAF1-202ENST00000540010 IGKV1-5P01602 117 aa8.28□□□□□ -1.08
TRAF1-202ENST00000540010 LINC00305Q7Z4B0 112 aa8.28□□□□□ -1.08
TRAF1-202ENST00000540010 SSBP4Q9BWG4 385 aaPredicted RBP8.28□□□□□ -1.08
TRAF1-202ENST00000540010 TMEM106BQ9NUM4 274 aa8.28□□□□□ -1.08
TRAF1-202ENST00000540010 FAM215AQ9Y5M1 114 aa8.28□□□□□ -1.08
TRAF1-202ENST00000540010 PSPNO60542 156 aa8.28□□□□□ -1.08
TRAF1-202ENST00000540010 CKS2P33552 79 aa8.28□□□□□ -1.08
TRAF1-202ENST00000540010 FAM27E3Q08E93 113 aa8.28□□□□□ -1.08
TRAF1-202ENST00000540010 GUSBP1Q15486 140 aa8.28□□□□□ -1.08
TRAF1-202ENST00000540010 TWIST1Q15672 202 aa8.28□□□□□ -1.08
TRAF1-202ENST00000540010 ECSCRQ19T08 205 aa8.28□□□□□ -1.08
TRAF1-202ENST00000540010 TIMM23BQ5SRD1 257 aa8.28□□□□□ -1.08
TRAF1-202ENST00000540010 MBD3L1Q8WWY6 194 aa8.28□□□□□ -1.08
TRAF1-202ENST00000540010 PMCHL2Q9BQD1 86 aa8.28□□□□□ -1.08
TRAF1-202ENST00000540010 LIME1Q9H400 295 aa8.28□□□□□ -1.08
TRAF1-202ENST00000540010 NRN1Q9NPD7 142 aa8.28□□□□□ -1.08
TRAF1-202ENST00000540010 A6NDN8 102 aa8.28□□□□□ -1.08
TRAF1-202ENST00000540010 HTN1P15515 57 aa8.28□□□□□ -1.08
TRAF1-202ENST00000540010 TBR1Q16650 682 aa8.28□□□□□ -1.08
TRAF1-202ENST00000540010 CEP295Q9C0D2 2601 aa8.28□□□□□ -1.08
TRAF1-202ENST00000540010 MALRD1Q5VYJ5 2156 aa8.28□□□□□ -1.08
TRAF1-202ENST00000540010 RPL30P62888 115 aaKnown RBP8.27□□□□□ -1.08
TRAF1-202ENST00000540010 ZNF474Q6S9Z5 364 aaPredicted RBP8.27□□□□□ -1.08
TRAF1-202ENST00000540010 ZNF841Q6ZN19 808 aa8.27□□□□□ -1.08
TRAF1-202ENST00000540010 SEM1Q6ZVN7 128 aa8.27□□□□□ -1.08
TRAF1-202ENST00000540010 OR4C13Q8NGP0 309 aa8.27□□□□□ -1.08
TRAF1-202ENST00000540010 MRPL37Q9BZE1 423 aaKnown RBP8.27□□□□□ -1.08
TRAF1-202ENST00000540010 PIEZO2Q9H5I5 2752 aa8.27□□□□□ -1.08
TRAF1-202ENST00000540010 WNK1Q9H4A3 2382 aa8.27□□□□□ -1.09
TRAF1-202ENST00000540010 IGHV3OR16-13A0A075B7E8 117 aa8.27□□□□□ -1.09
TRAF1-202ENST00000540010 IGHV3-74A0A0B4J1X5 117 aa8.27□□□□□ -1.09
TRAF1-202ENST00000540010 NUDT3O95989 172 aa8.27□□□□□ -1.09
TRAF1-202ENST00000540010 SLC25A15Q9Y619 301 aa8.27□□□□□ -1.09
TRAF1-202ENST00000540010 PTPRQQ9UMZ3 2332 aa8.27□□□□□ -1.09
TRAF1-202ENST00000540010 A6NNC1 897 aa8.27□□□□□ -1.09
TRAF1-202ENST00000540010 NDUFA2O43678 99 aa8.27□□□□□ -1.09
TRAF1-202ENST00000540010 NBEAP1P0C6P0 100 aa8.27□□□□□ -1.09
TRAF1-202ENST00000540010 BTF3P20290 206 aaKnown RBP8.27□□□□□ -1.09
TRAF1-202ENST00000540010 TIMP3P35625 211 aa8.27□□□□□ -1.09
TRAF1-202ENST00000540010 LGALS7P47929 136 aa8.27□□□□□ -1.09
TRAF1-202ENST00000540010 ZNF146Q15072 292 aa8.27□□□□□ -1.09
TRAF1-202ENST00000540010 C12orf54Q6X4T0 127 aa8.27□□□□□ -1.09
TRAF1-202ENST00000540010 C20orf204Q6ZNR8 217 aa8.27□□□□□ -1.09
TRAF1-202ENST00000540010 F11RQ9Y624 299 aaKnown RBP8.27□□□□□ -1.09
TRAF1-202ENST00000540010 SELENOKQ9Y6D0 94 aa8.27□□□□□ -1.09
TRAF1-202ENST00000540010 TMEM50AO95807 157 aa8.27□□□□□ -1.09
TRAF1-202ENST00000540010 OR9G9P0C7N8 305 aa8.27□□□□□ -1.09
TRAF1-202ENST00000540010 SRSF9Q13242 221 aaKnown RBP eCLIP8.27□□□□□ -1.09
TRAF1-202ENST00000540010 SPSB3Q6PJ21 355 aa8.27□□□□□ -1.09
TRAF1-202ENST00000540010 ZNF497Q6ZNH5 498 aa8.27□□□□□ -1.09
TRAF1-202ENST00000540010 WDR86Q86TI4 376 aa8.27□□□□□ -1.09
TRAF1-202ENST00000540010 Q8NFD4 153 aa8.27□□□□□ -1.09
TRAF1-202ENST00000540010 ZGRF1Q86YA3 2104 aa8.27□□□□□ -1.09
TRAF1-202ENST00000540010 IGHV3OR16-8A0A075B7F1 116 aa8.26□□□□□ -1.09
TRAF1-202ENST00000540010 TMEM189A5PLL7 270 aa8.26□□□□□ -1.09
TRAF1-202ENST00000540010 SELLP14151 372 aa8.26□□□□□ -1.09
TRAF1-202ENST00000540010 GCSHP23434 173 aa8.26□□□□□ -1.09
TRAF1-202ENST00000540010 MC5RP33032 325 aa8.26□□□□□ -1.09
TRAF1-202ENST00000540010 ZNF124Q15973 351 aa8.26□□□□□ -1.09
TRAF1-202ENST00000540010 OR2T8A6NH00 312 aa8.26□□□□□ -1.09
TRAF1-202ENST00000540010 ARF6P62330 175 aa8.26□□□□□ -1.09
TRAF1-202ENST00000540010 SPANXN1Q5VSR9 72 aa8.26□□□□□ -1.09
TRAF1-202ENST00000540010 LEMD1Q68G75 181 aa8.26□□□□□ -1.09
TRAF1-202ENST00000540010 LHFPL4Q7Z7J7 247 aa8.26□□□□□ -1.09
TRAF1-202ENST00000540010 IFNL4K9M1U5 179 aa8.26□□□□□ -1.09
TRAF1-202ENST00000540010 MLNRO43193 412 aa8.26□□□□□ -1.09
TRAF1-202ENST00000540010 GOSR1O95249 250 aa8.26□□□□□ -1.09
TRAF1-202ENST00000540010 TMPRSS3P57727 454 aa8.26□□□□□ -1.09
TRAF1-202ENST00000540010 TEX38Q6PEX7 206 aa8.26□□□□□ -1.09
TRAF1-202ENST00000540010 C1orf174Q8IYL3 243 aa8.26□□□□□ -1.09
TRAF1-202ENST00000540010 SLC25A33Q9BSK2 321 aa8.26□□□□□ -1.09
TRAF1-202ENST00000540010 TMEM70Q9BUB7 260 aa8.26□□□□□ -1.09
TRAF1-202ENST00000540010 RAB1BQ9H0U4 201 aa8.26□□□□□ -1.09
TRAF1-202ENST00000540010 WDR83OSQ9Y284 106 aa8.26□□□□□ -1.09
TRAF1-202ENST00000540010 HLA-DRB1P01911 266 aa8.25□□□□□ -1.09
TRAF1-202ENST00000540010 LYL1P12980 280 aa8.25□□□□□ -1.09
TRAF1-202ENST00000540010 CCL3L1P16619 93 aa8.25□□□□□ -1.09
TRAF1-202ENST00000540010 CA7P43166 264 aa8.25□□□□□ -1.09
TRAF1-202ENST00000540010 MBNL2Q5VZF2 373 aaKnown RBP8.25□□□□□ -1.09
TRAF1-202ENST00000540010 ZNF788Q6ZQV5 615 aa8.25□□□□□ -1.09
TRAF1-202ENST00000540010 OR4A5Q8NH83 315 aa8.25□□□□□ -1.09
TRAF1-202ENST00000540010 IFI27L2Q9H2X8 130 aa8.25□□□□□ -1.09
TRAF1-202ENST00000540010 AP5S1Q9NUS5 200 aa8.25□□□□□ -1.09
TRAF1-202ENST00000540010 ZFP30Q9Y2G7 519 aa8.25□□□□□ -1.09
TRAF1-202ENST00000540010 HIGD1CA8MV81 97 aa8.25□□□□□ -1.09
TRAF1-202ENST00000540010 PYYP10082 97 aa8.25□□□□□ -1.09
TRAF1-202ENST00000540010 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms