RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 MTORP42345 2549 aa8.34□□□□□ -1.07
LEMD3-202ENST00000539442 TRBV9A0A0B4J1U6 114 aa8.34□□□□□ -1.07
LEMD3-202ENST00000539442 UBE2L5PA0A1B0GUS4 154 aa8.34□□□□□ -1.07
LEMD3-202ENST00000539442 TMEM89A2RUT3 159 aa8.34□□□□□ -1.07
LEMD3-202ENST00000539442 I3L2K1 104 aa8.34□□□□□ -1.07
LEMD3-202ENST00000539442 TCF21O43680 179 aa8.34□□□□□ -1.07
LEMD3-202ENST00000539442 MPDU1O75352 247 aa8.34□□□□□ -1.07
LEMD3-202ENST00000539442 MT-CO2P00403 227 aa8.34□□□□□ -1.07
LEMD3-202ENST00000539442 CRYBA1P05813 215 aa8.34□□□□□ -1.07
LEMD3-202ENST00000539442 CFHR3Q02985 330 aa8.34□□□□□ -1.07
LEMD3-202ENST00000539442 TMEM144Q7Z5S9 345 aa8.34□□□□□ -1.07
LEMD3-202ENST00000539442 BAP18Q8IXM2 172 aa8.34□□□□□ -1.07
LEMD3-202ENST00000539442 OR2T6Q8NHC8 308 aa8.34□□□□□ -1.07
LEMD3-202ENST00000539442 SCGB1C1Q8TD33 95 aa8.34□□□□□ -1.07
LEMD3-202ENST00000539442 ST8SIA2Q92186 375 aa8.34□□□□□ -1.07
LEMD3-202ENST00000539442 PHYHIPLQ96FC7 376 aa8.34□□□□□ -1.07
LEMD3-202ENST00000539442 NOL4LQ96MY1 436 aaPredicted RBP8.34□□□□□ -1.07
LEMD3-202ENST00000539442 WDR61Q9GZS3 305 aaKnown RBP8.34□□□□□ -1.07
LEMD3-202ENST00000539442 FNDC4Q9H6D8 234 aaPredicted RBP8.34□□□□□ -1.07
LEMD3-202ENST00000539442 SLA2Q9H6Q3 261 aa8.34□□□□□ -1.07
LEMD3-202ENST00000539442 ZFAND3Q9H8U3 227 aa8.34□□□□□ -1.07
LEMD3-202ENST00000539442 WDR83OSQ9Y284 106 aa8.34□□□□□ -1.07
LEMD3-202ENST00000539442 NSD1Q96L73 2696 aaPredicted RBP8.33□□□□□ -1.08
LEMD3-202ENST00000539442 SMCO3A2RU48 225 aa8.33□□□□□ -1.08
LEMD3-202ENST00000539442 FAM223BA6NKX1 122 aa8.33□□□□□ -1.08
LEMD3-202ENST00000539442 K7EIM0 57 aa8.33□□□□□ -1.08
LEMD3-202ENST00000539442 SOX15O60248 233 aa8.33□□□□□ -1.08
LEMD3-202ENST00000539442 MDKP21741 143 aaPredicted RBP8.33□□□□□ -1.08
LEMD3-202ENST00000539442 SLC35B1P78383 322 aa8.33□□□□□ -1.08
LEMD3-202ENST00000539442 AKR1C1Q04828 323 aa8.33□□□□□ -1.08
LEMD3-202ENST00000539442 GAMTQ14353 236 aa8.33□□□□□ -1.08
LEMD3-202ENST00000539442 EIF5AL1Q6IS14 154 aaKnown RBP8.33□□□□□ -1.08
LEMD3-202ENST00000539442 Q6ZSV7 163 aa8.33□□□□□ -1.08
LEMD3-202ENST00000539442 FAM223AQ8IWN6 122 aa8.33□□□□□ -1.08
LEMD3-202ENST00000539442 NECAP1Q8NC96 275 aa8.33□□□□□ -1.08
LEMD3-202ENST00000539442 TMEM116Q8NCL8 245 aa8.33□□□□□ -1.08
LEMD3-202ENST00000539442 VN1R17PQ8TDU5 208 aa8.33□□□□□ -1.08
LEMD3-202ENST00000539442 GNPNAT1Q96EK6 184 aaPredicted RBP8.33□□□□□ -1.08
LEMD3-202ENST00000539442 GINS3Q9BRX5 216 aa8.33□□□□□ -1.08
LEMD3-202ENST00000539442 ZNF355PQ9NSJ1 428 aa8.33□□□□□ -1.08
LEMD3-202ENST00000539442 LINC00527Q9UJ94 153 aa8.33□□□□□ -1.08
LEMD3-202ENST00000539442 OR2J3O76001 311 aa8.32□□□□□ -1.08
LEMD3-202ENST00000539442 IGLV1-40P01703 118 aa8.32□□□□□ -1.08
LEMD3-202ENST00000539442 IGHG4P01861 327 aa8.32□□□□□ -1.08
LEMD3-202ENST00000539442 PRH1P02810 166 aa8.32□□□□□ -1.08
LEMD3-202ENST00000539442 SEC11BP0C7V7 166 aa8.32□□□□□ -1.08
LEMD3-202ENST00000539442 FGF7P21781 194 aa8.32□□□□□ -1.08
LEMD3-202ENST00000539442 RAB31Q13636 194 aa8.32□□□□□ -1.08
LEMD3-202ENST00000539442 TMEM95Q3KNT9 176 aa8.32□□□□□ -1.08
LEMD3-202ENST00000539442 TEPPQ6URK8 271 aa8.32□□□□□ -1.08
LEMD3-202ENST00000539442 TEX261Q6UWH6 196 aa8.32□□□□□ -1.08
LEMD3-202ENST00000539442 BTNL8Q6UX41 500 aa8.32□□□□□ -1.08
LEMD3-202ENST00000539442 HSD17B11Q8NBQ5 300 aa8.32□□□□□ -1.08
LEMD3-202ENST00000539442 OR4X1Q8NH49 305 aa8.32□□□□□ -1.08
LEMD3-202ENST00000539442 TAF15Q92804 592 aaKnown RBP eCLIP8.32□□□□□ -1.08
LEMD3-202ENST00000539442 CXorf58Q96LI9 332 aa8.32□□□□□ -1.08
LEMD3-202ENST00000539442 ATP6V0BQ99437 205 aa8.32□□□□□ -1.08
LEMD3-202ENST00000539442 PSMG3Q9BT73 122 aaPredicted RBP8.32□□□□□ -1.08
LEMD3-202ENST00000539442 C16orf95Q9H693 158 aa8.32□□□□□ -1.08
LEMD3-202ENST00000539442 KCNIP2Q9NS61 270 aa8.32□□□□□ -1.08
LEMD3-202ENST00000539442 SERTAD4Q9NUC0 356 aa8.32□□□□□ -1.08
LEMD3-202ENST00000539442 FBXL7Q9UJT9 491 aa8.32□□□□□ -1.08
LEMD3-202ENST00000539442 LSM4Q9Y4Z0 139 aaKnown RBP8.32□□□□□ -1.08
LEMD3-202ENST00000539442 TIMM9Q9Y5J7 89 aa8.32□□□□□ -1.08
LEMD3-202ENST00000539442 FN1P02751 2386 aaKnown RBP8.32□□□□□ -1.08
LEMD3-202ENST00000539442 PSMB11A5LHX3 300 aa8.31□□□□□ -1.08
LEMD3-202ENST00000539442 C17orf112F2Z3M2 114 aa8.31□□□□□ -1.08
LEMD3-202ENST00000539442 SCGB2A1O75556 95 aa8.31□□□□□ -1.08
LEMD3-202ENST00000539442 NDUFB8O95169 186 aa8.31□□□□□ -1.08
LEMD3-202ENST00000539442 NDUFA7O95182 113 aa8.31□□□□□ -1.08
LEMD3-202ENST00000539442 IFNA7P01567 189 aa8.31□□□□□ -1.08
LEMD3-202ENST00000539442 TRGV3P03979 118 aa8.31□□□□□ -1.08
LEMD3-202ENST00000539442 ELANEP08246 267 aa8.31□□□□□ -1.08
LEMD3-202ENST00000539442 SPP1P10451 314 aa8.31□□□□□ -1.08
LEMD3-202ENST00000539442 ATP6V0CP27449 155 aa8.31□□□□□ -1.08
LEMD3-202ENST00000539442 FCGR2BP31994 310 aaPredicted RBP8.31□□□□□ -1.08
LEMD3-202ENST00000539442 NPBWR1P48145 328 aa8.31□□□□□ -1.08
LEMD3-202ENST00000539442 RND2P52198 227 aa8.31□□□□□ -1.08
LEMD3-202ENST00000539442 MFAP4P55083 255 aa8.31□□□□□ -1.08
LEMD3-202ENST00000539442 RHOGP84095 191 aa8.31□□□□□ -1.08
LEMD3-202ENST00000539442 MLANAQ16655 118 aa8.31□□□□□ -1.08
LEMD3-202ENST00000539442 ACSM6Q6P461 480 aa8.31□□□□□ -1.08
LEMD3-202ENST00000539442 CENPVQ7Z7K6 275 aaPredicted RBP8.31□□□□□ -1.08
LEMD3-202ENST00000539442 COMMD1Q8N668 190 aa8.31□□□□□ -1.08
LEMD3-202ENST00000539442 ZNF709Q8N972 641 aa8.31□□□□□ -1.08
LEMD3-202ENST00000539442 THAP8Q8NA92 274 aa8.31□□□□□ -1.08
LEMD3-202ENST00000539442 SCARB1Q8WTV0 552 aa8.31□□□□□ -1.08
LEMD3-202ENST00000539442 NPIPB3Q92617 1050 aa8.31□□□□□ -1.08
LEMD3-202ENST00000539442 ACY3Q96HD9 319 aa8.31□□□□□ -1.08
LEMD3-202ENST00000539442 USMG5Q96IX5 58 aa8.31□□□□□ -1.08
LEMD3-202ENST00000539442 TXN2Q99757 166 aa8.31□□□□□ -1.08
LEMD3-202ENST00000539442 NPCDR1Q9BY65 106 aa8.31□□□□□ -1.08
LEMD3-202ENST00000539442 GAR1Q9NY12 217 aaKnown RBP8.31□□□□□ -1.08
LEMD3-202ENST00000539442 C21orf62Q9NYP8 219 aa8.31□□□□□ -1.08
LEMD3-202ENST00000539442 TRAV30A0A087WSZ9 112 aa8.3□□□□□ -1.08
LEMD3-202ENST00000539442 TRBV7-1A0A0A6YYK4 115 aa8.3□□□□□ -1.08
LEMD3-202ENST00000539442 A0A0G2JLM5 398 aa8.3□□□□□ -1.08
LEMD3-202ENST00000539442 MFSD2BA6NFX1 497 aa8.3□□□□□ -1.08
LEMD3-202ENST00000539442 CLN5O75503 358 aa8.3□□□□□ -1.08
LEMD3-202ENST00000539442 CFDP00746 253 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms