RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 Q9H3A6 140 aa12.08□□□□□ -0.48
CACNB1-206ENST00000539338 RPP21Q9H633 154 aaKnown RBP12.08□□□□□ -0.48
CACNB1-206ENST00000539338 C21orf62Q9NYP8 219 aa12.08□□□□□ -0.48
CACNB1-206ENST00000539338 TIMM23O14925 209 aa12.08□□□□□ -0.48
CACNB1-206ENST00000539338 RNASEH2CQ8TDP1 164 aaKnown RBP12.08□□□□□ -0.48
CACNB1-206ENST00000539338 TMEM158Q8WZ71 300 aa12.08□□□□□ -0.48
CACNB1-206ENST00000539338 PRELID3AQ96N28 172 aa12.08□□□□□ -0.48
CACNB1-206ENST00000539338 SERF1AO75920 110 aa12.08□□□□□ -0.48
CACNB1-206ENST00000539338 DUTP33316 252 aaKnown RBP12.08□□□□□ -0.48
CACNB1-206ENST00000539338 FOXF2Q12947 444 aa12.07□□□□□ -0.48
CACNB1-206ENST00000539338 ZNF581Q9P0T4 197 aa12.07□□□□□ -0.48
CACNB1-206ENST00000539338 A0A1B0GUT8 65 aa12.07□□□□□ -0.48
CACNB1-206ENST00000539338 NPIPB6E9PJ23 425 aa12.07□□□□□ -0.48
CACNB1-206ENST00000539338 HIGD1CA8MV81 97 aa12.07□□□□□ -0.48
CACNB1-206ENST00000539338 HIST1H2BKO60814 126 aa12.07□□□□□ -0.48
CACNB1-206ENST00000539338 CD5P06127 495 aa12.07□□□□□ -0.48
CACNB1-206ENST00000539338 HIST1H2BJP06899 126 aa12.07□□□□□ -0.48
CACNB1-206ENST00000539338 PRSS2P07478 247 aa12.07□□□□□ -0.48
CACNB1-206ENST00000539338 PYYP10082 97 aa12.07□□□□□ -0.48
CACNB1-206ENST00000539338 HIST1H2BOP23527 126 aa12.07□□□□□ -0.48
CACNB1-206ENST00000539338 HIST1H2BBP33778 126 aa12.07□□□□□ -0.48
CACNB1-206ENST00000539338 VDAC2P45880 294 aaPredicted RBP12.07□□□□□ -0.48
CACNB1-206ENST00000539338 HIST1H2BDP58876 126 aa12.07□□□□□ -0.48
CACNB1-206ENST00000539338 HIST1H2BCP62807 126 aa12.07□□□□□ -0.48
CACNB1-206ENST00000539338 ZNF56Q15929 161 aa12.07□□□□□ -0.48
CACNB1-206ENST00000539338 HIST2H2BEQ16778 126 aa12.07□□□□□ -0.48
CACNB1-206ENST00000539338 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.07□□□□□ -0.48
CACNB1-206ENST00000539338 HIST1H2BHQ93079 126 aa12.07□□□□□ -0.48
CACNB1-206ENST00000539338 HIST1H2BNQ99877 126 aa12.07□□□□□ -0.48
CACNB1-206ENST00000539338 HIST1H2BMQ99879 126 aa12.07□□□□□ -0.48
CACNB1-206ENST00000539338 M0R381 172 aa12.07□□□□□ -0.48
CACNB1-206ENST00000539338 CD24P25063 80 aa12.07□□□□□ -0.48
CACNB1-206ENST00000539338 ADMP35318 185 aa12.07□□□□□ -0.48
CACNB1-206ENST00000539338 ZNF600Q6ZNG1 722 aa12.07□□□□□ -0.48
CACNB1-206ENST00000539338 LINC01356Q8N9X3 169 aa12.07□□□□□ -0.48
CACNB1-206ENST00000539338 ZNF414Q96IQ9 312 aa12.07□□□□□ -0.48
CACNB1-206ENST00000539338 TMEM160Q9NX00 188 aa12.07□□□□□ -0.48
CACNB1-206ENST00000539338 MIEN1Q9BRT3 115 aa12.07□□□□□ -0.48
CACNB1-206ENST00000539338 SSBP4Q9BWG4 385 aaPredicted RBP12.07□□□□□ -0.48
CACNB1-206ENST00000539338 PLXNA3P51805 1871 aa12.06□□□□□ -0.48
CACNB1-206ENST00000539338 LYNX1G3V0Z9 82 aa12.06□□□□□ -0.48
CACNB1-206ENST00000539338 LYNX1P0DP58 116 aa12.06□□□□□ -0.48
CACNB1-206ENST00000539338 ARPC1AQ92747 370 aa12.06□□□□□ -0.48
CACNB1-206ENST00000539338 FMC1Q96HJ9 113 aa12.06□□□□□ -0.48
CACNB1-206ENST00000539338 AMMECR1LQ6DCA0 310 aa12.06□□□□□ -0.48
CACNB1-206ENST00000539338 DMRTA2Q96SC8 542 aa12.06□□□□□ -0.48
CACNB1-206ENST00000539338 POLEQ07864 2286 aa12.06□□□□□ -0.48
CACNB1-206ENST00000539338 IZUMO1RA6ND01 250 aa12.06□□□□□ -0.48
CACNB1-206ENST00000539338 SELLP14151 372 aa12.06□□□□□ -0.48
CACNB1-206ENST00000539338 TMEM170AQ8WVE7 144 aa12.06□□□□□ -0.48
CACNB1-206ENST00000539338 CD33P20138 364 aa12.06□□□□□ -0.48
CACNB1-206ENST00000539338 FAM159AQ6UWV7 190 aa12.06□□□□□ -0.48
CACNB1-206ENST00000539338 REG4Q9BYZ8 158 aa12.06□□□□□ -0.48
CACNB1-206ENST00000539338 C1QL4Q86Z23 238 aa12.05□□□□□ -0.48
CACNB1-206ENST00000539338 OCC1Q8TAD7 63 aa12.05□□□□□ -0.48
CACNB1-206ENST00000539338 Q96MF0 132 aa12.05□□□□□ -0.48
CACNB1-206ENST00000539338 TRAV8-6A0A0B4J262 113 aa12.05□□□□□ -0.48
CACNB1-206ENST00000539338 C9JCJ5 164 aa12.05□□□□□ -0.48
CACNB1-206ENST00000539338 LGALS3P17931 250 aaKnown RBP12.05□□□□□ -0.48
CACNB1-206ENST00000539338 TAS2R60P59551 318 aa12.05□□□□□ -0.48
CACNB1-206ENST00000539338 C19orf54Q5BKX5 351 aa12.05□□□□□ -0.48
CACNB1-206ENST00000539338 PPP1R27Q86WC6 154 aa12.05□□□□□ -0.48
CACNB1-206ENST00000539338 PSPNO60542 156 aa12.05□□□□□ -0.48
CACNB1-206ENST00000539338 PRB4P10163 310 aaPredicted RBP12.05□□□□□ -0.48
CACNB1-206ENST00000539338 Q0VFX4 171 aa12.05□□□□□ -0.48
CACNB1-206ENST00000539338 HGFACQ04756 655 aa12.05□□□□□ -0.48
CACNB1-206ENST00000539338 FHL1Q13642 323 aa12.05□□□□□ -0.48
CACNB1-206ENST00000539338 EFNB3Q15768 340 aa12.05□□□□□ -0.48
CACNB1-206ENST00000539338 PRSS8Q16651 343 aa12.05□□□□□ -0.48
CACNB1-206ENST00000539338 CLEC19AQ6UXS0 136 aa12.05□□□□□ -0.48
CACNB1-206ENST00000539338 RRN3P1Q2M238 152 aa12.04□□□□□ -0.48
CACNB1-206ENST00000539338 WDR83OSQ9Y284 106 aa12.04□□□□□ -0.48
CACNB1-206ENST00000539338 QRFPP83859 136 aa12.04□□□□□ -0.48
CACNB1-206ENST00000539338 HEPN1Q6WQI6 88 aa12.04□□□□□ -0.48
CACNB1-206ENST00000539338 DUX5Q96PT3 197 aa12.04□□□□□ -0.48
CACNB1-206ENST00000539338 CXCL1P09341 107 aa12.04□□□□□ -0.48
CACNB1-206ENST00000539338 OR10W1Q8NGF6 305 aa12.04□□□□□ -0.48
CACNB1-206ENST00000539338 COLCA2A8K830 154 aa12.04□□□□□ -0.48
CACNB1-206ENST00000539338 UBE2L6O14933 153 aa12.04□□□□□ -0.48
CACNB1-206ENST00000539338 LILRA1O75019 489 aa12.04□□□□□ -0.48
CACNB1-206ENST00000539338 PRB1P04280 392 aa12.04□□□□□ -0.48
CACNB1-206ENST00000539338 MBD3L1Q8WWY6 194 aa12.04□□□□□ -0.48
CACNB1-206ENST00000539338 KIR2DL4Q99706 377 aa12.04□□□□□ -0.48
CACNB1-206ENST00000539338 A6NNC1 897 aa12.03□□□□□ -0.48
CACNB1-206ENST00000539338 LHFPL4Q7Z7J7 247 aa12.03□□□□□ -0.48
CACNB1-206ENST00000539338 NRN1Q9NPD7 142 aa12.03□□□□□ -0.48
CACNB1-206ENST00000539338 COL4A6Q14031 1691 aa12.03□□□□□ -0.48
CACNB1-206ENST00000539338 GATA3P23771 443 aa12.03□□□□□ -0.48
CACNB1-206ENST00000539338 RAX2Q96IS3 184 aa12.03□□□□□ -0.48
CACNB1-206ENST00000539338 ROS1P08922 2347 aa12.03□□□□□ -0.48
CACNB1-206ENST00000539338 TRAV9-1A0A075B6T8 112 aa12.03□□□□□ -0.48
CACNB1-206ENST00000539338 TCRBV4S1A1TA0A5B7 111 aa12.03□□□□□ -0.48
CACNB1-206ENST00000539338 PRO3102Q9H379 93 aa12.03□□□□□ -0.48
CACNB1-206ENST00000539338 SPTBN1Q01082 2364 aaKnown RBP12.03□□□□□ -0.48
CACNB1-206ENST00000539338 IGF2-ASQ6U949 168 aa12.03□□□□□ -0.48
CACNB1-206ENST00000539338 PRCDQ00LT1 54 aa12.02□□□□□ -0.48
CACNB1-206ENST00000539338 CD69Q07108 199 aa12.02□□□□□ -0.48
CACNB1-206ENST00000539338 TMEM133Q9H2Q1 129 aa12.02□□□□□ -0.48
CACNB1-206ENST00000539338 IGHV1-46P01743 117 aa12.02□□□□□ -0.48
CACNB1-206ENST00000539338 SNRPD3P62318 126 aaKnown RBP12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms