RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 OR7C1O76099 320 aaPredicted RBP0.83□□□□□ -2.28
CCDC7-209ENST00000539197 CTSDP07339 412 aaPredicted RBP0.83□□□□□ -2.28
CCDC7-209ENST00000539197 RBP1P09455 135 aa0.83□□□□□ -2.28
CCDC7-209ENST00000539197 METTL15P1P0C7V9 234 aa0.83□□□□□ -2.28
CCDC7-209ENST00000539197 SPI1P17947 270 aa0.83□□□□□ -2.28
CCDC7-209ENST00000539197 FKBP2P26885 142 aaKnown RBP0.83□□□□□ -2.28
CCDC7-209ENST00000539197 SERPINB9P50453 376 aa0.83□□□□□ -2.28
CCDC7-209ENST00000539197 CTAG1AP78358 180 aa0.83□□□□□ -2.28
CCDC7-209ENST00000539197 MRPS25P82663 173 aaKnown RBP0.83□□□□□ -2.28
CCDC7-209ENST00000539197 ZNF846Q147U1 533 aa0.83□□□□□ -2.28
CCDC7-209ENST00000539197 ELOBQ15370 118 aa0.83□□□□□ -2.28
CCDC7-209ENST00000539197 TAF1AQ15573 450 aaPredicted RBP0.83□□□□□ -2.28
CCDC7-209ENST00000539197 NDUFA5Q16718 116 aa0.83□□□□□ -2.28
CCDC7-209ENST00000539197 AKIRIN2Q53H80 203 aa0.83□□□□□ -2.28
CCDC7-209ENST00000539197 DPPA3Q6W0C5 159 aa0.83□□□□□ -2.28
CCDC7-209ENST00000539197 MIR17HGQ75NE6 70 aa0.83□□□□□ -2.28
CCDC7-209ENST00000539197 AAED1Q7RTV5 226 aa0.83□□□□□ -2.28
CCDC7-209ENST00000539197 OOSP2Q86WS3 158 aa0.83□□□□□ -2.28
CCDC7-209ENST00000539197 C15orf53Q8NAA6 179 aa0.83□□□□□ -2.28
CCDC7-209ENST00000539197 OR10X1Q8NGY0 326 aa0.83□□□□□ -2.28
CCDC7-209ENST00000539197 CDC26Q8NHZ8 85 aa0.83□□□□□ -2.28
CCDC7-209ENST00000539197 KIFC1Q9BW19 673 aa0.83□□□□□ -2.28
CCDC7-209ENST00000539197 YIPF3Q9GZM5 350 aa0.83□□□□□ -2.28
CCDC7-209ENST00000539197 ENY2Q9NPA8 101 aa0.83□□□□□ -2.28
CCDC7-209ENST00000539197 SLC39A9Q9NUM3 307 aa0.83□□□□□ -2.28
CCDC7-209ENST00000539197 CKLFQ9UBR5 152 aa0.83□□□□□ -2.28
CCDC7-209ENST00000539197 ERGIC3Q9Y282 383 aa0.83□□□□□ -2.28
CCDC7-209ENST00000539197 ARL2BPQ9Y2Y0 163 aa0.83□□□□□ -2.28
CCDC7-209ENST00000539197 FAM32AQ9Y421 112 aaKnown RBP0.83□□□□□ -2.28
CCDC7-209ENST00000539197 DISP1Q96F81 1524 aa0.83□□□□□ -2.28
CCDC7-209ENST00000539197 HECW1Q76N89 1606 aa0.82□□□□□ -2.28
CCDC7-209ENST00000539197 PIK3C2GO75747 1445 aa0.82□□□□□ -2.28
CCDC7-209ENST00000539197 KIAA2026Q5HYC2 2103 aa0.82□□□□□ -2.28
CCDC7-209ENST00000539197 TRAPPC13A5PLN9 417 aa0.82□□□□□ -2.28
CCDC7-209ENST00000539197 FAM159BA6NKW6 160 aa0.82□□□□□ -2.28
CCDC7-209ENST00000539197 C1orf196B1AJZ1 125 aa0.82□□□□□ -2.28
CCDC7-209ENST00000539197 C8GP07360 202 aa0.82□□□□□ -2.28
CCDC7-209ENST00000539197 RPSAP08865 295 aaKnown RBP0.82□□□□□ -2.28
CCDC7-209ENST00000539197 HTR1AP08908 422 aa0.82□□□□□ -2.28
CCDC7-209ENST00000539197 CST2P09228 141 aa0.82□□□□□ -2.28
CCDC7-209ENST00000539197 SRIP30626 198 aa0.82□□□□□ -2.28
CCDC7-209ENST00000539197 BASP1P80723 227 aaKnown RBP0.82□□□□□ -2.28
CCDC7-209ENST00000539197 LIN52Q52LA3 116 aa0.82□□□□□ -2.28
CCDC7-209ENST00000539197 LINC01554Q52M75 96 aa0.82□□□□□ -2.28
CCDC7-209ENST00000539197 KHDC3LQ587J8 217 aa0.82□□□□□ -2.28
CCDC7-209ENST00000539197 Q6Q795 121 aa0.82□□□□□ -2.28
CCDC7-209ENST00000539197 HIST3H2BBQ8N257 126 aa0.82□□□□□ -2.28
CCDC7-209ENST00000539197 SIGLECL1Q8N7X8 197 aa0.82□□□□□ -2.28
CCDC7-209ENST00000539197 MBD3L1Q8WWY6 194 aa0.82□□□□□ -2.28
CCDC7-209ENST00000539197 BTF3L4Q96K17 158 aa0.82□□□□□ -2.28
CCDC7-209ENST00000539197 C9orf16Q9BUW7 83 aa0.82□□□□□ -2.28
CCDC7-209ENST00000539197 PSTPIP2Q9H939 334 aa0.82□□□□□ -2.28
CCDC7-209ENST00000539197 NMNAT1Q9HAN9 279 aaPredicted RBP0.82□□□□□ -2.28
CCDC7-209ENST00000539197 OSTCQ9NRP0 149 aa0.82□□□□□ -2.28
CCDC7-209ENST00000539197 SETD5Q9C0A6 1442 aa0.81□□□□□ -2.28
CCDC7-209ENST00000539197 ADGRL3Q9HAR2 1447 aa0.81□□□□□ -2.28
CCDC7-209ENST00000539197 MEIKINA0A087WXM9 373 aa0.81□□□□□ -2.28
CCDC7-209ENST00000539197 IGKV3D-7A0A0C4DH55 119 aa0.81□□□□□ -2.28
CCDC7-209ENST00000539197 IGKV3OR2-268A0A0C4DH90 116 aa0.81□□□□□ -2.28
CCDC7-209ENST00000539197 ASAH2BP0C7U1 165 aa0.81□□□□□ -2.28
CCDC7-209ENST00000539197 CYBAP13498 195 aa0.81□□□□□ -2.28
CCDC7-209ENST00000539197 PPIBP23284 216 aaKnown RBP0.81□□□□□ -2.28
CCDC7-209ENST00000539197 S100A4P26447 101 aaKnown RBP0.81□□□□□ -2.28
CCDC7-209ENST00000539197 CASP1P29466 404 aa0.81□□□□□ -2.28
CCDC7-209ENST00000539197 HACD4Q5VWC8 232 aa0.81□□□□□ -2.28
CCDC7-209ENST00000539197 LCA10Q71F78 164 aa0.81□□□□□ -2.28
CCDC7-209ENST00000539197 OR4E2Q8NGC2 313 aa0.81□□□□□ -2.28
CCDC7-209ENST00000539197 WFDC5Q8TCV5 224 aa0.81□□□□□ -2.28
CCDC7-209ENST00000539197 PHB2Q99623 299 aa0.81□□□□□ -2.28
CCDC7-209ENST00000539197 SLC50A1Q9BRV3 221 aa0.81□□□□□ -2.28
CCDC7-209ENST00000539197 TVP23BQ9NYZ1 205 aa0.81□□□□□ -2.28
CCDC7-209ENST00000539197 OPTCQ9UBM4 332 aa0.81□□□□□ -2.28
CCDC7-209ENST00000539197 NEO1Q92859 1461 aa0.8□□□□□ -2.28
CCDC7-209ENST00000539197 ZFHX2Q9C0A1 2572 aaPredicted RBP0.8□□□□□ -2.28
CCDC7-209ENST00000539197 IGKV3-7A0A075B6H7 116 aa0.8□□□□□ -2.28
CCDC7-209ENST00000539197 TRAV1-1A0A0B4J248 108 aa0.8□□□□□ -2.28
CCDC7-209ENST00000539197 A0A0D9SG52 128 aa0.8□□□□□ -2.28
CCDC7-209ENST00000539197 OR5F1O95221 314 aa0.8□□□□□ -2.28
CCDC7-209ENST00000539197 ERP29P30040 261 aaKnown RBP0.8□□□□□ -2.28
CCDC7-209ENST00000539197 PRB3Q04118 309 aaPredicted RBP0.8□□□□□ -2.28
CCDC7-209ENST00000539197 CDK5R1Q15078 307 aa0.8□□□□□ -2.28
CCDC7-209ENST00000539197 TMED2Q15363 201 aa0.8□□□□□ -2.28
CCDC7-209ENST00000539197 RHEBQ15382 184 aa0.8□□□□□ -2.28
CCDC7-209ENST00000539197 TEX36Q5VZQ5 186 aa0.8□□□□□ -2.28
CCDC7-209ENST00000539197 ZNF826PQ6ZT77 177 aa0.8□□□□□ -2.28
CCDC7-209ENST00000539197 TRAPPC6BQ86SZ2 158 aa0.8□□□□□ -2.28
CCDC7-209ENST00000539197 Q8N2B8 174 aa0.8□□□□□ -2.28
CCDC7-209ENST00000539197 LINC00471Q8N535 108 aa0.8□□□□□ -2.28
CCDC7-209ENST00000539197 OR11H6Q8NGC7 330 aa0.8□□□□□ -2.28
CCDC7-209ENST00000539197 OR8D4Q8NGM9 314 aa0.8□□□□□ -2.28
CCDC7-209ENST00000539197 STAG3L4Q8TBR4 150 aa0.8□□□□□ -2.28
CCDC7-209ENST00000539197 GNPDA2Q8TDQ7 276 aa0.8□□□□□ -2.28
CCDC7-209ENST00000539197 AQP3Q92482 292 aa0.8□□□□□ -2.28
CCDC7-209ENST00000539197 ADAT3Q96EY9 351 aaPredicted RBP0.8□□□□□ -2.28
CCDC7-209ENST00000539197 CEP19Q96LK0 163 aa0.8□□□□□ -2.28
CCDC7-209ENST00000539197 C2orf50Q96LR7 162 aa0.8□□□□□ -2.28
CCDC7-209ENST00000539197 PARVBQ9HBI1 364 aa0.8□□□□□ -2.28
CCDC7-209ENST00000539197 DIDO1Q9BTC0 2240 aaKnown RBP0.8□□□□□ -2.28
CCDC7-209ENST00000539197 TOPBP1Q92547 1522 aa0.79□□□□□ -2.28
CCDC7-209ENST00000539197 TRAV14DV4A0A0A6YYC5 116 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms