RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 ETFRF1Q6IPR1 90 aa11.06□□□□□ -0.64
CD4-208ENST00000538827 ACSM6Q6P461 480 aa11.06□□□□□ -0.64
CD4-208ENST00000538827 ZNF329Q86UD4 541 aa11.06□□□□□ -0.64
CD4-208ENST00000538827 Q8N2B8 174 aa11.06□□□□□ -0.64
CD4-208ENST00000538827 HSD17B11Q8NBQ5 300 aa11.06□□□□□ -0.64
CD4-208ENST00000538827 FANCD2OSQ96PS1 177 aa11.06□□□□□ -0.64
CD4-208ENST00000538827 GON7Q9BXV9 100 aa11.06□□□□□ -0.64
CD4-208ENST00000538827 FNDC4Q9H6D8 234 aaPredicted RBP11.06□□□□□ -0.64
CD4-208ENST00000538827 THYN1Q9P016 225 aa11.06□□□□□ -0.64
CD4-208ENST00000538827 ZNF580Q9UK33 172 aa11.06□□□□□ -0.64
CD4-208ENST00000538827 MGAM2Q2M2H8 2515 aa11.05□□□□□ -0.64
CD4-208ENST00000538827 TSPAN9O75954 239 aa11.05□□□□□ -0.64
CD4-208ENST00000538827 NDUFB8O95169 186 aa11.05□□□□□ -0.64
CD4-208ENST00000538827 IGHV3-23P01764 117 aa11.05□□□□□ -0.64
CD4-208ENST00000538827 TPT1P13693 172 aaKnown RBP11.05□□□□□ -0.64
CD4-208ENST00000538827 RND2P52198 227 aa11.05□□□□□ -0.64
CD4-208ENST00000538827 SLC51BQ86UW2 128 aa11.05□□□□□ -0.64
CD4-208ENST00000538827 UBAC2Q8NBM4 344 aa11.05□□□□□ -0.64
CD4-208ENST00000538827 SCGB1C1Q8TD33 95 aa11.05□□□□□ -0.64
CD4-208ENST00000538827 CYTL1Q9NRR1 136 aa11.05□□□□□ -0.64
CD4-208ENST00000538827 MFSD2BA6NFX1 497 aa11.04□□□□□ -0.64
CD4-208ENST00000538827 H3BUA1 57 aa11.04□□□□□ -0.64
CD4-208ENST00000538827 I3L2K1 104 aa11.04□□□□□ -0.64
CD4-208ENST00000538827 K7EIM0 57 aa11.04□□□□□ -0.64
CD4-208ENST00000538827 JTBO76095 146 aa11.04□□□□□ -0.64
CD4-208ENST00000538827 PPIFP30405 207 aaKnown RBP11.04□□□□□ -0.64
CD4-208ENST00000538827 GPX4P36969 197 aaPredicted RBP11.04□□□□□ -0.64
CD4-208ENST00000538827 EIF5AP63241 154 aaKnown RBP11.04□□□□□ -0.64
CD4-208ENST00000538827 RUNX1Q01196 453 aa11.04□□□□□ -0.64
CD4-208ENST00000538827 CFHR3Q02985 330 aa11.04□□□□□ -0.64
CD4-208ENST00000538827 PVRIGQ6DKI7 326 aa11.04□□□□□ -0.64
CD4-208ENST00000538827 C10orf99Q6UWK7 81 aa11.04□□□□□ -0.64
CD4-208ENST00000538827 LCNL1Q6ZST4 164 aa11.04□□□□□ -0.64
CD4-208ENST00000538827 CENPVQ7Z7K6 275 aaPredicted RBP11.04□□□□□ -0.64
CD4-208ENST00000538827 ST8SIA2Q92186 375 aa11.04□□□□□ -0.64
CD4-208ENST00000538827 GGACTQ9BVM4 153 aa11.04□□□□□ -0.64
CD4-208ENST00000538827 SERTAD4Q9NUC0 356 aa11.04□□□□□ -0.64
CD4-208ENST00000538827 MRPL36Q9P0J6 103 aaKnown RBP11.04□□□□□ -0.64
CD4-208ENST00000538827 FAM223BA6NKX1 122 aa11.03□□□□□ -0.64
CD4-208ENST00000538827 GAMTQ14353 236 aa11.03□□□□□ -0.64
CD4-208ENST00000538827 VWC2Q2TAL6 325 aa11.03□□□□□ -0.64
CD4-208ENST00000538827 C15orf32Q32M92 178 aa11.03□□□□□ -0.64
CD4-208ENST00000538827 Q56UQ5 140 aa11.03□□□□□ -0.64
CD4-208ENST00000538827 BTNL8Q6UX41 500 aa11.03□□□□□ -0.64
CD4-208ENST00000538827 FAM223AQ8IWN6 122 aa11.03□□□□□ -0.64
CD4-208ENST00000538827 CACNG8Q8WXS5 425 aa11.03□□□□□ -0.64
CD4-208ENST00000538827 NPIPB3Q92617 1050 aa11.03□□□□□ -0.64
CD4-208ENST00000538827 WDR61Q9GZS3 305 aaKnown RBP11.03□□□□□ -0.64
CD4-208ENST00000538827 WDR83OSQ9Y284 106 aa11.03□□□□□ -0.64
CD4-208ENST00000538827 FNDC10F2Z333 226 aa11.02□□□□□ -0.65
CD4-208ENST00000538827 ATP5G2Q06055 141 aa11.02□□□□□ -0.65
CD4-208ENST00000538827 KHDC1LQ5JSQ8 128 aa11.02□□□□□ -0.65
CD4-208ENST00000538827 TREML4Q6UXN2 200 aa11.02□□□□□ -0.65
CD4-208ENST00000538827 KLHDC1Q8N7A1 406 aa11.02□□□□□ -0.65
CD4-208ENST00000538827 NECAP1Q8NC96 275 aa11.02□□□□□ -0.65
CD4-208ENST00000538827 STOML3Q8TAV4 291 aa11.02□□□□□ -0.65
CD4-208ENST00000538827 SCARB1Q8WTV0 552 aa11.02□□□□□ -0.65
CD4-208ENST00000538827 EEF1AKMT3Q96AZ1 226 aa11.02□□□□□ -0.65
CD4-208ENST00000538827 RSG1Q9BU20 258 aa11.02□□□□□ -0.65
CD4-208ENST00000538827 SH3BGRL3Q9H299 93 aa11.02□□□□□ -0.65
CD4-208ENST00000538827 SLA2Q9H6Q3 261 aa11.02□□□□□ -0.65
CD4-208ENST00000538827 NPVFQ9HCQ7 196 aa11.02□□□□□ -0.65
CD4-208ENST00000538827 C21orf62Q9NYP8 219 aa11.02□□□□□ -0.65
CD4-208ENST00000538827 TRBV9A0A0B4J1U6 114 aa11.01□□□□□ -0.65
CD4-208ENST00000538827 ZFP92A6NM28 416 aa11.01□□□□□ -0.65
CD4-208ENST00000538827 NDUFA7O95182 113 aa11.01□□□□□ -0.65
CD4-208ENST00000538827 IGLV1-40P01703 118 aa11.01□□□□□ -0.65
CD4-208ENST00000538827 IGHV3-11P01762 117 aa11.01□□□□□ -0.65
CD4-208ENST00000538827 IGHG4P01861 327 aa11.01□□□□□ -0.65
CD4-208ENST00000538827 MFAP4P55083 255 aa11.01□□□□□ -0.65
CD4-208ENST00000538827 TEX38Q6PEX7 206 aa11.01□□□□□ -0.65
CD4-208ENST00000538827 TEPPQ6URK8 271 aa11.01□□□□□ -0.65
CD4-208ENST00000538827 TMEM144Q7Z5S9 345 aa11.01□□□□□ -0.65
CD4-208ENST00000538827 BAP18Q8IXM2 172 aa11.01□□□□□ -0.65
CD4-208ENST00000538827 ZNF709Q8N972 641 aa11.01□□□□□ -0.65
CD4-208ENST00000538827 OR4F5Q8NH21 305 aa11.01□□□□□ -0.65
CD4-208ENST00000538827 CXorf58Q96LI9 332 aa11.01□□□□□ -0.65
CD4-208ENST00000538827 KLK15Q9H2R5 256 aa11.01□□□□□ -0.65
CD4-208ENST00000538827 C16orf95Q9H693 158 aa11.01□□□□□ -0.65
CD4-208ENST00000538827 C17orf112F2Z3M2 114 aa11□□□□□ -0.65
CD4-208ENST00000538827 GNG7O60262 68 aa11□□□□□ -0.65
CD4-208ENST00000538827 SCGB2A1O75556 95 aa11□□□□□ -0.65
CD4-208ENST00000538827 ATP6V0CP27449 155 aa11□□□□□ -0.65
CD4-208ENST00000538827 OR10J1P30954 320 aa11□□□□□ -0.65
CD4-208ENST00000538827 GPR183P32249 361 aa11□□□□□ -0.65
CD4-208ENST00000538827 ELLP55199 621 aaPredicted RBP11□□□□□ -0.65
CD4-208ENST00000538827 FOXE3Q13461 319 aa11□□□□□ -0.65
CD4-208ENST00000538827 OR4X2Q8NGF9 303 aa11□□□□□ -0.65
CD4-208ENST00000538827 VN1R17PQ8TDU5 208 aa11□□□□□ -0.65
CD4-208ENST00000538827 MGST2Q99735 147 aa11□□□□□ -0.65
CD4-208ENST00000538827 GINS3Q9BRX5 216 aa11□□□□□ -0.65
CD4-208ENST00000538827 NPCDR1Q9BY65 106 aa11□□□□□ -0.65
CD4-208ENST00000538827 PARD6GQ9BYG4 376 aaPredicted RBP11□□□□□ -0.65
CD4-208ENST00000538827 SLC25A32Q9H2D1 315 aa11□□□□□ -0.65
CD4-208ENST00000538827 GNB4Q9HAV0 340 aa11□□□□□ -0.65
CD4-208ENST00000538827 RFNGQ9Y644 331 aa11□□□□□ -0.65
CD4-208ENST00000538827 TMEM89A2RUT3 159 aa10.99□□□□□ -0.65
CD4-208ENST00000538827 AGPAT2O15120 278 aa10.99□□□□□ -0.65
CD4-208ENST00000538827 MPDU1O75352 247 aa10.99□□□□□ -0.65
CD4-208ENST00000538827 CLN5O75503 358 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms