RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 STXBP6Q8NFX7 210 aa10.11□□□□□ -0.79
SMARCA4-206ENST00000538456 S100ZQ8WXG8 99 aa10.11□□□□□ -0.79
SMARCA4-206ENST00000538456 ZNF2Q9BSG1 426 aaPredicted RBP10.11□□□□□ -0.79
SMARCA4-206ENST00000538456 AUNIPQ9H7T9 357 aa10.11□□□□□ -0.79
SMARCA4-206ENST00000538456 FKBP11Q9NYL4 201 aa10.11□□□□□ -0.79
SMARCA4-206ENST00000538456 TBC1D24Q9ULP9 559 aa10.11□□□□□ -0.79
SMARCA4-206ENST00000538456 PUS1Q9Y606 427 aaKnown RBP eCLIP10.11□□□□□ -0.79
SMARCA4-206ENST00000538456 TRAV2A0A0B4J234 112 aa10.1□□□□□ -0.79
SMARCA4-206ENST00000538456 S100A5P33763 92 aa10.1□□□□□ -0.79
SMARCA4-206ENST00000538456 RFX2P48378 723 aa10.1□□□□□ -0.79
SMARCA4-206ENST00000538456 C12orf74Q32Q52 190 aa10.1□□□□□ -0.79
SMARCA4-206ENST00000538456 TMEM41BQ5BJD5 291 aa10.1□□□□□ -0.79
SMARCA4-206ENST00000538456 ACTL10Q5JWF8 245 aa10.1□□□□□ -0.79
SMARCA4-206ENST00000538456 MORN3Q6PF18 240 aaPredicted RBP10.1□□□□□ -0.79
SMARCA4-206ENST00000538456 ZNF575Q86XF7 245 aa10.1□□□□□ -0.79
SMARCA4-206ENST00000538456 MOB3AQ96BX8 217 aa10.1□□□□□ -0.79
SMARCA4-206ENST00000538456 NDUFAF3Q9BU61 184 aa10.1□□□□□ -0.79
SMARCA4-206ENST00000538456 ZFAND3Q9H8U3 227 aa10.1□□□□□ -0.79
SMARCA4-206ENST00000538456 IFT46Q9NQC8 304 aa10.1□□□□□ -0.79
SMARCA4-206ENST00000538456 IGLV2-18A0A075B6J9 118 aa10.09□□□□□ -0.79
SMARCA4-206ENST00000538456 SPINK9Q5DT21 86 aa10.09□□□□□ -0.79
SMARCA4-206ENST00000538456 IDNKQ5T6J7 187 aa10.09□□□□□ -0.79
SMARCA4-206ENST00000538456 MZT2AQ6P582 158 aa10.09□□□□□ -0.79
SMARCA4-206ENST00000538456 CMTM1Q8IZ96 169 aa10.09□□□□□ -0.79
SMARCA4-206ENST00000538456 ZNF114Q8NC26 417 aa10.09□□□□□ -0.79
SMARCA4-206ENST00000538456 WDR12Q9GZL7 423 aaKnown RBP10.09□□□□□ -0.79
SMARCA4-206ENST00000538456 TMEM231Q9H6L2 316 aa10.09□□□□□ -0.79
SMARCA4-206ENST00000538456 A0A1B0GU03 582 aa10.08□□□□□ -0.8
SMARCA4-206ENST00000538456 K7EQG2 157 aa10.08□□□□□ -0.8
SMARCA4-206ENST00000538456 PMP2P02689 132 aa10.08□□□□□ -0.8
SMARCA4-206ENST00000538456 ETV6P41212 452 aa10.08□□□□□ -0.8
SMARCA4-206ENST00000538456 CBX5P45973 191 aa10.08□□□□□ -0.8
SMARCA4-206ENST00000538456 PRCDQ00LT1 54 aa10.08□□□□□ -0.8
SMARCA4-206ENST00000538456 ZNF846Q147U1 533 aa10.08□□□□□ -0.8
SMARCA4-206ENST00000538456 PHLDA2Q53GA4 152 aa10.08□□□□□ -0.8
SMARCA4-206ENST00000538456 ZNF600Q6ZNG1 722 aa10.08□□□□□ -0.8
SMARCA4-206ENST00000538456 CADM3Q8N126 398 aa10.08□□□□□ -0.8
SMARCA4-206ENST00000538456 OR4A16Q8NH70 328 aa10.08□□□□□ -0.8
SMARCA4-206ENST00000538456 FXYD6Q9H0Q3 95 aa10.08□□□□□ -0.8
SMARCA4-206ENST00000538456 DIABLOQ9NR28 239 aa10.08□□□□□ -0.8
SMARCA4-206ENST00000538456 A0A0A6YYH2 397 aa10.07□□□□□ -0.8
SMARCA4-206ENST00000538456 A6NJ64 397 aa10.07□□□□□ -0.8
SMARCA4-206ENST00000538456 GPR31O00270 319 aa10.07□□□□□ -0.8
SMARCA4-206ENST00000538456 CTDSP2O14595 271 aa10.07□□□□□ -0.8
SMARCA4-206ENST00000538456 NPPCP23582 126 aa10.07□□□□□ -0.8
SMARCA4-206ENST00000538456 NPBWR1P48145 328 aa10.07□□□□□ -0.8
SMARCA4-206ENST00000538456 DHRS11Q6UWP2 260 aa10.07□□□□□ -0.8
SMARCA4-206ENST00000538456 H2BFWTQ7Z2G1 175 aa10.07□□□□□ -0.8
SMARCA4-206ENST00000538456 CCDC190Q86UF4 302 aa10.07□□□□□ -0.8
SMARCA4-206ENST00000538456 UBE2DNLQ8IWF7 75 aa10.07□□□□□ -0.8
SMARCA4-206ENST00000538456 CSNK1G2-AS1Q8NCQ2 148 aa10.07□□□□□ -0.8
SMARCA4-206ENST00000538456 HSPG2P98160 4391 aa10.06□□□□□ -0.8
SMARCA4-206ENST00000538456 RGS5O15539 181 aa10.06□□□□□ -0.8
SMARCA4-206ENST00000538456 IFNA10P01566 189 aa10.06□□□□□ -0.8
SMARCA4-206ENST00000538456 P2RY1P47900 373 aa10.06□□□□□ -0.8
SMARCA4-206ENST00000538456 PPP5CP53041 499 aa10.06□□□□□ -0.8
SMARCA4-206ENST00000538456 SCAND1P57086 179 aa10.06□□□□□ -0.8
SMARCA4-206ENST00000538456 ERHP84090 104 aaKnown RBP10.06□□□□□ -0.8
SMARCA4-206ENST00000538456 LGALS9BQ3B8N2 356 aa10.06□□□□□ -0.8
SMARCA4-206ENST00000538456 OR5H2Q8NGV7 314 aa10.06□□□□□ -0.8
SMARCA4-206ENST00000538456 GRAMD2BQ96HH9 432 aa10.06□□□□□ -0.8
SMARCA4-206ENST00000538456 SEC22AQ96IW7 307 aa10.06□□□□□ -0.8
SMARCA4-206ENST00000538456 METTL26Q96S19 204 aa10.06□□□□□ -0.8
SMARCA4-206ENST00000538456 MIXL1Q9H2W2 232 aa10.06□□□□□ -0.8
SMARCA4-206ENST00000538456 PLA2G2EQ9NZK7 142 aa10.06□□□□□ -0.8
SMARCA4-206ENST00000538456 A0A1W2PS18 150 aa10.05□□□□□ -0.8
SMARCA4-206ENST00000538456 TNFSF8P32971 234 aa10.05□□□□□ -0.8
SMARCA4-206ENST00000538456 IZUMO4Q1ZYL8 232 aa10.05□□□□□ -0.8
SMARCA4-206ENST00000538456 PSMG4Q5JS54 123 aa10.05□□□□□ -0.8
SMARCA4-206ENST00000538456 SPANXN2Q5MJ10 180 aa10.05□□□□□ -0.8
SMARCA4-206ENST00000538456 DCANP1Q8TF63 244 aa10.05□□□□□ -0.8
SMARCA4-206ENST00000538456 MRGPRFQ96AM1 343 aa10.05□□□□□ -0.8
SMARCA4-206ENST00000538456 XCL2Q9UBD3 114 aa10.05□□□□□ -0.8
SMARCA4-206ENST00000538456 COMMD3Q9UBI1 195 aa10.05□□□□□ -0.8
SMARCA4-206ENST00000538456 TMEM50AO95807 157 aa10.04□□□□□ -0.8
SMARCA4-206ENST00000538456 IFNA21P01568 189 aa10.04□□□□□ -0.8
SMARCA4-206ENST00000538456 IFNA17P01571 189 aa10.04□□□□□ -0.8
SMARCA4-206ENST00000538456 IGKV1-39P01597 117 aa10.04□□□□□ -0.8
SMARCA4-206ENST00000538456 IGKV1D-39P04432 117 aa10.04□□□□□ -0.8
SMARCA4-206ENST00000538456 NPY1RP25929 384 aa10.04□□□□□ -0.8
SMARCA4-206ENST00000538456 SNCAP37840 140 aa10.04□□□□□ -0.8
SMARCA4-206ENST00000538456 TAS2R46P59540 309 aa10.04□□□□□ -0.8
SMARCA4-206ENST00000538456 HSPE1P61604 102 aaKnown RBP10.04□□□□□ -0.8
SMARCA4-206ENST00000538456 DHRS2Q13268 280 aa10.04□□□□□ -0.8
SMARCA4-206ENST00000538456 TBC1D26Q86UD7 250 aa10.04□□□□□ -0.8
SMARCA4-206ENST00000538456 OR6F1Q8NGZ6 308 aa10.04□□□□□ -0.8
SMARCA4-206ENST00000538456 RAB40CQ96S21 281 aa10.04□□□□□ -0.8
SMARCA4-206ENST00000538456 MRPL36Q9P0J6 103 aaKnown RBP10.04□□□□□ -0.8
SMARCA4-206ENST00000538456 HELTA6NFD8 242 aa10.03□□□□□ -0.8
SMARCA4-206ENST00000538456 HPGDSO60760 199 aa10.03□□□□□ -0.8
SMARCA4-206ENST00000538456 APOA1P02647 267 aa10.03□□□□□ -0.8
SMARCA4-206ENST00000538456 CRYBB3P26998 211 aa10.03□□□□□ -0.8
SMARCA4-206ENST00000538456 S100GP29377 79 aa10.03□□□□□ -0.8
SMARCA4-206ENST00000538456 HRH1P35367 487 aa10.03□□□□□ -0.8
SMARCA4-206ENST00000538456 EMP1P54849 157 aa10.03□□□□□ -0.8
SMARCA4-206ENST00000538456 Q6ZR54 194 aa10.03□□□□□ -0.8
SMARCA4-206ENST00000538456 TMEM230Q96A57 120 aa10.03□□□□□ -0.8
SMARCA4-206ENST00000538456 NARS2Q96I59 477 aaKnown RBP10.03□□□□□ -0.8
SMARCA4-206ENST00000538456 V9GYH0 126 aa10.03□□□□□ -0.8
SMARCA4-206ENST00000538456 NACAE9PAV3 2078 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms