RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 TEX38Q6PEX7 206 aa8.38□□□□□ -1.07
TNFRSF1A-211ENST00000538363 Q6ZS46 218 aa8.38□□□□□ -1.07
TNFRSF1A-211ENST00000538363 C19orf35Q6ZS72 473 aa8.38□□□□□ -1.07
TNFRSF1A-211ENST00000538363 ZNF329Q86UD4 541 aa8.38□□□□□ -1.07
TNFRSF1A-211ENST00000538363 HSD17B11Q8NBQ5 300 aa8.38□□□□□ -1.07
TNFRSF1A-211ENST00000538363 OR4F5Q8NH21 305 aa8.38□□□□□ -1.07
TNFRSF1A-211ENST00000538363 EEF1AKMT3Q96AZ1 226 aa8.38□□□□□ -1.07
TNFRSF1A-211ENST00000538363 BSCL2Q96G97 398 aaPredicted RBP8.38□□□□□ -1.07
TNFRSF1A-211ENST00000538363 CXorf58Q96LI9 332 aa8.38□□□□□ -1.07
TNFRSF1A-211ENST00000538363 SLA2Q9H6Q3 261 aa8.38□□□□□ -1.07
TNFRSF1A-211ENST00000538363 ZNF702PQ9H963 129 aa8.38□□□□□ -1.07
TNFRSF1A-211ENST00000538363 ESM1Q9NQ30 184 aa8.38□□□□□ -1.07
TNFRSF1A-211ENST00000538363 PLXNB1O43157 2135 aa8.38□□□□□ -1.07
TNFRSF1A-211ENST00000538363 TNCP24821 2201 aa8.37□□□□□ -1.07
TNFRSF1A-211ENST00000538363 H3BUA1 57 aa8.37□□□□□ -1.07
TNFRSF1A-211ENST00000538363 ARL16Q0P5N6 197 aa8.37□□□□□ -1.07
TNFRSF1A-211ENST00000538363 MLANAQ16655 118 aa8.37□□□□□ -1.07
TNFRSF1A-211ENST00000538363 ASPHD1Q5U4P2 390 aa8.37□□□□□ -1.07
TNFRSF1A-211ENST00000538363 BTNL8Q6UX41 500 aa8.37□□□□□ -1.07
TNFRSF1A-211ENST00000538363 Q6ZSV7 163 aa8.37□□□□□ -1.07
TNFRSF1A-211ENST00000538363 NECAP1Q8NC96 275 aa8.37□□□□□ -1.07
TNFRSF1A-211ENST00000538363 NPIPB3Q92617 1050 aa8.37□□□□□ -1.07
TNFRSF1A-211ENST00000538363 GNPNAT1Q96EK6 184 aaPredicted RBP8.37□□□□□ -1.07
TNFRSF1A-211ENST00000538363 GNB4Q9HAV0 340 aa8.37□□□□□ -1.07
TNFRSF1A-211ENST00000538363 KCNIP2Q9NS61 270 aa8.37□□□□□ -1.07
TNFRSF1A-211ENST00000538363 GAR1Q9NY12 217 aaKnown RBP8.37□□□□□ -1.07
TNFRSF1A-211ENST00000538363 C21orf62Q9NYP8 219 aa8.37□□□□□ -1.07
TNFRSF1A-211ENST00000538363 S4R3C0 116 aa8.37□□□□□ -1.07
TNFRSF1A-211ENST00000538363 NAV3Q8IVL0 2385 aa8.36□□□□□ -1.07
TNFRSF1A-211ENST00000538363 FAM223BA6NKX1 122 aa8.36□□□□□ -1.07
TNFRSF1A-211ENST00000538363 MPDU1O75352 247 aa8.36□□□□□ -1.07
TNFRSF1A-211ENST00000538363 NDUFB8O95169 186 aa8.36□□□□□ -1.07
TNFRSF1A-211ENST00000538363 IFNA7P01567 189 aa8.36□□□□□ -1.07
TNFRSF1A-211ENST00000538363 IGHV3-23P01764 117 aa8.36□□□□□ -1.07
TNFRSF1A-211ENST00000538363 RND2P52198 227 aa8.36□□□□□ -1.07
TNFRSF1A-211ENST00000538363 CRIP2P52943 208 aaPredicted RBP8.36□□□□□ -1.07
TNFRSF1A-211ENST00000538363 C15orf32Q32M92 178 aa8.36□□□□□ -1.07
TNFRSF1A-211ENST00000538363 BSXQ3C1V8 233 aa8.36□□□□□ -1.07
TNFRSF1A-211ENST00000538363 LAMTOR1Q6IAA8 161 aa8.36□□□□□ -1.07
TNFRSF1A-211ENST00000538363 TEPPQ6URK8 271 aa8.36□□□□□ -1.07
TNFRSF1A-211ENST00000538363 HAPLN4Q86UW8 402 aa8.36□□□□□ -1.07
TNFRSF1A-211ENST00000538363 FAM223AQ8IWN6 122 aa8.36□□□□□ -1.07
TNFRSF1A-211ENST00000538363 BAP18Q8IXM2 172 aa8.36□□□□□ -1.07
TNFRSF1A-211ENST00000538363 COMMD1Q8N668 190 aa8.36□□□□□ -1.07
TNFRSF1A-211ENST00000538363 OR4X2Q8NGF9 303 aa8.36□□□□□ -1.07
TNFRSF1A-211ENST00000538363 USMG5Q96IX5 58 aa8.36□□□□□ -1.07
TNFRSF1A-211ENST00000538363 IGLV11-55A0A075B6I3 123 aa8.35□□□□□ -1.07
TNFRSF1A-211ENST00000538363 TRAV30A0A087WSZ9 112 aa8.35□□□□□ -1.07
TNFRSF1A-211ENST00000538363 PMS2P5A8MQ11 134 aa8.35□□□□□ -1.07
TNFRSF1A-211ENST00000538363 FNDC10F2Z333 226 aa8.35□□□□□ -1.07
TNFRSF1A-211ENST00000538363 NUPL2O15504 423 aaKnown RBP8.35□□□□□ -1.07
TNFRSF1A-211ENST00000538363 CAMLGP49069 296 aa8.35□□□□□ -1.07
TNFRSF1A-211ENST00000538363 MFAP2P55001 183 aa8.35□□□□□ -1.07
TNFRSF1A-211ENST00000538363 RAB14P61106 215 aa8.35□□□□□ -1.07
TNFRSF1A-211ENST00000538363 DEFA5Q01523 94 aa8.35□□□□□ -1.07
TNFRSF1A-211ENST00000538363 GAMTQ14353 236 aa8.35□□□□□ -1.07
TNFRSF1A-211ENST00000538363 AKR1C8PQ5T2L2 129 aa8.35□□□□□ -1.07
TNFRSF1A-211ENST00000538363 TMEM144Q7Z5S9 345 aa8.35□□□□□ -1.07
TNFRSF1A-211ENST00000538363 OR5AU1Q8NGC0 362 aa8.35□□□□□ -1.07
TNFRSF1A-211ENST00000538363 OR2G3Q8NGZ4 309 aa8.35□□□□□ -1.07
TNFRSF1A-211ENST00000538363 VN1R17PQ8TDU5 208 aa8.35□□□□□ -1.07
TNFRSF1A-211ENST00000538363 SCARB1Q8WTV0 552 aa8.35□□□□□ -1.07
TNFRSF1A-211ENST00000538363 TMEM170AQ8WVE7 144 aa8.35□□□□□ -1.07
TNFRSF1A-211ENST00000538363 ST8SIA2Q92186 375 aa8.35□□□□□ -1.07
TNFRSF1A-211ENST00000538363 WFDC1Q9HC57 220 aa8.35□□□□□ -1.07
TNFRSF1A-211ENST00000538363 ANK3Q12955 4377 aaKnown RBP8.34□□□□□ -1.07
TNFRSF1A-211ENST00000538363 NF1P21359 2839 aa8.34□□□□□ -1.07
TNFRSF1A-211ENST00000538363 TRBV7-1A0A0A6YYK4 115 aa8.34□□□□□ -1.07
TNFRSF1A-211ENST00000538363 TMEM89A2RUT3 159 aa8.34□□□□□ -1.07
TNFRSF1A-211ENST00000538363 NUDT19A8MXV4 375 aa8.34□□□□□ -1.07
TNFRSF1A-211ENST00000538363 IGHV3-11P01762 117 aa8.34□□□□□ -1.07
TNFRSF1A-211ENST00000538363 ELANEP08246 267 aa8.34□□□□□ -1.07
TNFRSF1A-211ENST00000538363 OR10J1P30954 320 aa8.34□□□□□ -1.07
TNFRSF1A-211ENST00000538363 RAB9AP51151 201 aa8.34□□□□□ -1.07
TNFRSF1A-211ENST00000538363 Q6ZRG5 221 aa8.34□□□□□ -1.07
TNFRSF1A-211ENST00000538363 KLHDC1Q8N7A1 406 aa8.34□□□□□ -1.07
TNFRSF1A-211ENST00000538363 TAF15Q92804 592 aaKnown RBP eCLIP8.34□□□□□ -1.07
TNFRSF1A-211ENST00000538363 TXN2Q99757 166 aa8.34□□□□□ -1.07
TNFRSF1A-211ENST00000538363 WDR61Q9GZS3 305 aaKnown RBP8.34□□□□□ -1.07
TNFRSF1A-211ENST00000538363 SLC25A32Q9H2D1 315 aa8.34□□□□□ -1.07
TNFRSF1A-211ENST00000538363 ZNF580Q9UK33 172 aa8.34□□□□□ -1.07
TNFRSF1A-211ENST00000538363 RNF114Q9Y508 228 aa8.34□□□□□ -1.07
TNFRSF1A-211ENST00000538363 TCRBV4S1A1TA0A5B7 111 aa8.33□□□□□ -1.08
TNFRSF1A-211ENST00000538363 ANKRD34BA5PLL1 514 aa8.33□□□□□ -1.08
TNFRSF1A-211ENST00000538363 I3L2K1 104 aa8.33□□□□□ -1.08
TNFRSF1A-211ENST00000538363 CLN5O75503 358 aa8.33□□□□□ -1.08
TNFRSF1A-211ENST00000538363 YIF1AO95070 293 aa8.33□□□□□ -1.08
TNFRSF1A-211ENST00000538363 NDUFA7O95182 113 aa8.33□□□□□ -1.08
TNFRSF1A-211ENST00000538363 ATP6V0CP27449 155 aa8.33□□□□□ -1.08
TNFRSF1A-211ENST00000538363 PPIFP30405 207 aaKnown RBP8.33□□□□□ -1.08
TNFRSF1A-211ENST00000538363 ELLP55199 621 aaPredicted RBP8.33□□□□□ -1.08
TNFRSF1A-211ENST00000538363 SRSF2Q01130 221 aaKnown RBP8.33□□□□□ -1.08
TNFRSF1A-211ENST00000538363 RUNX1Q01196 453 aa8.33□□□□□ -1.08
TNFRSF1A-211ENST00000538363 ZNF616Q08AN1 781 aa8.33□□□□□ -1.08
TNFRSF1A-211ENST00000538363 FOXE3Q13461 319 aa8.33□□□□□ -1.08
TNFRSF1A-211ENST00000538363 FAM209BQ5JX69 171 aa8.33□□□□□ -1.08
TNFRSF1A-211ENST00000538363 FFAR4Q5NUL3 377 aa8.33□□□□□ -1.08
TNFRSF1A-211ENST00000538363 CLEC19AQ6UXS0 136 aa8.33□□□□□ -1.08
TNFRSF1A-211ENST00000538363 Q8N2B8 174 aa8.33□□□□□ -1.08
TNFRSF1A-211ENST00000538363 BPIFCQ8NFQ6 507 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms