RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 NHLH1Q02575 133 aa12.76□□□□□ -0.37
CHFR-213ENST00000536843 GABRA6Q16445 453 aa12.76□□□□□ -0.37
CHFR-213ENST00000536843 OR1N2Q8NGR9 330 aa12.76□□□□□ -0.37
CHFR-213ENST00000536843 FNDC4Q9H6D8 234 aaPredicted RBP12.76□□□□□ -0.37
CHFR-213ENST00000536843 SMPXQ9UHP9 88 aa12.76□□□□□ -0.37
CHFR-213ENST00000536843 DUSP13Q9UII6 198 aa12.76□□□□□ -0.37
CHFR-213ENST00000536843 POLDIP2Q9Y2S7 368 aa12.76□□□□□ -0.37
CHFR-213ENST00000536843 AHRRA9YTQ3 701 aa12.76□□□□□ -0.37
CHFR-213ENST00000536843 PPIAL4GP0DN37 164 aa12.76□□□□□ -0.37
CHFR-213ENST00000536843 CD46P15529 392 aa12.76□□□□□ -0.37
CHFR-213ENST00000536843 TMEM97Q5BJF2 176 aa12.76□□□□□ -0.37
CHFR-213ENST00000536843 NHLRC2Q8NBF2 726 aa12.76□□□□□ -0.37
CHFR-213ENST00000536843 H1FXQ92522 213 aaKnown RBP12.76□□□□□ -0.37
CHFR-213ENST00000536843 SNRNP40Q96DI7 357 aaKnown RBP12.76□□□□□ -0.37
CHFR-213ENST00000536843 JMJD8Q96S16 334 aa12.76□□□□□ -0.37
CHFR-213ENST00000536843 PLEKHA3Q9HB20 300 aa12.76□□□□□ -0.37
CHFR-213ENST00000536843 GCM1Q9NP62 436 aa12.76□□□□□ -0.37
CHFR-213ENST00000536843 SPRR3Q9UBC9 169 aa12.76□□□□□ -0.37
CHFR-213ENST00000536843 FNDC10F2Z333 226 aa12.75□□□□□ -0.37
CHFR-213ENST00000536843 IGFBP2P18065 325 aa12.75□□□□□ -0.37
CHFR-213ENST00000536843 HTR1DP28221 377 aa12.75□□□□□ -0.37
CHFR-213ENST00000536843 C16orf54Q6UWD8 224 aa12.75□□□□□ -0.37
CHFR-213ENST00000536843 WDR86Q86TI4 376 aa12.75□□□□□ -0.37
CHFR-213ENST00000536843 NABP2Q9BQ15 211 aa12.75□□□□□ -0.37
CHFR-213ENST00000536843 PPIAL4DF5H284 164 aa12.74□□□□□ -0.37
CHFR-213ENST00000536843 LIPFP07098 398 aa12.74□□□□□ -0.37
CHFR-213ENST00000536843 MDP1Q86V88 176 aa12.74□□□□□ -0.37
CHFR-213ENST00000536843 AP1S3Q96PC3 154 aa12.74□□□□□ -0.37
CHFR-213ENST00000536843 RTL8AQ9BWD3 113 aa12.74□□□□□ -0.37
CHFR-213ENST00000536843 MAP1LC3CQ9BXW4 147 aa12.74□□□□□ -0.37
CHFR-213ENST00000536843 IDI2-AS1Q9NZ38 188 aa12.74□□□□□ -0.37
CHFR-213ENST00000536843 FAM186AA6NE01 2351 aa12.74□□□□□ -0.37
CHFR-213ENST00000536843 DOCK7Q96N67 2140 aa12.74□□□□□ -0.37
CHFR-213ENST00000536843 PSPNO60542 156 aa12.74□□□□□ -0.37
CHFR-213ENST00000536843 FOXF2Q12947 444 aa12.74□□□□□ -0.37
CHFR-213ENST00000536843 PIP4P1Q86T03 277 aa12.74□□□□□ -0.37
CHFR-213ENST00000536843 BPIFA4PQ86YQ2 179 aa12.74□□□□□ -0.37
CHFR-213ENST00000536843 Q8TCH9 128 aa12.74□□□□□ -0.37
CHFR-213ENST00000536843 COL25A1Q9BXS0 654 aaPredicted RBP12.74□□□□□ -0.37
CHFR-213ENST00000536843 TCF19Q9Y242 345 aa12.74□□□□□ -0.37
CHFR-213ENST00000536843 TRGV5A0A0B4J1U4 118 aa12.73□□□□□ -0.37
CHFR-213ENST00000536843 HIGD1CA8MV81 97 aa12.73□□□□□ -0.37
CHFR-213ENST00000536843 CAMPP49913 170 aa12.73□□□□□ -0.37
CHFR-213ENST00000536843 TAS2R45P59539 299 aa12.73□□□□□ -0.37
CHFR-213ENST00000536843 PSG3Q16557 428 aa12.73□□□□□ -0.37
CHFR-213ENST00000536843 ZNF766Q5HY98 468 aa12.73□□□□□ -0.37
CHFR-213ENST00000536843 CLUHP3Q96NS8 147 aa12.73□□□□□ -0.37
CHFR-213ENST00000536843 ESPL1Q14674 2120 aa12.73□□□□□ -0.37
CHFR-213ENST00000536843 HAND1O96004 215 aa12.73□□□□□ -0.37
CHFR-213ENST00000536843 LINC01545Q5VT33 79 aa12.73□□□□□ -0.37
CHFR-213ENST00000536843 OTOGLQ3ZCN5 2332 aa12.73□□□□□ -0.37
CHFR-213ENST00000536843 A6NDN8 102 aa12.72□□□□□ -0.37
CHFR-213ENST00000536843 VWC2LB2RUY7 222 aa12.72□□□□□ -0.37
CHFR-213ENST00000536843 FCGR3BO75015 233 aa12.72□□□□□ -0.37
CHFR-213ENST00000536843 NBL1P41271 181 aa12.72□□□□□ -0.37
CHFR-213ENST00000536843 SSX8Q7RTT4 187 aa12.72□□□□□ -0.37
CHFR-213ENST00000536843 OR5A1Q8NGJ0 315 aa12.72□□□□□ -0.37
CHFR-213ENST00000536843 FAM216AQ8WUB2 273 aa12.72□□□□□ -0.37
CHFR-213ENST00000536843 C19orf24Q9BVV8 132 aa12.72□□□□□ -0.37
CHFR-213ENST00000536843 PSG11Q9UQ72 335 aa12.72□□□□□ -0.37
CHFR-213ENST00000536843 HIST1H1EP10412 219 aaKnown RBP12.72□□□□□ -0.37
CHFR-213ENST00000536843 ERVK-16P61578 105 aa12.72□□□□□ -0.37
CHFR-213ENST00000536843 HBBP68871 147 aa12.72□□□□□ -0.37
CHFR-213ENST00000536843 OR2K2Q8NGT1 345 aa12.72□□□□□ -0.37
CHFR-213ENST00000536843 NPFFR1Q9GZQ6 430 aa12.72□□□□□ -0.37
CHFR-213ENST00000536843 FOXE3Q13461 319 aa12.71□□□□□ -0.37
CHFR-213ENST00000536843 ASPHD1Q5U4P2 390 aa12.71□□□□□ -0.37
CHFR-213ENST00000536843 HSPB8Q9UJY1 196 aa12.71□□□□□ -0.37
CHFR-213ENST00000536843 OR10AG1Q8NH19 301 aa12.71□□□□□ -0.38
CHFR-213ENST00000536843 LRRC29Q8WV35 223 aa12.71□□□□□ -0.38
CHFR-213ENST00000536843 JKAMPQ9P055 326 aa12.71□□□□□ -0.38
CHFR-213ENST00000536843 TRAV3A0A0B4J244 114 aa12.7□□□□□ -0.38
CHFR-213ENST00000536843 H3BUT2 72 aa12.7□□□□□ -0.38
CHFR-213ENST00000536843 GNG7O60262 68 aa12.7□□□□□ -0.38
CHFR-213ENST00000536843 APOA2P02652 100 aa12.7□□□□□ -0.38
CHFR-213ENST00000536843 CEBPDP49716 269 aaPredicted RBP12.7□□□□□ -0.38
CHFR-213ENST00000536843 AESQ08117 197 aa12.7□□□□□ -0.38
CHFR-213ENST00000536843 NANOS1Q8WY41 292 aaKnown RBP12.7□□□□□ -0.38
CHFR-213ENST00000536843 LINC00479Q96M42 142 aa12.7□□□□□ -0.38
CHFR-213ENST00000536843 C7orf69Q9H7B7 122 aa12.7□□□□□ -0.38
CHFR-213ENST00000536843 SH3BGRL2Q9UJC5 107 aa12.7□□□□□ -0.38
CHFR-213ENST00000536843 URB1O60287 2271 aaKnown RBP12.7□□□□□ -0.38
CHFR-213ENST00000536843 PROP1O75360 226 aa12.7□□□□□ -0.38
CHFR-213ENST00000536843 C8orf88P0DMB2 117 aa12.7□□□□□ -0.38
CHFR-213ENST00000536843 FOXA3P55318 350 aaPredicted RBP12.7□□□□□ -0.38
CHFR-213ENST00000536843 TRAT1Q6PIZ9 186 aa12.7□□□□□ -0.38
CHFR-213ENST00000536843 DPF1Q92782 380 aa12.7□□□□□ -0.38
CHFR-213ENST00000536843 COQ2Q96H96 371 aa12.7□□□□□ -0.38
CHFR-213ENST00000536843 TMEM140Q9NV12 185 aa12.7□□□□□ -0.38
CHFR-213ENST00000536843 PTPRBP23467 1997 aa12.69□□□□□ -0.38
CHFR-213ENST00000536843 A0A0G2JLM5 398 aa12.69□□□□□ -0.38
CHFR-213ENST00000536843 Q6ZR03 302 aa12.69□□□□□ -0.38
CHFR-213ENST00000536843 VKORC1L1Q8N0U8 176 aa12.69□□□□□ -0.38
CHFR-213ENST00000536843 SOX21Q9Y651 276 aaPredicted RBP12.69□□□□□ -0.38
CHFR-213ENST00000536843 ASPMQ8IZT6 3477 aa12.69□□□□□ -0.38
CHFR-213ENST00000536843 PCNX2A6NKB5 2137 aa12.69□□□□□ -0.38
CHFR-213ENST00000536843 IGHV3-43A0A0B4J1X8 118 aa12.69□□□□□ -0.38
CHFR-213ENST00000536843 A0A1B0GV72 72 aa12.69□□□□□ -0.38
CHFR-213ENST00000536843 C15orf61A6NNL5 157 aa12.69□□□□□ -0.38
CHFR-213ENST00000536843 IGHV3-43DP0DP04 118 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms