RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 VGLL1Q99990 258 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 TXNIPQ9H3M7 391 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 GCM1Q9NP62 436 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 TPSG1Q9NRR2 321 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 IGHV3-64DA0A0J9YX35 117 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 A6NDN8 102 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 MS4A18H0YCH9 400 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 PRRG2O14669 202 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 LTAP01374 205 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 HBZP02008 142 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 PATE4P0C8F1 98 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 COX8AP10176 69 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 FGF6P10767 208 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 GABRG2P18507 467 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 CSN1S1P47710 185 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 GNG3P63215 75 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 ZNF816Q0VGE8 651 aaPredicted RBP3.06□□□□□ -1.92
MCF2-210ENST00000536274 SRSF6Q13247 344 aaKnown RBP3.06□□□□□ -1.92
MCF2-210ENST00000536274 MS4A18Q3C1V0 323 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 RNF152Q8N8N0 203 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 TMEM178AQ8NBL3 297 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 OR8A1Q8NGG7 326 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 ASCL2Q99929 193 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 TIMM29Q9BSF4 260 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 HEYLQ9NQ87 328 aaPredicted RBP3.06□□□□□ -1.92
MCF2-210ENST00000536274 LINC00312Q9Y6C7 94 aa3.06□□□□□ -1.92
MCF2-210ENST00000536274 USF3Q68DE3 2245 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 AGRNO00468 2067 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 NCKAP5O14513 1909 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 PCSK5Q92824 1860 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 FAM208BQ5VWN6 2430 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 A0A1W2PQF6 199 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 COX5AP20674 150 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 F2RP25116 425 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 G6PCP35575 357 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 HBG1P69891 147 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 HBG2P69892 147 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 SRSF2Q01130 221 aaKnown RBP3.05□□□□□ -1.92
MCF2-210ENST00000536274 LOXL1Q08397 574 aaPredicted RBP3.05□□□□□ -1.92
MCF2-210ENST00000536274 PSG5Q15238 335 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 RTL8BQ17RB0 113 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 PDLIM3Q53GG5 364 aaPredicted RBP3.05□□□□□ -1.92
MCF2-210ENST00000536274 EMC4Q5J8M3 183 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 XP32Q5T750 250 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 Q71RC1 249 aaPredicted RBP3.05□□□□□ -1.92
MCF2-210ENST00000536274 FADS6Q8N9I5 356 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 OR5AN1Q8NGI8 311 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 OR5A1Q8NGJ0 315 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 PRELID3AQ96N28 172 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 LSM7Q9UK45 103 aaKnown RBP3.05□□□□□ -1.92
MCF2-210ENST00000536274 TRAPPC2LQ9UL33 140 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 INTS1Q8N201 2190 aaKnown RBP3.05□□□□□ -1.92
MCF2-210ENST00000536274 A0A087WX48 190 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 A0A1W2PRD5 423 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 A0A1W2PRF3 423 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 A0A1W2PRM7 423 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 TMEM189A5PLL7 270 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 H0YGG7 62 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 CRLF1O75462 422 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 UTS2O95399 124 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 APOMO95445 188 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 P04436 131 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 GLRXP35754 106 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 ECI1P42126 302 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 GNG4P50150 75 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 SEC11AP67812 179 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 FAM159AQ6UWV7 190 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 FOXI2Q6ZQN5 318 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 PPP1R32Q7Z5V6 425 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 BCL6BQ8N143 479 aaPredicted RBP3.05□□□□□ -1.92
MCF2-210ENST00000536274 HOXB13Q92826 284 aaPredicted RBP3.05□□□□□ -1.92
MCF2-210ENST00000536274 RERGQ96A58 199 aaPredicted RBP3.05□□□□□ -1.92
MCF2-210ENST00000536274 TAAR6Q96RI8 345 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 TMEM191AQ9H0A3 160 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 KCNIP2Q9NS61 270 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 TMED7-TICAM2A0A0A6YYA0 188 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 TRAV5A0A0B4J249 113 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 HOXA4Q00056 320 aaPredicted RBP3.05□□□□□ -1.92
MCF2-210ENST00000536274 SRSF1Q07955 248 aaKnown RBP eCLIP3.05□□□□□ -1.92
MCF2-210ENST00000536274 DAZAP2Q15038 168 aaPredicted RBP3.05□□□□□ -1.92
MCF2-210ENST00000536274 COX19Q49B96 90 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 LY6G5CQ5SRR4 150 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 IBA57Q5T440 356 aaKnown RBP3.05□□□□□ -1.92
MCF2-210ENST00000536274 FA2HQ7L5A8 372 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 Q8N7P7 452 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 NUP35Q8NFH5 326 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 DAZAP1Q96EP5 407 aaKnown RBP3.05□□□□□ -1.92
MCF2-210ENST00000536274 ZNF488Q96MN9 340 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 MOB1AQ9H8S9 216 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 DEC1Q9P2X7 70 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 RAXQ9Y2V3 346 aa3.05□□□□□ -1.92
MCF2-210ENST00000536274 CPAMD8Q8IZJ3 1885 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 TMEM131Q92545 1883 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 ARFGEF3Q5TH69 2177 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 PLCE1Q9P212 2302 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 LOC389332A0A1B0GUA5 103 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 A1L4Q6 167 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 RBP4P02753 201 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 REG1AP05451 166 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 SMIM13P0DJ93 91 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms