RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 RIIAD1A6NNX1 92 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 CEBPZOSA8MTT3 80 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 C9JAW5 83 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 FAM90A26D6RGX4 464 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 CCDC179H3BU77 68 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.98□□□□□ -2.09
SKA3-207ENST00000536239 PTGESO14684 152 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 TIMM8AO60220 97 aaPredicted RBP1.98□□□□□ -2.09
SKA3-207ENST00000536239 TBL1XO60907 577 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 KLF7O75840 302 aaPredicted RBP1.98□□□□□ -2.09
SKA3-207ENST00000536239 OR2H2O95918 312 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 CXorf1O96002 111 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 MT-ATP8P03928 68 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 FGF1P05230 155 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 HPNP05981 417 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 CSN3P07498 182 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 OR5AL1P0C617 328 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 COX8AP10176 69 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 CYBAP13498 195 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 GABRG2P18507 467 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 ADRA2CP18825 462 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 FCGR2BP31994 310 aaPredicted RBP1.98□□□□□ -2.09
SKA3-207ENST00000536239 CDAP32320 146 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 ASIPP42127 132 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 KIR2DS2P43631 304 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 VDAC2P45880 294 aaPredicted RBP1.98□□□□□ -2.09
SKA3-207ENST00000536239 PSMB3P49720 205 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 DAP3P51398 398 aaKnown RBP1.98□□□□□ -2.09
SKA3-207ENST00000536239 EMP1P54849 157 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 OR1D5P58170 312 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 RPS4XP62701 263 aaKnown RBP1.98□□□□□ -2.09
SKA3-207ENST00000536239 SUPT4H1P63272 117 aaKnown RBP1.98□□□□□ -2.09
SKA3-207ENST00000536239 CX3CL1P78423 397 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 SERF2P84101 59 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 PSG4Q00888 419 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 ATP5G2Q06055 141 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 GAGE2BQ13066 116 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 PDE7AQ13946 482 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 WFDC2Q14508 124 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 ZNF74Q16587 644 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 CCL15Q16663 113 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 GAGE2EQ4V326 116 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 C6orf226Q5I0X4 101 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 PSMG4Q5JS54 123 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 TSPO2Q5TGU0 170 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 OTPQ5XKR4 325 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 FAM166AQ6J272 317 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 RASL11AQ6T310 242 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 TMEM64Q6YI46 380 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 ZNF550Q7Z398 422 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 LHFPL1Q86WI0 220 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 MED12LQ86YW9 2145 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 ZNF683Q8IZ20 524 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 TMEM123Q8N131 208 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 TPRX1Q8N7U7 411 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 LRTM2Q8N967 370 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 TMEM178AQ8NBL3 297 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 OR10G8Q8NGN5 311 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 OR10G7Q8NGN6 311 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 OR6K6Q8NGW6 343 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 TSKUQ8WUA8 353 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 CT55Q8WUE5 264 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 GTSF1Q8WW33 167 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 TMEM230Q96A57 120 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 RPEQ96AT9 228 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 FLYWCH2Q96CP2 140 aaKnown RBP1.98□□□□□ -2.09
SKA3-207ENST00000536239 TMEM101Q96IK0 257 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 OR2A5Q96R48 311 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 RAB40CQ96S21 281 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 TXNDC17Q9BRA2 123 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 PRADC1Q9BSG0 188 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 TMEM70Q9BUB7 260 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 SFXN3Q9BWM7 321 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 CLEC7AQ9BXN2 247 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 CXCL16Q9H2A7 254 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 C5orf66Q9H5L9 145 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 GNB4Q9HAV0 340 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 BCL2L10Q9HD36 194 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 GAGE2DQ9UEU5 116 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 PRO0628Q9UI54 55 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 ANAPC10Q9UM13 185 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 HIGD1AQ9Y241 93 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 LSM5Q9Y4Y9 91 aaKnown RBP1.98□□□□□ -2.09
SKA3-207ENST00000536239 YTHDF2Q9Y5A9 579 aaKnown RBP1.98□□□□□ -2.09
SKA3-207ENST00000536239 ARL2-SNX15V9GYD0 113 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 OBSL1O75147 1896 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 CPAMD8Q8IZJ3 1885 aa1.98□□□□□ -2.09
SKA3-207ENST00000536239 DOCK9Q9BZ29 2069 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 A0A087X0K7 114 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 PIGBOS1A0A0B4J2F0 54 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 TINCRA0A1B0GVN0 87 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 MDFIC2A0A1B0GVS7 189 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 C2orf70A6NJV1 201 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 ZFP92A6NM28 416 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 GGTLC3B5MD39 225 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 E9PLD3 99 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 C11orf98E9PRG8 122 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 J3QLI3 93 aa1.97□□□□□ -2.09
SKA3-207ENST00000536239 CLDN5O00501 218 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms