RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 DEFA1P59665 94 aa8.14□□□□□ -1.11
CLSTN3-206ENST00000535668 DEFA3P59666 94 aa8.14□□□□□ -1.11
CLSTN3-206ENST00000535668 NANOS2P60321 138 aaKnown RBP8.14□□□□□ -1.11
CLSTN3-206ENST00000535668 VBP1P61758 197 aa8.14□□□□□ -1.11
CLSTN3-206ENST00000535668 ERHP84090 104 aaKnown RBP8.14□□□□□ -1.11
CLSTN3-206ENST00000535668 ZNF124Q15973 351 aa8.14□□□□□ -1.11
CLSTN3-206ENST00000535668 SPANXN2Q5MJ10 180 aa8.14□□□□□ -1.11
CLSTN3-206ENST00000535668 TMEM69Q5SWH9 247 aa8.14□□□□□ -1.11
CLSTN3-206ENST00000535668 TCF24Q7RTU0 167 aa8.14□□□□□ -1.11
CLSTN3-206ENST00000535668 H2BFWTQ7Z2G1 175 aa8.14□□□□□ -1.11
CLSTN3-206ENST00000535668 LHFPL1Q86WI0 220 aa8.14□□□□□ -1.11
CLSTN3-206ENST00000535668 OR4X1Q8NH49 305 aa8.14□□□□□ -1.11
CLSTN3-206ENST00000535668 DCANP1Q8TF63 244 aa8.14□□□□□ -1.11
CLSTN3-206ENST00000535668 ST8SIA2Q92186 375 aa8.14□□□□□ -1.11
CLSTN3-206ENST00000535668 IGHV3OR16-8A0A075B7F1 116 aa8.13□□□□□ -1.11
CLSTN3-206ENST00000535668 IGHV3-21A0A0B4J1V1 117 aa8.13□□□□□ -1.11
CLSTN3-206ENST00000535668 A0A0B4J293 547 aa8.13□□□□□ -1.11
CLSTN3-206ENST00000535668 A0A1B0GVY2 172 aa8.13□□□□□ -1.11
CLSTN3-206ENST00000535668 ZNF207O43670 478 aaKnown RBP8.13□□□□□ -1.11
CLSTN3-206ENST00000535668 CA1P00915 261 aaPredicted RBP8.13□□□□□ -1.11
CLSTN3-206ENST00000535668 PMP2P02689 132 aa8.13□□□□□ -1.11
CLSTN3-206ENST00000535668 NCS1P62166 190 aa8.13□□□□□ -1.11
CLSTN3-206ENST00000535668 TBC1D26Q86UD7 250 aa8.13□□□□□ -1.11
CLSTN3-206ENST00000535668 UBAC2Q8NBM4 344 aa8.13□□□□□ -1.11
CLSTN3-206ENST00000535668 OR4A16Q8NH70 328 aa8.13□□□□□ -1.11
CLSTN3-206ENST00000535668 RNF126Q9BV68 326 aa8.13□□□□□ -1.11
CLSTN3-206ENST00000535668 HINT2Q9BX68 163 aa8.13□□□□□ -1.11
CLSTN3-206ENST00000535668 X6R8D5 127 aa8.13□□□□□ -1.11
CLSTN3-206ENST00000535668 MUC4Q99102 2169 aa8.12□□□□□ -1.11
CLSTN3-206ENST00000535668 LOC100506127A0A0U1RQW1 187 aa8.12□□□□□ -1.11
CLSTN3-206ENST00000535668 A0A1B0GU03 582 aa8.12□□□□□ -1.11
CLSTN3-206ENST00000535668 PFDN1O60925 122 aa8.12□□□□□ -1.11
CLSTN3-206ENST00000535668 CLN5O75503 358 aa8.12□□□□□ -1.11
CLSTN3-206ENST00000535668 YIF1AO95070 293 aa8.12□□□□□ -1.11
CLSTN3-206ENST00000535668 IGKV1-17P01599 117 aa8.12□□□□□ -1.11
CLSTN3-206ENST00000535668 AMBPP02760 352 aa8.12□□□□□ -1.11
CLSTN3-206ENST00000535668 RBMY1A1P0DJD3 496 aaKnown RBP8.12□□□□□ -1.11
CLSTN3-206ENST00000535668 RBMY1CP0DJD4 496 aa8.12□□□□□ -1.11
CLSTN3-206ENST00000535668 TBPP20226 339 aa8.12□□□□□ -1.11
CLSTN3-206ENST00000535668 OXA1LQ15070 435 aa8.12□□□□□ -1.11
CLSTN3-206ENST00000535668 RBMY1FQ15415 496 aaKnown RBP8.12□□□□□ -1.11
CLSTN3-206ENST00000535668 MZT2AQ6P582 158 aa8.12□□□□□ -1.11
CLSTN3-206ENST00000535668 ARRDC1Q8N5I2 433 aa8.12□□□□□ -1.11
CLSTN3-206ENST00000535668 SAMD12Q8N8I0 201 aa8.12□□□□□ -1.11
CLSTN3-206ENST00000535668 OR52E5Q8NH55 327 aa8.12□□□□□ -1.11
CLSTN3-206ENST00000535668 PUS1Q9Y606 427 aaKnown RBP eCLIP8.12□□□□□ -1.11
CLSTN3-206ENST00000535668 TRAV30A0A087WSZ9 112 aa8.11□□□□□ -1.11
CLSTN3-206ENST00000535668 MEIS3P1A6NDR6 274 aa8.11□□□□□ -1.11
CLSTN3-206ENST00000535668 ST8SIA3O43173 380 aa8.11□□□□□ -1.11
CLSTN3-206ENST00000535668 ATG12O94817 140 aa8.11□□□□□ -1.11
CLSTN3-206ENST00000535668 PTTG1O95997 202 aa8.11□□□□□ -1.11
CLSTN3-206ENST00000535668 IGKV1-5P01602 117 aa8.11□□□□□ -1.11
CLSTN3-206ENST00000535668 APOHP02749 345 aaPredicted RBP8.11□□□□□ -1.11
CLSTN3-206ENST00000535668 RNASE2P10153 161 aaKnown RBP8.11□□□□□ -1.11
CLSTN3-206ENST00000535668 NPPCP23582 126 aa8.11□□□□□ -1.11
CLSTN3-206ENST00000535668 RCVRNP35243 200 aa8.11□□□□□ -1.11
CLSTN3-206ENST00000535668 AP2S1P53680 142 aaPredicted RBP8.11□□□□□ -1.11
CLSTN3-206ENST00000535668 SUB1P53999 127 aaKnown RBP eCLIP8.11□□□□□ -1.11
CLSTN3-206ENST00000535668 DEFB131AP59861 70 aa8.11□□□□□ -1.11
CLSTN3-206ENST00000535668 TRIM16LQ309B1 348 aa8.11□□□□□ -1.11
CLSTN3-206ENST00000535668 MISP3Q96FF7 219 aa8.11□□□□□ -1.11
CLSTN3-206ENST00000535668 CLUHP3Q96NS8 147 aa8.11□□□□□ -1.11
CLSTN3-206ENST00000535668 NEU1Q99519 415 aa8.11□□□□□ -1.11
CLSTN3-206ENST00000535668 FNDC4Q9H6D8 234 aaPredicted RBP8.11□□□□□ -1.11
CLSTN3-206ENST00000535668 PKD1P98161 4303 aa8.1□□□□□ -1.11
CLSTN3-206ENST00000535668 TRAV10A0A0B4J240 114 aa8.1□□□□□ -1.11
CLSTN3-206ENST00000535668 UPK1BO75841 260 aa8.1□□□□□ -1.11
CLSTN3-206ENST00000535668 EIF4EP06730 217 aaKnown RBP8.1□□□□□ -1.11
CLSTN3-206ENST00000535668 HLA-DMAP28067 261 aa8.1□□□□□ -1.11
CLSTN3-206ENST00000535668 SNCAP37840 140 aa8.1□□□□□ -1.11
CLSTN3-206ENST00000535668 YPEL3P61236 119 aaPredicted RBP8.1□□□□□ -1.11
CLSTN3-206ENST00000535668 CCDC190Q86UF4 302 aa8.1□□□□□ -1.11
CLSTN3-206ENST00000535668 FAM219AQ8IW50 185 aa8.1□□□□□ -1.11
CLSTN3-206ENST00000535668 STHQ8IWL8 128 aa8.1□□□□□ -1.11
CLSTN3-206ENST00000535668 FAM24BQ8N5W8 94 aa8.1□□□□□ -1.11
CLSTN3-206ENST00000535668 MRGPRFQ96AM1 343 aa8.1□□□□□ -1.11
CLSTN3-206ENST00000535668 FAM210BQ96KR6 192 aa8.1□□□□□ -1.11
CLSTN3-206ENST00000535668 CACFD1Q9UGQ2 172 aa8.1□□□□□ -1.11
CLSTN3-206ENST00000535668 DYNC1H1Q14204 4646 aaKnown RBP8.09□□□□□ -1.11
CLSTN3-206ENST00000535668 IGHV4-28A0A0C4DH34 117 aa8.09□□□□□ -1.11
CLSTN3-206ENST00000535668 HELTA6NFD8 242 aa8.09□□□□□ -1.11
CLSTN3-206ENST00000535668 DNASE2O00115 360 aaPredicted RBP8.09□□□□□ -1.11
CLSTN3-206ENST00000535668 SCGB2A1O75556 95 aa8.09□□□□□ -1.11
CLSTN3-206ENST00000535668 MED14OSP0DP75 135 aa8.09□□□□□ -1.11
CLSTN3-206ENST00000535668 UCP1P25874 307 aa8.09□□□□□ -1.11
CLSTN3-206ENST00000535668 HLA-DMBP28068 263 aa8.09□□□□□ -1.11
CLSTN3-206ENST00000535668 TSPAN5P62079 268 aa8.09□□□□□ -1.11
CLSTN3-206ENST00000535668 PHLDA2Q53GA4 152 aa8.09□□□□□ -1.11
CLSTN3-206ENST00000535668 GBGT1Q8N5D6 347 aa8.09□□□□□ -1.11
CLSTN3-206ENST00000535668 METTL26Q96S19 204 aa8.09□□□□□ -1.11
CLSTN3-206ENST00000535668 FBXL17Q9UF56 701 aa8.09□□□□□ -1.11
CLSTN3-206ENST00000535668 ELOA3CA0A087WX78 387 aaPredicted RBP8.08□□□□□ -1.12
CLSTN3-206ENST00000535668 IGHV3-49A0A0A0MS15 119 aa8.08□□□□□ -1.12
CLSTN3-206ENST00000535668 CDS2O95674 445 aa8.08□□□□□ -1.12
CLSTN3-206ENST00000535668 CD74P04233 296 aa8.08□□□□□ -1.12
CLSTN3-206ENST00000535668 FCER2P06734 321 aa8.08□□□□□ -1.12
CLSTN3-206ENST00000535668 IGLC1P0CG04 106 aa8.08□□□□□ -1.12
CLSTN3-206ENST00000535668 SLC25A4P12235 298 aa8.08□□□□□ -1.12
CLSTN3-206ENST00000535668 P2RY1P47900 373 aa8.08□□□□□ -1.12
CLSTN3-206ENST00000535668 TFPI2P48307 235 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 158.7 ms