RNA–Protein interactions for RNA: ENST00000535327.5

CCDC7-207, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-207ENST00000535327 CTAG1AP78358 180 aa0.97□□□□□ -2.25
CCDC7-207ENST00000535327 CCDC90BQ9GZT6 254 aa0.97□□□□□ -2.25
CCDC7-207ENST00000535327 NHP2Q9NX24 153 aaKnown RBP0.97□□□□□ -2.25
CCDC7-207ENST00000535327 TAS2R4Q9NYW5 299 aa0.97□□□□□ -2.25
CCDC7-207ENST00000535327 PKIGQ9Y2B9 76 aa0.97□□□□□ -2.25
CCDC7-207ENST00000535327 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.96□□□□□ -2.26
CCDC7-207ENST00000535327 PROSCO94903 275 aa0.96□□□□□ -2.26
CCDC7-207ENST00000535327 SERPINA6P08185 405 aa0.96□□□□□ -2.26
CCDC7-207ENST00000535327 IMPG1Q17R60 797 aa0.96□□□□□ -2.26
CCDC7-207ENST00000535327 KRT222Q8N1A0 295 aa0.96□□□□□ -2.26
CCDC7-207ENST00000535327 OTUD6BQ8N6M0 293 aa0.96□□□□□ -2.26
CCDC7-207ENST00000535327 SIGLECL1Q8N7X8 197 aa0.96□□□□□ -2.26
CCDC7-207ENST00000535327 LINC00526Q96FQ7 95 aa0.96□□□□□ -2.26
CCDC7-207ENST00000535327 CMSS1Q9BQ75 279 aaKnown RBP0.96□□□□□ -2.26
CCDC7-207ENST00000535327 TP73-AS1Q9UF72 201 aa0.96□□□□□ -2.26
CCDC7-207ENST00000535327 TNRC6BQ9UPQ9 1833 aaKnown RBP0.95□□□□□ -2.26
CCDC7-207ENST00000535327 OR4C46A6NHA9 309 aa0.95□□□□□ -2.26
CCDC7-207ENST00000535327 CLDN24A6NM45 220 aa0.95□□□□□ -2.26
CCDC7-207ENST00000535327 CHP2O43745 196 aa0.95□□□□□ -2.26
CCDC7-207ENST00000535327 NIPSNAP2O75323 286 aa0.95□□□□□ -2.26
CCDC7-207ENST00000535327 UBL3O95164 117 aa0.95□□□□□ -2.26
CCDC7-207ENST00000535327 RBP1P09455 135 aa0.95□□□□□ -2.26
CCDC7-207ENST00000535327 MIFP14174 115 aa0.95□□□□□ -2.26
CCDC7-207ENST00000535327 ZNF93P35789 620 aaPredicted RBP0.95□□□□□ -2.26
CCDC7-207ENST00000535327 RHOGP84095 191 aa0.95□□□□□ -2.26
CCDC7-207ENST00000535327 CLDN22Q8N7P3 220 aa0.95□□□□□ -2.26
CCDC7-207ENST00000535327 C8orf76Q96K31 380 aa0.95□□□□□ -2.26
CCDC7-207ENST00000535327 CCDC42Q96M95 316 aa0.95□□□□□ -2.26
CCDC7-207ENST00000535327 TSPAN32Q96QS1 320 aa0.95□□□□□ -2.26
CCDC7-207ENST00000535327 C20orf27Q9GZN8 174 aa0.95□□□□□ -2.26
CCDC7-207ENST00000535327 OSTCQ9NRP0 149 aa0.95□□□□□ -2.26
CCDC7-207ENST00000535327 ACER3Q9NUN7 267 aa0.95□□□□□ -2.26
CCDC7-207ENST00000535327 TNRC6AQ8NDV7 1962 aaKnown RBP0.95□□□□□ -2.26
CCDC7-207ENST00000535327 MTUS2Q5JR59 1369 aa0.95□□□□□ -2.26
CCDC7-207ENST00000535327 SCN3AQ9NY46 2000 aa0.94□□□□□ -2.26
CCDC7-207ENST00000535327 ECM29Q5VYK3 1845 aa0.94□□□□□ -2.26
CCDC7-207ENST00000535327 LOC110117498A0A087WWA1 95 aa0.94□□□□□ -2.26
CCDC7-207ENST00000535327 TRAV1-1A0A0B4J248 108 aa0.94□□□□□ -2.26
CCDC7-207ENST00000535327 C2orf70A6NJV1 201 aa0.94□□□□□ -2.26
CCDC7-207ENST00000535327 SULT1B1O43704 296 aa0.94□□□□□ -2.26
CCDC7-207ENST00000535327 TTRP02766 147 aa0.94□□□□□ -2.26
CCDC7-207ENST00000535327 RPS20P60866 119 aaKnown RBP0.94□□□□□ -2.26
CCDC7-207ENST00000535327 YPEL3P61236 119 aaPredicted RBP0.94□□□□□ -2.26
CCDC7-207ENST00000535327 PDE6HQ13956 83 aa0.94□□□□□ -2.26
CCDC7-207ENST00000535327 TRAPPC5Q8IUR0 188 aa0.94□□□□□ -2.26
CCDC7-207ENST00000535327 OR6V1Q8N148 313 aa0.94□□□□□ -2.26
CCDC7-207ENST00000535327 BORCS7Q96B45 105 aa0.94□□□□□ -2.26
CCDC7-207ENST00000535327 MRPL27Q9P0M9 148 aaKnown RBP0.94□□□□□ -2.26
CCDC7-207ENST00000535327 SLC35A3Q9Y2D2 325 aa0.94□□□□□ -2.26
CCDC7-207ENST00000535327 WRNQ14191 1432 aaPredicted RBP eCLIP0.94□□□□□ -2.26
CCDC7-207ENST00000535327 TRAV26-2A0A0B4J265 109 aa0.93□□□□□ -2.26
CCDC7-207ENST00000535327 CLDN25C9JDP6 229 aa0.93□□□□□ -2.26
CCDC7-207ENST00000535327 BUB1B-PAK6H3BSN5 160 aa0.93□□□□□ -2.26
CCDC7-207ENST00000535327 OR2T1O43869 369 aa0.93□□□□□ -2.26
CCDC7-207ENST00000535327 RPP14O95059 124 aaKnown RBP0.93□□□□□ -2.26
CCDC7-207ENST00000535327 SMIM10L2AP0DMW4 78 aa0.93□□□□□ -2.26
CCDC7-207ENST00000535327 SMIM10L2BP0DMW5 78 aa0.93□□□□□ -2.26
CCDC7-207ENST00000535327 MGST1P10620 155 aaKnown RBP0.93□□□□□ -2.26
CCDC7-207ENST00000535327 CDC42P60953 191 aa0.93□□□□□ -2.26
CCDC7-207ENST00000535327 PRB3Q04118 309 aaPredicted RBP0.93□□□□□ -2.26
CCDC7-207ENST00000535327 Q8N814 137 aa0.93□□□□□ -2.26
CCDC7-207ENST00000535327 SFT2D1Q8WV19 159 aa0.93□□□□□ -2.26
CCDC7-207ENST00000535327 C4orf3Q8WVX3 66 aa0.93□□□□□ -2.26
CCDC7-207ENST00000535327 GPR146Q96CH1 333 aa0.93□□□□□ -2.26
CCDC7-207ENST00000535327 RASL12Q9NYN1 266 aa0.93□□□□□ -2.26
CCDC7-207ENST00000535327 DENND4CQ5VZ89 1909 aa0.93□□□□□ -2.26
CCDC7-207ENST00000535327 CEP192Q8TEP8 1941 aa0.93□□□□□ -2.26
CCDC7-207ENST00000535327 PLXND1Q9Y4D7 1925 aa0.92□□□□□ -2.26
CCDC7-207ENST00000535327 C19orf84I3L1E1 186 aa0.92□□□□□ -2.26
CCDC7-207ENST00000535327 CASP1P29466 404 aa0.92□□□□□ -2.26
CCDC7-207ENST00000535327 SSR2P43308 183 aa0.92□□□□□ -2.26
CCDC7-207ENST00000535327 DEFA1P59665 94 aa0.92□□□□□ -2.26
CCDC7-207ENST00000535327 RNASE10Q5GAN6 216 aaKnown RBP0.92□□□□□ -2.26
CCDC7-207ENST00000535327 ZNF418Q8TF45 676 aaPredicted RBP0.92□□□□□ -2.26
CCDC7-207ENST00000535327 DCSTAMPQ9H295 470 aa0.92□□□□□ -2.26
CCDC7-207ENST00000535327 PARVGQ9HBI0 331 aa0.92□□□□□ -2.26
CCDC7-207ENST00000535327 CYSLTR1Q9Y271 337 aa0.92□□□□□ -2.26
CCDC7-207ENST00000535327 NOSIPQ9Y314 301 aaKnown RBP0.92□□□□□ -2.26
CCDC7-207ENST00000535327 ADCY9O60503 1353 aa0.92□□□□□ -2.26
CCDC7-207ENST00000535327 C7orf71A4D174 169 aa0.91□□□□□ -2.26
CCDC7-207ENST00000535327 J3QRK9 145 aa0.91□□□□□ -2.26
CCDC7-207ENST00000535327 CT55Q8WUE5 264 aa0.91□□□□□ -2.26
CCDC7-207ENST00000535327 TRIM4Q9C037 500 aa0.91□□□□□ -2.26
CCDC7-207ENST00000535327 HS3ST2Q9Y278 367 aa0.91□□□□□ -2.26
CCDC7-207ENST00000535327 ZFP30Q9Y2G7 519 aa0.91□□□□□ -2.26
CCDC7-207ENST00000535327 SNRNP200O75643 2136 aaKnown RBP0.91□□□□□ -2.26
CCDC7-207ENST00000535327 COL4A5P29400 1685 aa0.91□□□□□ -2.26
CCDC7-207ENST00000535327 LAMB4A4D0S4 1761 aa0.91□□□□□ -2.26
CCDC7-207ENST00000535327 ZNF106Q9H2Y7 1883 aaKnown RBP0.9□□□□□ -2.26
CCDC7-207ENST00000535327 A0A087X0T9 212 aa0.9□□□□□ -2.27
CCDC7-207ENST00000535327 TRBV6-8A0A0A6YYG3 113 aa0.9□□□□□ -2.27
CCDC7-207ENST00000535327 KPNA3O00505 521 aaPredicted RBP0.9□□□□□ -2.27
CCDC7-207ENST00000535327 OR4E1P0C645 316 aa0.9□□□□□ -2.27
CCDC7-207ENST00000535327 AP3S2P59780 193 aa0.9□□□□□ -2.27
CCDC7-207ENST00000535327 IAH1Q2TAA2 248 aaPredicted RBP0.9□□□□□ -2.27
CCDC7-207ENST00000535327 GDF5OSQ5U4N7 250 aa0.9□□□□□ -2.27
CCDC7-207ENST00000535327 GDPD1Q8N9F7 314 aa0.9□□□□□ -2.27
CCDC7-207ENST00000535327 OR13D1Q8NGV5 346 aa0.9□□□□□ -2.27
CCDC7-207ENST00000535327 TEX47Q8TBZ9 253 aa0.9□□□□□ -2.27
CCDC7-207ENST00000535327 C2orf50Q96LR7 162 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms