RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 SAP30LQ9HAJ7 183 aa13.04□□□□□ -0.32
MCF2L-232ENST00000535094 MALRD1Q5VYJ5 2156 aa13.04□□□□□ -0.32
MCF2L-232ENST00000535094 SERTM2A0A1B0GWG4 89 aa13.04□□□□□ -0.32
MCF2L-232ENST00000535094 BPIFB3P59826 476 aa13.04□□□□□ -0.32
MCF2L-232ENST00000535094 SELENOTP62341 195 aa13.04□□□□□ -0.32
MCF2L-232ENST00000535094 GCSAMQ8N6F7 178 aa13.04□□□□□ -0.32
MCF2L-232ENST00000535094 ASCL2Q99929 193 aa13.04□□□□□ -0.32
MCF2L-232ENST00000535094 BOD1L1Q8NFC6 3051 aa13.04□□□□□ -0.32
MCF2L-232ENST00000535094 CORTO00230 105 aa13.03□□□□□ -0.32
MCF2L-232ENST00000535094 ISLRO14498 428 aa13.03□□□□□ -0.32
MCF2L-232ENST00000535094 AREGP15514 252 aa13.03□□□□□ -0.32
MCF2L-232ENST00000535094 TNFSF4P23510 183 aa13.03□□□□□ -0.32
MCF2L-232ENST00000535094 SRSF6Q13247 344 aaKnown RBP13.03□□□□□ -0.32
MCF2L-232ENST00000535094 BHLHA15Q7RTS1 189 aaPredicted RBP13.03□□□□□ -0.32
MCF2L-232ENST00000535094 WDR31Q8NA23 367 aa13.03□□□□□ -0.32
MCF2L-232ENST00000535094 CCL17Q92583 94 aa13.03□□□□□ -0.32
MCF2L-232ENST00000535094 SARAFQ96BY9 339 aa13.03□□□□□ -0.32
MCF2L-232ENST00000535094 OSTCQ9NRP0 149 aa13.03□□□□□ -0.32
MCF2L-232ENST00000535094 C15orf65H3BRN8 121 aa13.03□□□□□ -0.32
MCF2L-232ENST00000535094 ZNF841Q6ZN19 808 aa13.03□□□□□ -0.32
MCF2L-232ENST00000535094 OR8B3Q8NGG8 313 aa13.03□□□□□ -0.32
MCF2L-232ENST00000535094 OR52E5Q8NH55 327 aa13.03□□□□□ -0.32
MCF2L-232ENST00000535094 C21orf140B9A014 251 aa13.03□□□□□ -0.32
MCF2L-232ENST00000535094 C9JCJ5 164 aa13.03□□□□□ -0.32
MCF2L-232ENST00000535094 YPEL1O60688 119 aa13.03□□□□□ -0.32
MCF2L-232ENST00000535094 Q0VG73 95 aa13.03□□□□□ -0.32
MCF2L-232ENST00000535094 MORN5Q5VZ52 161 aa13.03□□□□□ -0.32
MCF2L-232ENST00000535094 YPEL2Q96QA6 119 aa13.03□□□□□ -0.32
MCF2L-232ENST00000535094 hDV102S1A0JD36 115 aa13.02□□□□□ -0.32
MCF2L-232ENST00000535094 OR4C46A6NHA9 309 aa13.02□□□□□ -0.32
MCF2L-232ENST00000535094 P01737 135 aa13.02□□□□□ -0.32
MCF2L-232ENST00000535094 SAA1P0DJI8 122 aaPredicted RBP13.02□□□□□ -0.32
MCF2L-232ENST00000535094 BTF3P20290 206 aaKnown RBP13.02□□□□□ -0.32
MCF2L-232ENST00000535094 TSPOP30536 169 aa13.02□□□□□ -0.32
MCF2L-232ENST00000535094 UQCRFS1P47985 274 aa13.02□□□□□ -0.32
MCF2L-232ENST00000535094 TBR1Q16650 682 aa13.02□□□□□ -0.32
MCF2L-232ENST00000535094 TMSB15BA0A087X1C1 80 aa13.02□□□□□ -0.33
MCF2L-232ENST00000535094 IZUMO1RA6ND01 250 aa13.02□□□□□ -0.33
MCF2L-232ENST00000535094 HTR1DP28221 377 aa13.02□□□□□ -0.33
MCF2L-232ENST00000535094 Q8N7P7 452 aa13.02□□□□□ -0.33
MCF2L-232ENST00000535094 SLC25A17O43808 307 aa13.02□□□□□ -0.33
MCF2L-232ENST00000535094 CCL3L1P16619 93 aa13.02□□□□□ -0.33
MCF2L-232ENST00000535094 CA7P43166 264 aa13.02□□□□□ -0.33
MCF2L-232ENST00000535094 TMEM177Q53S58 311 aa13.02□□□□□ -0.33
MCF2L-232ENST00000535094 C19orf35Q6ZS72 473 aa13.02□□□□□ -0.33
MCF2L-232ENST00000535094 WFDC8Q8IUA0 241 aa13.02□□□□□ -0.33
MCF2L-232ENST00000535094 NUDT10Q8NFP7 164 aa13.02□□□□□ -0.33
MCF2L-232ENST00000535094 NUDT11Q96G61 164 aa13.02□□□□□ -0.33
MCF2L-232ENST00000535094 MMP23AO75900 390 aa13.01□□□□□ -0.33
MCF2L-232ENST00000535094 LEPROTL1O95214 131 aa13.01□□□□□ -0.33
MCF2L-232ENST00000535094 LINC00614P0C842 121 aa13.01□□□□□ -0.33
MCF2L-232ENST00000535094 HIST1H1EP10412 219 aaKnown RBP13.01□□□□□ -0.33
MCF2L-232ENST00000535094 PAX1P15863 534 aa13.01□□□□□ -0.33
MCF2L-232ENST00000535094 COL8A1P27658 744 aa13.01□□□□□ -0.33
MCF2L-232ENST00000535094 C18orf32Q8TCD1 76 aa13.01□□□□□ -0.33
MCF2L-232ENST00000535094 COX19Q49B96 90 aa13.01□□□□□ -0.33
MCF2L-232ENST00000535094 LINC00305Q7Z4B0 112 aa13.01□□□□□ -0.33
MCF2L-232ENST00000535094 FDCSPQ8NFU4 85 aa13.01□□□□□ -0.33
MCF2L-232ENST00000535094 OR1L8Q8NGR8 309 aa13.01□□□□□ -0.33
MCF2L-232ENST00000535094 SFXN3Q9BWM7 321 aa13.01□□□□□ -0.33
MCF2L-232ENST00000535094 RNF7Q9UBF6 113 aa13.01□□□□□ -0.33
MCF2L-232ENST00000535094 MUC21A0A0G2JKD1 596 aa13.01□□□□□ -0.33
MCF2L-232ENST00000535094 MUC21A0A140T8X8 626 aa13.01□□□□□ -0.33
MCF2L-232ENST00000535094 PEX7O00628 323 aa13.01□□□□□ -0.33
MCF2L-232ENST00000535094 SUB1P53999 127 aaKnown RBP eCLIP13.01□□□□□ -0.33
MCF2L-232ENST00000535094 LYZP61626 148 aa13.01□□□□□ -0.33
MCF2L-232ENST00000535094 MUC21Q5SSG8 566 aa13.01□□□□□ -0.33
MCF2L-232ENST00000535094 KIR3DL3Q8N743 410 aa13.01□□□□□ -0.33
MCF2L-232ENST00000535094 NUP35Q8NFH5 326 aa13.01□□□□□ -0.33
MCF2L-232ENST00000535094 ALKBH7Q9BT30 221 aaPredicted RBP13.01□□□□□ -0.33
MCF2L-232ENST00000535094 TRAV9-1A0A075B6T8 112 aa13□□□□□ -0.33
MCF2L-232ENST00000535094 IGHV1-18A0A0C4DH31 117 aa13□□□□□ -0.33
MCF2L-232ENST00000535094 hADV38S2A0JD32 116 aa13□□□□□ -0.33
MCF2L-232ENST00000535094 MPV17L2Q567V2 206 aa13□□□□□ -0.33
MCF2L-232ENST00000535094 C1orf229Q6ZS94 237 aaPredicted RBP13□□□□□ -0.33
MCF2L-232ENST00000535094 ADTRPQ96IZ2 230 aa13□□□□□ -0.33
MCF2L-232ENST00000535094 MRPL20Q9BYC9 149 aaKnown RBP13□□□□□ -0.33
MCF2L-232ENST00000535094 KBTBD11-OT1A0A1B0GTJ5 212 aa13□□□□□ -0.33
MCF2L-232ENST00000535094 OR10J3Q5JRS4 329 aa13□□□□□ -0.33
MCF2L-232ENST00000535094 TEX50A0A1B0GTY4 177 aa13□□□□□ -0.33
MCF2L-232ENST00000535094 LOC389332A0A1B0GUA5 103 aa13□□□□□ -0.33
MCF2L-232ENST00000535094 KIR2DL2P43627 348 aaPredicted RBP13□□□□□ -0.33
MCF2L-232ENST00000535094 NIT1Q86X76 327 aa13□□□□□ -0.33
MCF2L-232ENST00000535094 SLC25A33Q9BSK2 321 aa13□□□□□ -0.33
MCF2L-232ENST00000535094 TMEM70Q9BUB7 260 aa13□□□□□ -0.33
MCF2L-232ENST00000535094 IGKV1OR2-108A0A075B7D4 117 aa12.99□□□□□ -0.33
MCF2L-232ENST00000535094 SRRM4A7MD48 611 aaKnown RBP12.99□□□□□ -0.33
MCF2L-232ENST00000535094 CCL25O15444 150 aa12.99□□□□□ -0.33
MCF2L-232ENST00000535094 PRNTQ86SH4 94 aa12.99□□□□□ -0.33
MCF2L-232ENST00000535094 FAM181BA6NEQ2 426 aa12.99□□□□□ -0.33
MCF2L-232ENST00000535094 SRRM5B3KS81 715 aa12.99□□□□□ -0.33
MCF2L-232ENST00000535094 RBP4P02753 201 aa12.99□□□□□ -0.33
MCF2L-232ENST00000535094 SSBP2P81877 361 aaPredicted RBP12.99□□□□□ -0.33
MCF2L-232ENST00000535094 RNASE8Q8TDE3 154 aaKnown RBP12.99□□□□□ -0.33
MCF2L-232ENST00000535094 LSM4Q9Y4Z0 139 aaKnown RBP12.99□□□□□ -0.33
MCF2L-232ENST00000535094 TRAV9-2A0A087WT02 112 aa12.99□□□□□ -0.33
MCF2L-232ENST00000535094 J3QW42 95 aa12.99□□□□□ -0.33
MCF2L-232ENST00000535094 IGLL1P15814 213 aa12.99□□□□□ -0.33
MCF2L-232ENST00000535094 ACP1P24666 158 aa12.99□□□□□ -0.33
MCF2L-232ENST00000535094 PPOXP50336 477 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms